RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 HSF2BPO75031 334 aa24.98■■□□□ 1.59
CPNE1-217ENST00000439669 ADAM23O75077 832 aa24.98■■□□□ 1.59
CPNE1-217ENST00000439669 ALDH1A2O94788 518 aa24.98■■□□□ 1.59
CPNE1-217ENST00000439669 TRUB2O95900 331 aaKnown RBP24.98■■□□□ 1.59
CPNE1-217ENST00000439669 MOCS2O96007 188 aaPredicted RBP24.98■■□□□ 1.59
CPNE1-217ENST00000439669 GLI1P08151 1106 aa24.98■■□□□ 1.59
CPNE1-217ENST00000439669 SOX5P35711 763 aa24.98■■□□□ 1.59
CPNE1-217ENST00000439669 WASP42768 502 aa24.98■■□□□ 1.59
CPNE1-217ENST00000439669 ZNF165P49910 485 aa24.98■■□□□ 1.59
CPNE1-217ENST00000439669 OLFML1Q6UWY5 402 aa24.98■■□□□ 1.59
CPNE1-217ENST00000439669 APTXQ7Z2E3 356 aaKnown RBP24.98■■□□□ 1.59
CPNE1-217ENST00000439669 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.98■■□□□ 1.59
CPNE1-217ENST00000439669 CHPFQ8IZ52 775 aa24.98■■□□□ 1.59
CPNE1-217ENST00000439669 DEFB106AQ8N104 65 aa24.98■■□□□ 1.59
CPNE1-217ENST00000439669 DCLK2Q8N568 766 aa24.98■■□□□ 1.59
CPNE1-217ENST00000439669 DDX1Q92499 740 aaKnown RBP24.98■■□□□ 1.59
CPNE1-217ENST00000439669 TMA16Q96EY4 203 aaKnown RBP24.98■■□□□ 1.59
CPNE1-217ENST00000439669 FAM204AQ9H8W3 233 aa24.98■■□□□ 1.59
CPNE1-217ENST00000439669 POLMQ9NP87 494 aaPredicted RBP24.98■■□□□ 1.59
CPNE1-217ENST00000439669 EBF1Q9UH73 591 aa24.98■■□□□ 1.59
CPNE1-217ENST00000439669 SLC27A6Q9Y2P4 619 aa24.98■■□□□ 1.59
CPNE1-217ENST00000439669 RIF1Q5UIP0 2472 aaKnown RBP24.98■■□□□ 1.59
CPNE1-217ENST00000439669 PTPRZ1P23471 2315 aaPredicted RBP24.97■■□□□ 1.59
CPNE1-217ENST00000439669 GOLGA6L7A0A1B0GV03 622 aa24.97■■□□□ 1.59
CPNE1-217ENST00000439669 SYCE3A1L190 88 aa24.97■■□□□ 1.59
CPNE1-217ENST00000439669 IRAK2O43187 625 aa24.97■■□□□ 1.59
CPNE1-217ENST00000439669 APOEP02649 317 aa24.97■■□□□ 1.59
CPNE1-217ENST00000439669 MMEP08473 750 aa24.97■■□□□ 1.59
CPNE1-217ENST00000439669 HNRNPLP14866 589 aaKnown RBP eCLIP24.97■■□□□ 1.59
CPNE1-217ENST00000439669 PTMSP20962 102 aa24.97■■□□□ 1.59
CPNE1-217ENST00000439669 HOXD9P28356 352 aaPredicted RBP24.97■■□□□ 1.59
CPNE1-217ENST00000439669 NTSR1P30989 418 aa24.97■■□□□ 1.59
CPNE1-217ENST00000439669 CDH5P33151 784 aaPredicted RBP24.97■■□□□ 1.59
CPNE1-217ENST00000439669 STAT1P42224 750 aa24.97■■□□□ 1.59
CPNE1-217ENST00000439669 JAM2P57087 298 aa24.97■■□□□ 1.59
CPNE1-217ENST00000439669 CDK17Q00537 523 aa24.97■■□□□ 1.59
CPNE1-217ENST00000439669 LAIR1Q6GTX8 287 aa24.97■■□□□ 1.59
CPNE1-217ENST00000439669 SDE2Q6IQ49 451 aa24.97■■□□□ 1.59
CPNE1-217ENST00000439669 RFWD3Q6PCD5 774 aa24.97■■□□□ 1.59
CPNE1-217ENST00000439669 ANKS1BQ7Z6G8 1248 aa24.97■■□□□ 1.59
CPNE1-217ENST00000439669 SLC39A13Q96H72 371 aa24.97■■□□□ 1.59
CPNE1-217ENST00000439669 SLC2A13Q96QE2 648 aa24.97■■□□□ 1.59
CPNE1-217ENST00000439669 ERGIC2Q96RQ1 377 aa24.97■■□□□ 1.59
CPNE1-217ENST00000439669 DDX50Q9BQ39 737 aaKnown RBP24.97■■□□□ 1.59
CPNE1-217ENST00000439669 TPSD1Q9BZJ3 242 aa24.97■■□□□ 1.59
CPNE1-217ENST00000439669 HCN2Q9UL51 889 aa24.97■■□□□ 1.59
CPNE1-217ENST00000439669 CLEC4EQ9ULY5 219 aa24.97■■□□□ 1.59
CPNE1-217ENST00000439669 GPR179Q6PRD1 2367 aa24.96■■□□□ 1.59
CPNE1-217ENST00000439669 SYNJ2BP-COX16A0A087WUM0 186 aa24.96■■□□□ 1.59
CPNE1-217ENST00000439669 LSM8O95777 96 aaKnown RBP24.96■■□□□ 1.59
CPNE1-217ENST00000439669 HOXB2P14652 356 aa24.96■■□□□ 1.59
CPNE1-217ENST00000439669 SLC6A4P31645 630 aa24.96■■□□□ 1.59
CPNE1-217ENST00000439669 PITX1P78337 314 aaPredicted RBP24.96■■□□□ 1.59
CPNE1-217ENST00000439669 SLC6A3Q01959 620 aa24.96■■□□□ 1.59
CPNE1-217ENST00000439669 GEN1Q17RS7 908 aa24.96■■□□□ 1.59
CPNE1-217ENST00000439669 FAM133BQ5BKY9 247 aaKnown RBP24.96■■□□□ 1.59
CPNE1-217ENST00000439669 MDGA1Q8NFP4 955 aa24.96■■□□□ 1.59
CPNE1-217ENST00000439669 SLC20A1Q8WUM9 679 aa24.96■■□□□ 1.59
CPNE1-217ENST00000439669 AZIN2Q96A70 460 aa24.96■■□□□ 1.59
CPNE1-217ENST00000439669 ACOX2Q99424 681 aa24.96■■□□□ 1.59
CPNE1-217ENST00000439669 FUCA2Q9BTY2 467 aa24.96■■□□□ 1.59
CPNE1-217ENST00000439669 SLC2A11Q9BYW1 496 aa24.96■■□□□ 1.59
CPNE1-217ENST00000439669 COX16Q9P0S2 106 aa24.96■■□□□ 1.59
CPNE1-217ENST00000439669 BCCIPQ9P287 314 aaKnown RBP eCLIP24.96■■□□□ 1.595e-7■■■□□ 17.8
CPNE1-217ENST00000439669 VPS13AQ96RL7 3174 aa24.96■■□□□ 1.59
CPNE1-217ENST00000439669 MYO18AQ92614 2054 aaKnown RBP24.95■■□□□ 1.59
CPNE1-217ENST00000439669 TCRBV21S2A2A0A5A6 115 aa24.95■■□□□ 1.58
CPNE1-217ENST00000439669 GFRA2O00451 464 aa24.95■■□□□ 1.58
CPNE1-217ENST00000439669 DAB1O75553 588 aa24.95■■□□□ 1.58
CPNE1-217ENST00000439669 SGSHP51688 502 aa24.95■■□□□ 1.58
CPNE1-217ENST00000439669 ZC3H12AQ5D1E8 599 aaKnown RBP24.95■■□□□ 1.58
CPNE1-217ENST00000439669 NADSYN1Q6IA69 706 aa24.95■■□□□ 1.58
CPNE1-217ENST00000439669 SLC26A9Q7LBE3 791 aa24.95■■□□□ 1.58
CPNE1-217ENST00000439669 RASSF3Q86WH2 238 aa24.95■■□□□ 1.58
CPNE1-217ENST00000439669 ERICH1Q86X53 443 aa24.95■■□□□ 1.58
CPNE1-217ENST00000439669 ZDHHC17Q8IUH5 632 aa24.95■■□□□ 1.58
CPNE1-217ENST00000439669 MSANTD4Q8NCY6 345 aa24.95■■□□□ 1.58
CPNE1-217ENST00000439669 UCMAQ8WVF2 138 aa24.95■■□□□ 1.58
CPNE1-217ENST00000439669 HMGB4Q8WW32 186 aa24.95■■□□□ 1.58
CPNE1-217ENST00000439669 DDIT4Q9NX09 232 aa24.95■■□□□ 1.58
CPNE1-217ENST00000439669 NOCTQ9UK39 431 aaKnown RBP24.95■■□□□ 1.58
CPNE1-217ENST00000439669 MYO15AQ9UKN7 3530 aa24.94■■□□□ 1.58
CPNE1-217ENST00000439669 OTOGLQ3ZCN5 2332 aa24.94■■□□□ 1.58
CPNE1-217ENST00000439669 TYW5A2RUC4 315 aaKnown RBP24.94■■□□□ 1.58
CPNE1-217ENST00000439669 TBL1XO60907 577 aa24.94■■□□□ 1.58
CPNE1-217ENST00000439669 IGLV3-25P01717 112 aa24.94■■□□□ 1.58
CPNE1-217ENST00000439669 PIK3R6Q5UE93 754 aa24.94■■□□□ 1.58
CPNE1-217ENST00000439669 NAA35Q5VZE5 725 aa24.94■■□□□ 1.58
CPNE1-217ENST00000439669 CACNA2D4Q7Z3S7 1137 aa24.94■■□□□ 1.58
CPNE1-217ENST00000439669 ZNF677Q86XU0 584 aa24.94■■□□□ 1.58
CPNE1-217ENST00000439669 PGBD3Q8N328 593 aa24.94■■□□□ 1.58
CPNE1-217ENST00000439669 FAM160A2Q8N612 972 aaPredicted RBP24.94■■□□□ 1.58
CPNE1-217ENST00000439669 C18orf8Q96DM3 657 aa24.94■■□□□ 1.58
CPNE1-217ENST00000439669 CIPCQ9C0C6 399 aa24.94■■□□□ 1.58
CPNE1-217ENST00000439669 NUCKS1Q9H1E3 243 aaKnown RBP24.94■■□□□ 1.58
CPNE1-217ENST00000439669 CACNA2D2Q9NY47 1150 aa24.94■■□□□ 1.58
CPNE1-217ENST00000439669 STIM2Q9P246 746 aa24.94■■□□□ 1.58
CPNE1-217ENST00000439669 GBP1P32455 592 aa24.93■■□□□ 1.58
CPNE1-217ENST00000439669 NOMO3P69849 1222 aa24.93■■□□□ 1.58
CPNE1-217ENST00000439669 CDR2Q01850 454 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms