RNA–Protein interactions for RNA: ENST00000438356.1

RBM33-208, Transcript of RNA binding motif protein 33, human

TSL 4

Gene RBM33, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM33-208	ENST00000438356	RNF34	Q969K3	372 aa		12.56	□□□□□ -0.4
RBM33-208	ENST00000438356	IQCD	Q96DY2	449 aa		12.56	□□□□□ -0.4
RBM33-208	ENST00000438356	NAP1L5	Q96NT1	182 aa	Predicted RBP	12.56	□□□□□ -0.4
RBM33-208	ENST00000438356	CPXM1	Q96SM3	734 aa		12.56	□□□□□ -0.4
RBM33-208	ENST00000438356	PNKP	Q96T60	521 aa		12.56	□□□□□ -0.4
RBM33-208	ENST00000438356	DDX50	Q9BQ39	737 aa	Known RBP	12.56	□□□□□ -0.4
RBM33-208	ENST00000438356	BBS2	Q9BXC9	721 aa		12.56	□□□□□ -0.4
RBM33-208	ENST00000438356	FAM204A	Q9H8W3	233 aa		12.56	□□□□□ -0.4
RBM33-208	ENST00000438356	SEMA4G	Q9NTN9	838 aa		12.56	□□□□□ -0.4
RBM33-208	ENST00000438356	ASNSD1	Q9NWL6	643 aa		12.56	□□□□□ -0.4
RBM33-208	ENST00000438356	DEC1	Q9P2X7	70 aa		12.56	□□□□□ -0.4
RBM33-208	ENST00000438356	SLC12A6	Q9UHW9	1150 aa		12.56	□□□□□ -0.4
RBM33-208	ENST00000438356	CYTH4	Q9UIA0	394 aa		12.56	□□□□□ -0.4
RBM33-208	ENST00000438356	SLC8A2	Q9UPR5	921 aa		12.56	□□□□□ -0.4
RBM33-208	ENST00000438356	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	TYW5	A2RUC4	315 aa	Known RBP	12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	NEDD8-MDP1	E9PL57	170 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356		K7EQS6	105 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	AXIN1	O15169	862 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	HOXC11	O43248	304 aa	Predicted RBP	12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	RPP40	O75818	363 aa	Known RBP	12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	LATS1	O95835	1130 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	APOE	P02649	317 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	MME	P08473	750 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	SLC2A3	P11169	496 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	HNRNPL	P14866	589 aa	Known RBP eCLIP	12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	HOXA6	P31267	233 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	CDH5	P33151	784 aa	Predicted RBP	12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	GRIA2	P42262	883 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	NSF	P46459	744 aa	Known RBP	12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	SLC6A3	Q01959	620 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	LMNB2	Q03252	620 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	NNT	Q13423	1086 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	DMC1	Q14565	340 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	NR1I3	Q14994	352 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	ASIC2	Q16515	512 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	DCAF6	Q58WW2	860 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	NAA35	Q5VZE5	725 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	PRR23C	Q6ZRP0	262 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	CCDC117	Q8IWD4	279 aa	Predicted RBP	12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	WDTC1	Q8N5D0	677 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	NAT16	Q8N8M0	369 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	DQX1	Q8TE96	717 aa	Known RBP	12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	DDI1	Q8WTU0	396 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	GAB3	Q8WWW8	586 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	EDEM3	Q9BZQ6	932 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	ARHGEF4	Q9NR80	690 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	RXFP3	Q9NSD7	469 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	DNAJC17	Q9NVM6	304 aa	Known RBP	12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	TMEM51	Q9NW97	253 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	CDV3	Q9UKY7	258 aa	Known RBP	12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	AGO1	Q9UL18	857 aa	Known RBP	12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	STAP1	Q9ULZ2	295 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	NAALADL1	Q9UQQ1	740 aa		12.55	□□□□□ -0.4
RBM33-208	ENST00000438356	MYOF	Q9NZM1	2061 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	TBC1D3B	A6NDS4	549 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	MSI1	O43347	362 aa	Known RBP	12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	KAT7	O95251	611 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	ERBB2	P04626	1255 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	CHRM1	P11229	460 aa	Predicted RBP	12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	TYR	P14679	529 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	CNR2	P34972	360 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	RNASE9	P60153	205 aa	Known RBP	12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	KDSR	Q06136	332 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	RING1	Q06587	406 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	MTA1	Q13330	715 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	SF3A2	Q15428	464 aa	Known RBP	12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	PTPN20	Q4JDL3	420 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	C2orf27A	Q580R0	203 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	FAM102A	Q5T9C2	384 aa	Predicted RBP	12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	SFMBT2	Q5VUG0	894 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	GRAMD4	Q6IC98	578 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	PPP1R2P3	Q6NXS1	205 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356		Q6ZNB5	142 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	FAM183BP	Q6ZVS7	135 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	SND1	Q7KZF4	910 aa	Known RBP eCLIP	12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	SLC26A9	Q7LBE3	791 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	TMEM25	Q86YD3	366 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	DEFB106A	Q8N104	65 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	CCDC33	Q8N5R6	958 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	USP33	Q8TEY7	942 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	SLC20A1	Q8WUM9	679 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	CPA5	Q8WXQ8	436 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	DDX1	Q92499	740 aa	Known RBP	12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	BHMT	Q93088	406 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	ACD	Q96AP0	544 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	TPSD1	Q9BZJ3	242 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	NUCKS1	Q9H1E3	243 aa	Known RBP	12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	ARRDC1-AS1	Q9H2J1	176 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	RRN3	Q9NYV6	651 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	MARK1	Q9P0L2	795 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	IFNK	Q9P0W0	207 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	NOCT	Q9UK39	431 aa	Known RBP	12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	INVS	Q9Y283	1065 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	TLR6	Q9Y2C9	796 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	PAXBP1	Q9Y5B6	917 aa		12.54	□□□□□ -0.4
RBM33-208	ENST00000438356	SYNJ2BP-COX16	A0A087WUM0	186 aa		12.53	□□□□□ -0.4
RBM33-208	ENST00000438356	GOLGA8S	H3BPF8	625 aa		12.53	□□□□□ -0.4
RBM33-208	ENST00000438356	TRIM24	O15164	1050 aa		12.53	□□□□□ -0.4
RBM33-208	ENST00000438356	GREM1	O60565	184 aa		12.53	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms