RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 ALDH1L2Q3SY69 923 aa7.96□□□□□ -1.14
PTPRK-212ENST00000434424 TBRG1Q3YBR2 411 aa7.96□□□□□ -1.14
PTPRK-212ENST00000434424 ARHGAP40Q5TG30 622 aa7.96□□□□□ -1.14
PTPRK-212ENST00000434424 ARMC3Q5W041 872 aa7.96□□□□□ -1.14
PTPRK-212ENST00000434424 GPR135Q8IZ08 494 aa7.96□□□□□ -1.14
PTPRK-212ENST00000434424 CARFQ8N187 725 aa7.96□□□□□ -1.14
PTPRK-212ENST00000434424 FSTL5Q8N475 847 aaPredicted RBP7.96□□□□□ -1.14
PTPRK-212ENST00000434424 ANKRD44Q8N8A2 993 aa7.96□□□□□ -1.14
PTPRK-212ENST00000434424 TMEM171Q8WVE6 324 aa7.96□□□□□ -1.14
PTPRK-212ENST00000434424 ZBTB45Q96K62 511 aaPredicted RBP7.96□□□□□ -1.14
PTPRK-212ENST00000434424 WDR24Q96S15 920 aa7.96□□□□□ -1.14
PTPRK-212ENST00000434424 AP1M1Q9BXS5 423 aa7.96□□□□□ -1.14
PTPRK-212ENST00000434424 CCDC134Q9H6E4 229 aa7.96□□□□□ -1.14
PTPRK-212ENST00000434424 TBC1D29Q9UFV1 150 aa7.96□□□□□ -1.14
PTPRK-212ENST00000434424 LRP5O75197 1615 aa7.96□□□□□ -1.14
PTPRK-212ENST00000434424 CCDC78A2IDD5 438 aa7.95□□□□□ -1.14
PTPRK-212ENST00000434424 SYNDIG1LA6NDD5 238 aa7.95□□□□□ -1.14
PTPRK-212ENST00000434424 E7ENX8 843 aa7.95□□□□□ -1.14
PTPRK-212ENST00000434424 PRICKLE3O43900 615 aaPredicted RBP7.95□□□□□ -1.14
PTPRK-212ENST00000434424 SCGB1D1O95968 90 aa7.95□□□□□ -1.14
PTPRK-212ENST00000434424 PPIFP30405 207 aaKnown RBP7.95□□□□□ -1.14
PTPRK-212ENST00000434424 UQCRC1P31930 480 aa7.95□□□□□ -1.14
PTPRK-212ENST00000434424 TERF1P54274 439 aa7.95□□□□□ -1.14
PTPRK-212ENST00000434424 TAP2Q03519 686 aa7.95□□□□□ -1.14
PTPRK-212ENST00000434424 FHL3Q13643 280 aa7.95□□□□□ -1.14
PTPRK-212ENST00000434424 EIF4A2Q14240 407 aaKnown RBP7.95□□□□□ -1.14
PTPRK-212ENST00000434424 CCDC184Q52MB2 194 aa7.95□□□□□ -1.14
PTPRK-212ENST00000434424 ZNF484Q5JVG2 852 aa7.95□□□□□ -1.14
PTPRK-212ENST00000434424 RGS7BPQ6MZT1 257 aaPredicted RBP7.95□□□□□ -1.14
PTPRK-212ENST00000434424 MSANTD2Q6P1R3 559 aa7.95□□□□□ -1.14
PTPRK-212ENST00000434424 FSIP1Q8NA03 581 aa7.95□□□□□ -1.14
PTPRK-212ENST00000434424 OR52N2Q8NGI0 321 aa7.95□□□□□ -1.14
PTPRK-212ENST00000434424 SUN3Q8TAQ9 357 aa7.95□□□□□ -1.14
PTPRK-212ENST00000434424 ST8SIA2Q92186 375 aa7.95□□□□□ -1.14
PTPRK-212ENST00000434424 MECRQ9BV79 373 aa7.95□□□□□ -1.14
PTPRK-212ENST00000434424 VSX1Q9NZR4 365 aaPredicted RBP7.95□□□□□ -1.14
PTPRK-212ENST00000434424 CNOT7Q9UIV1 285 aaKnown RBP7.95□□□□□ -1.14
PTPRK-212ENST00000434424 NEU2Q9Y3R4 380 aa7.95□□□□□ -1.14
PTPRK-212ENST00000434424 VPS8Q8N3P4 1428 aa7.95□□□□□ -1.14
PTPRK-212ENST00000434424 MYOM2P54296 1465 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 CHD2O14647 1828 aaKnown RBP7.94□□□□□ -1.14
PTPRK-212ENST00000434424 UNC13BO14795 1591 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 NHSL1Q5SYE7 1610 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 TOR1BO14657 336 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 KIAA0355O15063 1070 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 B4GALT4O60513 344 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 MFAP3LO75121 409 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 PTP4A3O75365 173 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 URI1O94763 535 aaPredicted RBP7.94□□□□□ -1.14
PTPRK-212ENST00000434424 HSPA1AP0DMV8 641 aaKnown RBP7.94□□□□□ -1.14
PTPRK-212ENST00000434424 HSPA1BP0DMV9 641 aaKnown RBP7.94□□□□□ -1.14
PTPRK-212ENST00000434424 AKR1B1P15121 316 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 EPHA3P29320 983 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 SEC23BQ15437 767 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 METTL24Q5JXM2 366 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 SFRP4Q6FHJ7 346 aaPredicted RBP7.94□□□□□ -1.14
PTPRK-212ENST00000434424 CLEC9AQ6UXN8 241 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 SYNE3Q6ZMZ3 975 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 CPLX4Q7Z7G2 160 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 LRRC71Q8N4P6 559 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.94□□□□□ -1.14
PTPRK-212ENST00000434424 FAM71DQ8N9W8 422 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 RBM17Q96I25 401 aaKnown RBP7.94□□□□□ -1.14
PTPRK-212ENST00000434424 DPYSL5Q9BPU6 564 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 FUZQ9BT04 418 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 RMI1Q9H9A7 625 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 PLEKHA2Q9HB19 425 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 PLA2G3Q9NZ20 509 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 CTTNBP2NLQ9P2B4 639 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 HECAQ9UBI9 543 aaPredicted RBP7.94□□□□□ -1.14
PTPRK-212ENST00000434424 OAZ3Q9UMX2 235 aa7.94□□□□□ -1.14
PTPRK-212ENST00000434424 ADM5C9JUS6 153 aa7.93□□□□□ -1.14
PTPRK-212ENST00000434424 H3BNC9 293 aa7.93□□□□□ -1.14
PTPRK-212ENST00000434424 AGPSO00116 658 aa7.93□□□□□ -1.14
PTPRK-212ENST00000434424 CDC14BO60729 498 aa7.93□□□□□ -1.14
PTPRK-212ENST00000434424 GUCY1B2O75343 617 aa7.93□□□□□ -1.14
PTPRK-212ENST00000434424 IPO13O94829 963 aaKnown RBP7.93□□□□□ -1.14
PTPRK-212ENST00000434424 HLA-DOAP06340 250 aa7.93□□□□□ -1.14
PTPRK-212ENST00000434424 CYP21A2P08686 494 aa7.93□□□□□ -1.14
PTPRK-212ENST00000434424 ACADMP11310 421 aa7.93□□□□□ -1.14
PTPRK-212ENST00000434424 HOXD13P35453 343 aa7.93□□□□□ -1.14
PTPRK-212ENST00000434424 GSTM5P46439 218 aa7.93□□□□□ -1.14
PTPRK-212ENST00000434424 SLURP1P55000 103 aa7.93□□□□□ -1.14
PTPRK-212ENST00000434424 NFIL3Q16649 462 aa7.93□□□□□ -1.14
PTPRK-212ENST00000434424 FAM69AQ5T7M9 428 aa7.93□□□□□ -1.14
PTPRK-212ENST00000434424 SNX30Q5VWJ9 437 aa7.93□□□□□ -1.14
PTPRK-212ENST00000434424 LIPMQ5VYY2 423 aa7.93□□□□□ -1.14
PTPRK-212ENST00000434424 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.93□□□□□ -1.14
PTPRK-212ENST00000434424 H1FNTQ75WM6 255 aaPredicted RBP7.93□□□□□ -1.14
PTPRK-212ENST00000434424 DIS3L2Q8IYB7 885 aaKnown RBP7.93□□□□□ -1.14
PTPRK-212ENST00000434424 ZNF483Q8TF39 744 aaPredicted RBP7.93□□□□□ -1.14
PTPRK-212ENST00000434424 CUL5Q93034 780 aa7.93□□□□□ -1.14
PTPRK-212ENST00000434424 MCRS1Q96EZ8 462 aa7.93□□□□□ -1.14
PTPRK-212ENST00000434424 REXO5Q96IC2 774 aaKnown RBP7.93□□□□□ -1.14
PTPRK-212ENST00000434424 EIF3CQ99613 913 aaKnown RBP7.93□□□□□ -1.14
PTPRK-212ENST00000434424 SERHL2Q9H4I8 314 aa7.93□□□□□ -1.14
PTPRK-212ENST00000434424 EIF2B3Q9NR50 452 aaKnown RBP7.93□□□□□ -1.14
PTPRK-212ENST00000434424 HSFX1Q9UBD0 423 aa7.93□□□□□ -1.14
PTPRK-212ENST00000434424 ZBTB1Q9Y2K1 713 aa7.93□□□□□ -1.14
PTPRK-212ENST00000434424 SLC27A6Q9Y2P4 619 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms