RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 RAD54BQ9Y620 910 aa19.19■□□□□ 0.66
GPC1-205ENST00000427506 STON1Q9Y6Q2 735 aa19.19■□□□□ 0.66
GPC1-205ENST00000427506 SPTBN4Q9H254 2564 aa19.18■□□□□ 0.66
GPC1-205ENST00000427506 BCLAF3A2AJT9 711 aaKnown RBP19.18■□□□□ 0.66
GPC1-205ENST00000427506 WASH3PC4AMC7 463 aa19.18■□□□□ 0.66
GPC1-205ENST00000427506 HOXD9P28356 352 aaPredicted RBP19.18■□□□□ 0.66
GPC1-205ENST00000427506 RING1Q06587 406 aa19.18■□□□□ 0.66
GPC1-205ENST00000427506 STARD3Q14849 445 aa19.18■□□□□ 0.66
GPC1-205ENST00000427506 MIIPQ5JXC2 388 aa19.18■□□□□ 0.66
GPC1-205ENST00000427506 PLA2G2CQ5R387 149 aa19.18■□□□□ 0.66
GPC1-205ENST00000427506 KIAA1211LQ6NV74 962 aa19.18■□□□□ 0.66
GPC1-205ENST00000427506 CYP2U1Q7Z449 544 aa19.18■□□□□ 0.66
GPC1-205ENST00000427506 TMEM110Q86TL2 294 aa19.18■□□□□ 0.66
GPC1-205ENST00000427506 PASD1Q8IV76 773 aa19.18■□□□□ 0.66
GPC1-205ENST00000427506 FRMD1Q8N878 549 aa19.18■□□□□ 0.66
GPC1-205ENST00000427506 DQX1Q8TE96 717 aaKnown RBP19.18■□□□□ 0.66
GPC1-205ENST00000427506 SIX2Q9NPC8 291 aa19.18■□□□□ 0.66
GPC1-205ENST00000427506 ELOVL2Q9NXB9 296 aa19.18■□□□□ 0.66
GPC1-205ENST00000427506 CALCOCO1Q9P1Z2 691 aa19.18■□□□□ 0.66
GPC1-205ENST00000427506 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.17■□□□□ 0.66
GPC1-205ENST00000427506 GOLGA6L7A0A1B0GV03 622 aa19.17■□□□□ 0.66
GPC1-205ENST00000427506 NPC1O15118 1278 aa19.17■□□□□ 0.66
GPC1-205ENST00000427506 PAPSS1O43252 624 aaPredicted RBP19.17■□□□□ 0.66
GPC1-205ENST00000427506 ACSL4O60488 711 aa19.17■□□□□ 0.66
GPC1-205ENST00000427506 IGLV3-27P01718 113 aa19.17■□□□□ 0.66
GPC1-205ENST00000427506 FYNP06241 537 aa19.17■□□□□ 0.66
GPC1-205ENST00000427506 KRT9P35527 623 aa19.17■□□□□ 0.66
GPC1-205ENST00000427506 PDCLQ13371 301 aa19.17■□□□□ 0.66
GPC1-205ENST00000427506 EIF4HQ15056 248 aaKnown RBP19.17■□□□□ 0.66
GPC1-205ENST00000427506 MAP7D1Q3KQU3 841 aa19.17■□□□□ 0.66
GPC1-205ENST00000427506 RFWD3Q6PCD5 774 aa19.17■□□□□ 0.66
GPC1-205ENST00000427506 ARMCX6Q7L4S7 300 aa19.17■□□□□ 0.66
GPC1-205ENST00000427506 TMEFF1Q8IYR6 380 aa19.17■□□□□ 0.66
GPC1-205ENST00000427506 ADAM32Q8TC27 787 aa19.17■□□□□ 0.66
GPC1-205ENST00000427506 GPT2Q8TD30 523 aa19.17■□□□□ 0.66
GPC1-205ENST00000427506 DDX50Q9BQ39 737 aaKnown RBP19.17■□□□□ 0.66
GPC1-205ENST00000427506 POPDC2Q9HBU9 364 aa19.17■□□□□ 0.66
GPC1-205ENST00000427506 THAP10Q9P2Z0 257 aaPredicted RBP19.17■□□□□ 0.66
GPC1-205ENST00000427506 AJAP1Q9UKB5 411 aaPredicted RBP19.17■□□□□ 0.66
GPC1-205ENST00000427506 TLR6Q9Y2C9 796 aa19.17■□□□□ 0.66
GPC1-205ENST00000427506 NFE2L3Q9Y4A8 694 aa19.17■□□□□ 0.66
GPC1-205ENST00000427506 DCDC2BA2VCK2 349 aa19.16■□□□□ 0.66
GPC1-205ENST00000427506 FOXN3O00409 490 aaPredicted RBP19.16■□□□□ 0.66
GPC1-205ENST00000427506 SLC30A4O14863 429 aa19.16■□□□□ 0.66
GPC1-205ENST00000427506 TIMM44O43615 452 aa19.16■□□□□ 0.66
GPC1-205ENST00000427506 TBL1XO60907 577 aa19.16■□□□□ 0.66
GPC1-205ENST00000427506 PNMA6AP0CW24 399 aaPredicted RBP19.16■□□□□ 0.66
GPC1-205ENST00000427506 NDUFV2P19404 249 aa19.16■□□□□ 0.66
GPC1-205ENST00000427506 EEF1GP26641 437 aaKnown RBP19.16■□□□□ 0.66
GPC1-205ENST00000427506 IL12RB1P42701 662 aa19.16■□□□□ 0.66
GPC1-205ENST00000427506 YWHAZP63104 245 aaKnown RBP19.16■□□□□ 0.66
GPC1-205ENST00000427506 RAPGEF1Q13905 1077 aa19.16■□□□□ 0.66
GPC1-205ENST00000427506 TCP11X2Q5H9J9 407 aa19.16■□□□□ 0.66
GPC1-205ENST00000427506 SYPL2Q5VXT5 272 aa19.16■□□□□ 0.66
GPC1-205ENST00000427506 PPP1R13BQ96KQ4 1090 aa19.16■□□□□ 0.66
GPC1-205ENST00000427506 NOX5Q96PH1 765 aa19.16■□□□□ 0.66
GPC1-205ENST00000427506 PDCL3Q9H2J4 239 aa19.16■□□□□ 0.66
GPC1-205ENST00000427506 MBD1Q9UIS9 605 aaPredicted RBP19.16■□□□□ 0.66
GPC1-205ENST00000427506 PCDHGC3Q9UN70 934 aa19.16■□□□□ 0.66
GPC1-205ENST00000427506 RALGAPA1Q6GYQ0 2036 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 TYW5A2RUC4 315 aaKnown RBP19.15■□□□□ 0.66
GPC1-205ENST00000427506 IRAK2O43187 625 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 SYNCRIPO60506 623 aaKnown RBP19.15■□□□□ 0.66
GPC1-205ENST00000427506 ZNF217O75362 1048 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 MOCS2O96007 188 aaPredicted RBP19.15■□□□□ 0.66
GPC1-205ENST00000427506 SGSHP51688 502 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 BPIFB4P59827 614 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 NNTQ13423 1086 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 ZNF234Q14588 700 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 PIK3R6Q5UE93 754 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 IL31Q6EBC2 164 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 SMYD5Q6GMV2 418 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 TCEAL6Q6IPX3 200 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 SASS6Q6UVJ0 657 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 KIAA1324Q6UXG2 1013 aaKnown RBP19.15■□□□□ 0.66
GPC1-205ENST00000427506 SLC36A4Q6YBV0 504 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 CHST9Q7L1S5 443 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 BEND5Q7L4P6 421 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 TAC4Q86UU9 113 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 SLC47A2Q86VL8 602 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 WDTC1Q8N5D0 677 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 ENOX1Q8TC92 643 aaKnown RBP19.15■□□□□ 0.66
GPC1-205ENST00000427506 WFIKKN2Q8TEU8 576 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 SORCS1Q8WY21 1168 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 PIGKQ92643 395 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 TCEAL3Q969E4 200 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 AZIN2Q96A70 460 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 FCRL2Q96LA5 508 aaPredicted RBP19.15■□□□□ 0.66
GPC1-205ENST00000427506 CPXM1Q96SM3 734 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 IRX2Q9BZI1 471 aaPredicted RBP19.15■□□□□ 0.66
GPC1-205ENST00000427506 LHX5Q9H2C1 402 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 ABCB8Q9NUT2 735 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 STIM2Q9P246 746 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 TJP2Q9UDY2 1190 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 CYP8B1Q9UNU6 501 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 CEP83Q9Y592 693 aa19.15■□□□□ 0.66
GPC1-205ENST00000427506 AP5Z1O43299 807 aa19.14■□□□□ 0.65
GPC1-205ENST00000427506 APOEP02649 317 aa19.14■□□□□ 0.65
GPC1-205ENST00000427506 TPM2P07951 284 aa19.14■□□□□ 0.65
GPC1-205ENST00000427506 HLA-FP30511 346 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms