RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 COG7P83436 770 aa13.57□□□□□ -0.24
VRK3-203ENST00000424804 PDE4CQ08493 712 aa13.57□□□□□ -0.24
VRK3-203ENST00000424804 GOLGA8FQ08AF8 430 aa13.57□□□□□ -0.24
VRK3-203ENST00000424804 GOLGA8DPQ0D2H9 430 aa13.57□□□□□ -0.24
VRK3-203ENST00000424804 TRIP4Q15650 581 aaPredicted RBP13.57□□□□□ -0.24
VRK3-203ENST00000424804 FOXR2Q6PJQ5 311 aa13.57□□□□□ -0.24
VRK3-203ENST00000424804 SASS6Q6UVJ0 657 aa13.57□□□□□ -0.24
VRK3-203ENST00000424804 UNQ6494/PRO21346Q6UXR6 183 aa13.57□□□□□ -0.24
VRK3-203ENST00000424804 RRAGAQ7L523 313 aa13.57□□□□□ -0.24
VRK3-203ENST00000424804 CPXM2Q8N436 756 aa13.57□□□□□ -0.24
VRK3-203ENST00000424804 TTC39CQ8N584 583 aa13.57□□□□□ -0.24
VRK3-203ENST00000424804 CEP76Q8TAP6 659 aa13.57□□□□□ -0.24
VRK3-203ENST00000424804 SCNM1Q9BWG6 230 aa13.57□□□□□ -0.24
VRK3-203ENST00000424804 ITM2CQ9NQX7 267 aa13.57□□□□□ -0.24
VRK3-203ENST00000424804 DNAAF2Q9NVR5 837 aaKnown RBP13.57□□□□□ -0.24
VRK3-203ENST00000424804 WSB2Q9NYS7 404 aaPredicted RBP13.57□□□□□ -0.24
VRK3-203ENST00000424804 RASAL2Q9UJF2 1139 aa13.57□□□□□ -0.24
VRK3-203ENST00000424804 ZNF510Q9Y2H8 683 aa13.57□□□□□ -0.24
VRK3-203ENST00000424804 PCDHB4Q9Y5E5 795 aa13.57□□□□□ -0.24
VRK3-203ENST00000424804 MUC22E2RYF6 1773 aaPredicted RBP13.57□□□□□ -0.24
VRK3-203ENST00000424804 ZFYVE26Q68DK2 2539 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 SPAARA0A1B0GVQ0 90 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 ARHGAP33O14559 1287 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 MBD3O95983 291 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 CAPNS1P04632 268 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 TBXAS1P24557 533 aaPredicted RBP13.56□□□□□ -0.24
VRK3-203ENST00000424804 MAOBP27338 520 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 TKTL1P51854 596 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 YWHAGP61981 247 aaKnown RBP eCLIP13.56□□□□□ -0.24
VRK3-203ENST00000424804 BNC1Q01954 994 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 SDE2Q6IQ49 451 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 KIAA0907Q7Z7F0 614 aaPredicted RBP13.56□□□□□ -0.24
VRK3-203ENST00000424804 DENND1CQ8IV53 801 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 EHBP1Q8NDI1 1231 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 C1orf216Q8TAB5 229 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 SORCS1Q8WY21 1168 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 DNASE2BQ8WZ79 361 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 KAT5Q92993 513 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 HSPA12BQ96MM6 686 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 MED15Q96RN5 788 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 ZSWIM1Q9BR11 485 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 CRACR2AQ9BSW2 395 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 ADAM33Q9BZ11 813 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 ULBP1Q9BZM6 244 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 DCLK3Q9C098 648 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 FAM124BQ9H5Z6 455 aaPredicted RBP13.56□□□□□ -0.24
VRK3-203ENST00000424804 ELOVL2Q9NXB9 296 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 MARCH2Q9P0N8 246 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 STOML2Q9UJZ1 356 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 RALYQ9UKM9 306 aaKnown RBP13.56□□□□□ -0.24
VRK3-203ENST00000424804 PKD1L2Q7Z442 2459 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 PLXNB3Q9ULL4 1909 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 CABIN1Q9Y6J0 2220 aa13.56□□□□□ -0.24
VRK3-203ENST00000424804 FAM208BQ5VWN6 2430 aa13.55□□□□□ -0.24
VRK3-203ENST00000424804 SLC12A8A0AV02 714 aa13.55□□□□□ -0.24
VRK3-203ENST00000424804 FAM221BA6H8Z2 402 aa13.55□□□□□ -0.24
VRK3-203ENST00000424804 YJEFN3A6XGL0 299 aa13.55□□□□□ -0.24
VRK3-203ENST00000424804 E7ENQ6 273 aa13.55□□□□□ -0.24
VRK3-203ENST00000424804 RNF225M0QZC1 329 aaPredicted RBP13.55□□□□□ -0.24
VRK3-203ENST00000424804 XPO1O14980 1071 aaKnown RBP13.55□□□□□ -0.24
VRK3-203ENST00000424804 ZBED1O96006 694 aa13.55□□□□□ -0.24
VRK3-203ENST00000424804 IGLV3-19P01714 112 aa13.55□□□□□ -0.24
VRK3-203ENST00000424804 CFIP05156 583 aa13.55□□□□□ -0.24
VRK3-203ENST00000424804 PRKCSHP14314 528 aaPredicted RBP13.55□□□□□ -0.24
VRK3-203ENST00000424804 PRKCHP24723 683 aa13.55□□□□□ -0.24
VRK3-203ENST00000424804 HOXD9P28356 352 aaPredicted RBP13.55□□□□□ -0.24
VRK3-203ENST00000424804 CHKAP35790 457 aa13.55□□□□□ -0.24
VRK3-203ENST00000424804 MARSP56192 900 aaKnown RBP13.55□□□□□ -0.24
VRK3-203ENST00000424804 ZNF234Q14588 700 aa13.55□□□□□ -0.24
VRK3-203ENST00000424804 GOLGA7BQ2TAP0 167 aa13.55□□□□□ -0.24
VRK3-203ENST00000424804 TMEM270Q6UE05 265 aa13.55□□□□□ -0.24
VRK3-203ENST00000424804 TADA2BQ86TJ2 420 aa13.55□□□□□ -0.24
VRK3-203ENST00000424804 ARHGEF19Q8IW93 802 aa13.55□□□□□ -0.24
VRK3-203ENST00000424804 FAM114A1Q8IWE2 563 aa13.55□□□□□ -0.24
VRK3-203ENST00000424804 MINDY1Q8N5J2 469 aa13.55□□□□□ -0.24
VRK3-203ENST00000424804 TFAP2BQ92481 460 aa13.55□□□□□ -0.24
VRK3-203ENST00000424804 CDK5RAP1Q96SZ6 601 aaKnown RBP13.55□□□□□ -0.24
VRK3-203ENST00000424804 INTS2Q9H0H0 1204 aaKnown RBP13.55□□□□□ -0.24
VRK3-203ENST00000424804 TSPAN16Q9UKR8 245 aa13.55□□□□□ -0.24
VRK3-203ENST00000424804 ZMIZ1Q9ULJ6 1067 aa13.55□□□□□ -0.24
VRK3-203ENST00000424804 O00370 1275 aa13.54□□□□□ -0.24
VRK3-203ENST00000424804 P4HA2O15460 535 aa13.54□□□□□ -0.24
VRK3-203ENST00000424804 HYAL3O43820 417 aaPredicted RBP13.54□□□□□ -0.24
VRK3-203ENST00000424804 NCAM1P13591 858 aa13.54□□□□□ -0.24
VRK3-203ENST00000424804 CD6P30203 668 aa13.54□□□□□ -0.24
VRK3-203ENST00000424804 ZNF132P52740 706 aa13.54□□□□□ -0.24
VRK3-203ENST00000424804 GFPT1Q06210 699 aaPredicted RBP13.54□□□□□ -0.24
VRK3-203ENST00000424804 SGO2Q562F6 1265 aa13.54□□□□□ -0.24
VRK3-203ENST00000424804 CCDC183Q5T5S1 534 aa13.54□□□□□ -0.24
VRK3-203ENST00000424804 KIAA1324Q6UXG2 1013 aaKnown RBP13.54□□□□□ -0.24
VRK3-203ENST00000424804 SCML4Q8N228 414 aa13.54□□□□□ -0.24
VRK3-203ENST00000424804 ARHGAP18Q8N392 663 aa13.54□□□□□ -0.24
VRK3-203ENST00000424804 LMO3Q8TAP4 145 aa13.54□□□□□ -0.24
VRK3-203ENST00000424804 UBA3Q8TBC4 463 aa13.54□□□□□ -0.24
VRK3-203ENST00000424804 KCTD13Q8WZ19 329 aa13.54□□□□□ -0.24
VRK3-203ENST00000424804 TOE1Q96GM8 510 aaKnown RBP13.54□□□□□ -0.24
VRK3-203ENST00000424804 LMLNQ96KR4 655 aa13.54□□□□□ -0.24
VRK3-203ENST00000424804 CAMK1GQ96NX5 476 aa13.54□□□□□ -0.24
VRK3-203ENST00000424804 GTPBP2Q9BX10 602 aaKnown RBP13.54□□□□□ -0.24
VRK3-203ENST00000424804 SLC2A11Q9BYW1 496 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms