RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 MGAT5Q09328 741 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 E2F5Q15329 346 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 ANKRD20A2Q5SQ80 823 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 ANKRD20A1Q5TYW2 823 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 ANKRD20A3Q5VUR7 823 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 CYB5D1Q6P9G0 228 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 C17orf99Q6UX52 265 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 ZNF513Q8N8E2 541 aaPredicted RBP11.31□□□□□ -0.6
DDX56-203ENST00000421223 DENND1AQ8TEH3 1009 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 PGBD4Q96DM1 585 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 HNRNPABQ99729 332 aaKnown RBP11.31□□□□□ -0.6
DDX56-203ENST00000421223 TMEM30AQ9NV96 361 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 GEMIN8Q9NWZ8 242 aaKnown RBP11.31□□□□□ -0.6
DDX56-203ENST00000421223 UBP1Q9NZI7 540 aa11.31□□□□□ -0.6
DDX56-203ENST00000421223 BCLAF3A2AJT9 711 aaKnown RBP11.3□□□□□ -0.6
DDX56-203ENST00000421223 CFAP69A5D8W1 941 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 UNCXA6NJT0 531 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 RNF103O00237 685 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 COPEO14579 308 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 TYROBPO43914 113 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 ELNP15502 786 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 SETDB1Q15047 1291 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 RGMBQ6NW40 437 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 TAF2Q6P1X5 1199 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 UNC5AQ6ZN44 842 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 RNF217Q8TC41 542 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 MTG1Q9BT17 334 aaPredicted RBP11.3□□□□□ -0.6
DDX56-203ENST00000421223 MECRQ9BV79 373 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 PCMTD2Q9NV79 361 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 KLHL8Q9P2G9 620 aaPredicted RBP11.3□□□□□ -0.6
DDX56-203ENST00000421223 TRPV2Q9Y5S1 764 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 C2orf71A6NGG8 1288 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 KITP10721 976 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 BGNP21810 368 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 PSMB4P28070 264 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 NOS2P35228 1153 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 GTF2A1P52655 376 aaPredicted RBP11.3□□□□□ -0.6
DDX56-203ENST00000421223 TIGD5Q53EQ6 642 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 RWDD4Q6NW29 188 aaKnown RBP11.3□□□□□ -0.6
DDX56-203ENST00000421223 OTOAQ7RTW8 1153 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 HACE1Q8IYU2 909 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 GSTCDQ8NEC7 633 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 USP33Q8TEY7 942 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 PTPRN2Q92932 1015 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 P2RY11Q96G91 374 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 CELF6Q96J87 481 aaKnown RBP11.3□□□□□ -0.6
DDX56-203ENST00000421223 PPP1R10Q96QC0 940 aaKnown RBP11.3□□□□□ -0.6
DDX56-203ENST00000421223 SMOQ99835 787 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 SMYD2Q9NRG4 433 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 FZD10Q9ULW2 581 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 PADI3Q9ULW8 664 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 H3BRJ5 948 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 PRPF4O43172 522 aaKnown RBP eCLIP11.3□□□□□ -0.6
DDX56-203ENST00000421223 MYCP01106 439 aaPredicted RBP11.3□□□□□ -0.6
DDX56-203ENST00000421223 AMHP03971 560 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 ZFXP17010 805 aaPredicted RBP11.3□□□□□ -0.6
DDX56-203ENST00000421223 MGAT1P26572 445 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 TARSP26639 723 aaKnown RBP11.3□□□□□ -0.6
DDX56-203ENST00000421223 PDK4Q16654 411 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 AGMOQ6ZNB7 445 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 FAM35AQ86V20 835 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 TOP6BLQ8N6T0 577 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 ARMC2Q8NEN0 867 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 SLC44A1Q8WWI5 657 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 TRIB2Q92519 343 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 TMEM237Q96Q45 408 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 POPDC2Q9HBU9 364 aa11.3□□□□□ -0.6
DDX56-203ENST00000421223 KRT37O76014 449 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 STK10O94804 968 aaKnown RBP11.29□□□□□ -0.6
DDX56-203ENST00000421223 ASGR1P07306 291 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 CSH1P0DML2 217 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 CSH2P0DML3 217 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 WARSP23381 471 aaKnown RBP11.29□□□□□ -0.6
DDX56-203ENST00000421223 ABCG1P45844 678 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 TPI1P60174 286 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 ZBTB16Q05516 673 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 CACNB2Q08289 660 aaPredicted RBP11.29□□□□□ -0.6
DDX56-203ENST00000421223 CDHR3Q6ZTQ4 885 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 SLC26A11Q86WA9 606 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 DNAAF3Q8N9W5 541 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 USP6NLQ92738 828 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 LRRC37BQ96QE4 947 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 TMEM209Q96SK2 561 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 ADAM2Q99965 735 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 MYLK2Q9H1R3 596 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 MANSC1Q9H8J5 431 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 ANLNQ9NQW6 1124 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 MARCOQ9UEW3 520 aaPredicted RBP11.29□□□□□ -0.6
DDX56-203ENST00000421223 HTTP42858 3142 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 DUSP11O75319 330 aaKnown RBP11.29□□□□□ -0.6
DDX56-203ENST00000421223 ZWINTO95229 277 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 ERCC2P18074 760 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 ALDH3A1P30838 453 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 GMPRP36959 345 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 PCBP1Q15365 356 aaKnown RBP eCLIP11.29□□□□□ -0.6
DDX56-203ENST00000421223 FYB2Q5VWT5 728 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 MFSD14CQ5VZR4 134 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 STRADAQ7RTN6 431 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 KDELC2Q7Z4H8 507 aa11.29□□□□□ -0.6
DDX56-203ENST00000421223 SAPCD2Q86UD0 394 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms