RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	DDX50	Q9BQ39	737 aa	Known RBP	13.67	□□□□□ -0.22
SF1-206	ENST00000413725	FAM83C	Q9BQN1	747 aa		13.67	□□□□□ -0.22
SF1-206	ENST00000413725	WDCP	Q9H6R7	721 aa		13.67	□□□□□ -0.22
SF1-206	ENST00000413725	CD320	Q9NPF0	282 aa		13.67	□□□□□ -0.22
SF1-206	ENST00000413725	SLC2A4RG	Q9NR83	387 aa		13.67	□□□□□ -0.22
SF1-206	ENST00000413725	PIGV	Q9NUD9	493 aa		13.67	□□□□□ -0.22
SF1-206	ENST00000413725	BDP1	A6H8Y1	2624 aa		13.67	□□□□□ -0.22
SF1-206	ENST00000413725	COL4A3	Q01955	1670 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725	NUP205	Q92621	2012 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725		A0A0C4DFX4	3053 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725	MYO1F	O00160	1098 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725	NARS	O43776	548 aa	Known RBP	13.66	□□□□□ -0.22
SF1-206	ENST00000413725	GREM1	O60565	184 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725	ABCB7	O75027	752 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725	ENDOD1	O94919	500 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725	KLKB1	P03952	638 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725	CHKA	P35790	457 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725	CCZ1B	P86790	482 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725	CCZ1	P86791	482 aa	Predicted RBP	13.66	□□□□□ -0.22
SF1-206	ENST00000413725	OGDH	Q02218	1023 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725	NR1H3	Q13133	447 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725	PIGH	Q14442	188 aa	Predicted RBP	13.66	□□□□□ -0.22
SF1-206	ENST00000413725	ACAP1	Q15027	740 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725	EML3	Q32P44	896 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725	ARL13B	Q3SXY8	428 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725	ADGRF1	Q5T601	910 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725	BNIPL	Q7Z465	357 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725	SLC35G2	Q8TBE7	412 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725	CENPI	Q92674	756 aa	Predicted RBP	13.66	□□□□□ -0.22
SF1-206	ENST00000413725	ASIC4	Q96FT7	647 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725	ADAM33	Q9BZ11	813 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725	EBF3	Q9H4W6	596 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725	TRPV5	Q9NQA5	729 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725	CALCOCO1	Q9P1Z2	691 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725	MUTYH	Q9UIF7	546 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725	AGO1	Q9UL18	857 aa	Known RBP	13.66	□□□□□ -0.22
SF1-206	ENST00000413725	VCAN	P13611	3396 aa		13.66	□□□□□ -0.22
SF1-206	ENST00000413725		A0A0A6YYK5	440 aa	Predicted RBP	13.65	□□□□□ -0.22
SF1-206	ENST00000413725	KCNU1	A8MYU2	1149 aa		13.65	□□□□□ -0.22
SF1-206	ENST00000413725	ARNTL	O00327	626 aa		13.65	□□□□□ -0.22
SF1-206	ENST00000413725	ACSL4	O60488	711 aa		13.65	□□□□□ -0.22
SF1-206	ENST00000413725	MTA2	O94776	668 aa		13.65	□□□□□ -0.22
SF1-206	ENST00000413725	ADH1C	P00326	375 aa		13.65	□□□□□ -0.22
SF1-206	ENST00000413725	ARSA	P15289	507 aa		13.65	□□□□□ -0.22
SF1-206	ENST00000413725	NOP2	P46087	812 aa	Known RBP	13.65	□□□□□ -0.22
SF1-206	ENST00000413725	VAV2	P52735	878 aa		13.65	□□□□□ -0.22
SF1-206	ENST00000413725	HDAC4	P56524	1084 aa		13.65	□□□□□ -0.22
SF1-206	ENST00000413725	ZNF252P-AS1	Q0IIN9	211 aa		13.65	□□□□□ -0.22
SF1-206	ENST00000413725	RUNX3	Q13761	415 aa		13.65	□□□□□ -0.22
SF1-206	ENST00000413725	ITPRIPL2	Q3MIP1	535 aa		13.65	□□□□□ -0.22
SF1-206	ENST00000413725	SH3PXD2A	Q5TCZ1	1133 aa		13.65	□□□□□ -0.22
SF1-206	ENST00000413725	TRIM68	Q6AZZ1	485 aa		13.65	□□□□□ -0.22
SF1-206	ENST00000413725	FAM131B	Q86XD5	332 aa		13.65	□□□□□ -0.22
SF1-206	ENST00000413725	CPXM2	Q8N436	756 aa		13.65	□□□□□ -0.22
SF1-206	ENST00000413725	DESI2	Q9BSY9	194 aa		13.65	□□□□□ -0.22
SF1-206	ENST00000413725	TRIM7	Q9C029	511 aa		13.65	□□□□□ -0.22
SF1-206	ENST00000413725	TKTL2	Q9H0I9	626 aa		13.65	□□□□□ -0.22
SF1-206	ENST00000413725	LINC00597	Q9H2U6	94 aa		13.65	□□□□□ -0.22
SF1-206	ENST00000413725	ARHGEF38	Q9NXL2	777 aa		13.65	□□□□□ -0.22
SF1-206	ENST00000413725	REXO2	Q9Y3B8	237 aa	Known RBP	13.65	□□□□□ -0.22
SF1-206	ENST00000413725	TRIO	O75962	3097 aa		13.65	□□□□□ -0.22
SF1-206	ENST00000413725	TECTA	O75443	2155 aa		13.65	□□□□□ -0.22
SF1-206	ENST00000413725	TYW5	A2RUC4	315 aa	Known RBP	13.64	□□□□□ -0.23
SF1-206	ENST00000413725	CYBB	P04839	570 aa		13.64	□□□□□ -0.23
SF1-206	ENST00000413725	ATXN1	P54253	815 aa	Known RBP	13.64	□□□□□ -0.23
SF1-206	ENST00000413725	AIF1	P55008	147 aa		13.64	□□□□□ -0.23
SF1-206	ENST00000413725	AMPD2	Q01433	879 aa		13.64	□□□□□ -0.23
SF1-206	ENST00000413725	TNK2	Q07912	1038 aa		13.64	□□□□□ -0.23
SF1-206	ENST00000413725	KIF5A	Q12840	1032 aa		13.64	□□□□□ -0.23
SF1-206	ENST00000413725	TCEAL1	Q15170	157 aa		13.64	□□□□□ -0.23
SF1-206	ENST00000413725	DHCR24	Q15392	516 aa		13.64	□□□□□ -0.23
SF1-206	ENST00000413725	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.64	□□□□□ -0.23
SF1-206	ENST00000413725	SCYL2	Q6P3W7	929 aa		13.64	□□□□□ -0.23
SF1-206	ENST00000413725	FAM217A	Q8IXS0	508 aa		13.64	□□□□□ -0.23
SF1-206	ENST00000413725	ADGRG2	Q8IZP9	1017 aa		13.64	□□□□□ -0.23
SF1-206	ENST00000413725	NIPA2	Q8N8Q9	360 aa		13.64	□□□□□ -0.23
SF1-206	ENST00000413725	BTBD6	Q96KE9	485 aa		13.64	□□□□□ -0.23
SF1-206	ENST00000413725	CALR3	Q96L12	384 aa	Known RBP	13.64	□□□□□ -0.23
SF1-206	ENST00000413725	PPP1R9B	Q96SB3	815 aa		13.64	□□□□□ -0.23
SF1-206	ENST00000413725	IRX2	Q9BZI1	471 aa	Predicted RBP	13.64	□□□□□ -0.23
SF1-206	ENST00000413725	ECT2	Q9H8V3	914 aa		13.64	□□□□□ -0.23
SF1-206	ENST00000413725	OSGEP	Q9NPF4	335 aa		13.64	□□□□□ -0.23
SF1-206	ENST00000413725	HPS4	Q9NQG7	708 aa		13.64	□□□□□ -0.23
SF1-206	ENST00000413725	SPHK2	Q9NRA0	654 aa		13.64	□□□□□ -0.23
SF1-206	ENST00000413725	GTSE1	Q9NYZ3	720 aa		13.64	□□□□□ -0.23
SF1-206	ENST00000413725	STOML2	Q9UJZ1	356 aa		13.64	□□□□□ -0.23
SF1-206	ENST00000413725	FBXL21	Q9UKT6	434 aa		13.64	□□□□□ -0.23
SF1-206	ENST00000413725	CHD5	Q8TDI0	1954 aa		13.63	□□□□□ -0.23
SF1-206	ENST00000413725	BTNL10	A8MVZ5	291 aa		13.63	□□□□□ -0.23
SF1-206	ENST00000413725		F5H5T6	163 aa		13.63	□□□□□ -0.23
SF1-206	ENST00000413725	PJA2	O43164	708 aa		13.63	□□□□□ -0.23
SF1-206	ENST00000413725	DCX	O43602	365 aa		13.63	□□□□□ -0.23
SF1-206	ENST00000413725	PRPSAP2	O60256	369 aa		13.63	□□□□□ -0.23
SF1-206	ENST00000413725	PAGE1	O75459	146 aa		13.63	□□□□□ -0.23
SF1-206	ENST00000413725	PROSC	O94903	275 aa		13.63	□□□□□ -0.23
SF1-206	ENST00000413725	CYP17A1	P05093	508 aa		13.63	□□□□□ -0.23
SF1-206	ENST00000413725	CCDC175	P0C221	793 aa		13.63	□□□□□ -0.23
SF1-206	ENST00000413725	ADH5	P11766	374 aa		13.63	□□□□□ -0.23
SF1-206	ENST00000413725	PCK1	P35558	622 aa		13.63	□□□□□ -0.23
SF1-206	ENST00000413725	ARHGAP25	P42331	645 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms