RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 DRICH1Q6PGQ1 229 aaPredicted RBP6.89□□□□□ -1.31
VPS41-204ENST00000413141 KLHDC10Q6PID8 442 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 SPATA31D4Q6ZUB0 917 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 RFX8Q6ZV50 586 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 DNAJB7Q7Z6W7 309 aaPredicted RBP6.89□□□□□ -1.31
VPS41-204ENST00000413141 TMEM150AQ86TG1 271 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 TADA2BQ86TJ2 420 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 MIB1Q86YT6 1006 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 JAMLQ86YT9 394 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 TMC8Q8IU68 726 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 CCDC105Q8IYK2 499 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 ZNF276Q8N554 614 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 PLD5Q8N7P1 536 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 TTC13Q8NBP0 860 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 KREMEN2Q8NCW0 462 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 CCDC26Q8TAB7 109 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 SLC35B2Q8TB61 432 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 ACTL9Q8TC94 416 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.89□□□□□ -1.31
VPS41-204ENST00000413141 ANKRD7Q92527 254 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 SLCO2A1Q92959 643 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 NKD2Q969F2 451 aaPredicted RBP6.89□□□□□ -1.31
VPS41-204ENST00000413141 RNF34Q969K3 372 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 SLC39A13Q96H72 371 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 FCRL2Q96LA5 508 aaPredicted RBP6.89□□□□□ -1.31
VPS41-204ENST00000413141 FAM118BQ9BPY3 351 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 TRIM51Q9BSJ1 452 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 MAK16Q9BXY0 300 aaKnown RBP6.89□□□□□ -1.31
VPS41-204ENST00000413141 PARD6BQ9BYG5 372 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 FRMD8P1Q9BZ68 369 aaPredicted RBP6.89□□□□□ -1.31
VPS41-204ENST00000413141 MAGEB5Q9BZ81 275 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 NKX2-4Q9H2Z4 354 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 PLEKHA4Q9H4M7 779 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 WDCPQ9H6R7 721 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 ZNF334Q9HCZ1 680 aaPredicted RBP6.89□□□□□ -1.31
VPS41-204ENST00000413141 ARHGEF4Q9NR80 690 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 TRPM5Q9NZQ8 1165 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 CWC15Q9P013 229 aaKnown RBP6.89□□□□□ -1.31
VPS41-204ENST00000413141 MARCH2Q9P0N8 246 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 DMGDHQ9UI17 866 aaKnown RBP6.89□□□□□ -1.31
VPS41-204ENST00000413141 RASAL2Q9UJF2 1139 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 RAB21Q9UL25 225 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 ASB3Q9Y575 518 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 CHD9Q3L8U1 2897 aa6.89□□□□□ -1.31
VPS41-204ENST00000413141 SLC12A8A0AV02 714 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 ESYT3A0FGR9 886 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 KCNU1A8MYU2 1149 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 FAM72CH0Y354 149 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 DCLK1O15075 740 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 COCHO43405 550 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 CREB3O43889 395 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 MFSD11O43934 449 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 CLASP2O75122 1294 aaKnown RBP6.88□□□□□ -1.31
VPS41-204ENST00000413141 PAGE1O75459 146 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 ZMYND10O75800 440 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 ECEL1O95672 775 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 TBX18O95935 607 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 MOCS2O96007 188 aaPredicted RBP6.88□□□□□ -1.31
VPS41-204ENST00000413141 APOEP02649 317 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 F11P03951 625 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 TUBBP07437 444 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 SLC2A3P11169 496 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 H2AFXP16104 143 aaPredicted RBP6.88□□□□□ -1.31
VPS41-204ENST00000413141 ZFXP17010 805 aaPredicted RBP6.88□□□□□ -1.31
VPS41-204ENST00000413141 MCM3P25205 808 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 TNFRSF8P28908 595 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 HOXA9P31269 272 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 HOXC13P31276 330 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 ATP5C1P36542 298 aaKnown RBP6.88□□□□□ -1.31
VPS41-204ENST00000413141 GGCXP38435 758 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 KCNJ1P48048 391 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 ZNF135P52742 658 aaPredicted RBP6.88□□□□□ -1.31
VPS41-204ENST00000413141 VCPP55072 806 aaKnown RBP6.88□□□□□ -1.31
VPS41-204ENST00000413141 TPI1P60174 286 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 NRG1Q02297 640 aaPredicted RBP6.88□□□□□ -1.31
VPS41-204ENST00000413141 GUCY2DQ02846 1103 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 RING1Q06587 406 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 BYSLQ13895 437 aaKnown RBP6.88□□□□□ -1.31
VPS41-204ENST00000413141 NOMO1Q15155 1222 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 OASLQ15646 514 aaKnown RBP6.88□□□□□ -1.31
VPS41-204ENST00000413141 KCTD19Q17RG1 926 aaPredicted RBP6.88□□□□□ -1.31
VPS41-204ENST00000413141 PPM1LQ5SGD2 360 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 HECTD3Q5T447 861 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 FAM72AQ5TYM5 149 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 MANEALQ5VSG8 457 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 PDE12Q6L8Q7 609 aaKnown RBP6.88□□□□□ -1.31
VPS41-204ENST00000413141 FAM72DQ6L9T8 149 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 FBXO38Q6PIJ6 1188 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 NPNTQ6UXI9 565 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 MAATS1Q7Z4T9 603 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 FAM72BQ86X60 149 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 MICAL1Q8TDZ2 1067 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 GRK7Q8WTQ7 553 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 GDPD5Q8WTR4 605 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 SEC14L1Q92503 715 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 CCDC114Q96M63 670 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 HAPLN3Q96S86 360 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 EPAS1Q99814 870 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 LRRC3Q9BY71 257 aa6.88□□□□□ -1.31
VPS41-204ENST00000413141 RAB17Q9H0T7 212 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms