RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 CNKSR2Q8WXI2 1034 aa14.27□□□□□ -0.13
CLTCL1-201ENST00000412649 HMG20AQ9NP66 347 aa14.27□□□□□ -0.13
CLTCL1-201ENST00000412649 BAZ2AQ9UIF9 1905 aaKnown RBP14.27□□□□□ -0.13
CLTCL1-201ENST00000412649 RGPD2P0DJD1 1756 aa14.27□□□□□ -0.13
CLTCL1-201ENST00000412649 GOLGA8TH3BQL2 631 aa14.27□□□□□ -0.13
CLTCL1-201ENST00000412649 SNHG28P0DPA3 235 aa14.27□□□□□ -0.13
CLTCL1-201ENST00000412649 FASP25445 335 aa14.27□□□□□ -0.13
CLTCL1-201ENST00000412649 PIK3R1P27986 724 aa14.27□□□□□ -0.13
CLTCL1-201ENST00000412649 DPYSQ14117 519 aa14.27□□□□□ -0.13
CLTCL1-201ENST00000412649 DGKDQ16760 1214 aa14.27□□□□□ -0.13
CLTCL1-201ENST00000412649 FAM160B1Q5W0V3 765 aa14.27□□□□□ -0.13
CLTCL1-201ENST00000412649 EGFLAMQ63HQ2 1017 aa14.27□□□□□ -0.13
CLTCL1-201ENST00000412649 TARS2Q9BW92 718 aaKnown RBP14.27□□□□□ -0.13
CLTCL1-201ENST00000412649 AFG3L2Q9Y4W6 797 aa14.27□□□□□ -0.13
CLTCL1-201ENST00000412649 TBC1D4O60343 1298 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 OATP04181 439 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 GP5P40197 560 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 PDK2Q15119 407 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 AGKQ53H12 422 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 CAMK1DQ8IU85 385 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 MYO1HQ8N1T3 1032 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 TMEM143Q96AN5 459 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 CEP19Q96LK0 163 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 CISHQ9NSE2 258 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 VTI1BQ9UEU0 232 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 TMEM191CA6NGB0 347 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 TRIM38O00635 465 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 AOC1P19801 751 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 ALDH1B1P30837 517 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 PLEKHG4Q58EX7 1191 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 STRA8Q7Z7C7 330 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 PLD3Q8IV08 490 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 C10orf107Q8IVU9 208 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 ZCCHC7Q8N3Z6 543 aaKnown RBP14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 RYBPQ8N488 228 aaPredicted RBP14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 PCDH20Q8N6Y1 951 aaKnown RBP14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 GMCL1Q96IK5 515 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 MRPL4Q9BYD3 311 aaKnown RBP14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 GPR88Q9GZN0 384 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 BRD8Q9H0E9 1235 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 XPNPEP3Q9NQH7 507 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 WDR27A2RRH5 827 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 BHMG1C9JSJ3 638 aaPredicted RBP14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 PHGDHO43175 533 aaKnown RBP14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 ZBTB11O95625 1053 aaPredicted RBP14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 ZNF23P17027 643 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 PICK1Q9NRD5 415 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 ZNF277Q9NRM2 450 aaPredicted RBP14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 DNAJC28Q9NX36 388 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 IPO11Q9UI26 975 aaKnown RBP14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 TIAM2Q8IVF5 1701 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 CLRN2A0PK11 232 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 CGRRF1Q99675 332 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 WDR18Q9BV38 432 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 GPATCH2LQ9NWQ4 482 aa14.26□□□□□ -0.13
CLTCL1-201ENST00000412649 TIMM44O43615 452 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 RBL1P28749 1068 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 MIPP30301 263 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 SOX11P35716 441 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 CDKN2BP42772 138 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 BFSP2Q13515 415 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 ZNF568Q3ZCX4 644 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 PTAR1Q7Z6K3 402 aaPredicted RBP14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 DHRSXQ8N5I4 330 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 FNDC8Q8TC99 324 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 RSPH1Q8WYR4 309 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 HAPLN3Q96S86 360 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 GPATCH1Q9BRR8 931 aaKnown RBP14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 RAVER2Q9HCJ3 691 aaKnown RBP14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 BARX2Q9UMQ3 279 aaPredicted RBP14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 NENFQ9UMX5 172 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 CLEC11AQ9Y240 323 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 H6PDO95479 791 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 DLGAP3O95886 979 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 GLRBP48167 497 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 RGS7P49802 495 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 UGP2Q16851 508 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 FAM98CQ17RN3 349 aaKnown RBP14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 DSELQ8IZU8 1212 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 FNIP1Q8TF40 1166 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 CNPY3Q9BT09 278 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 C10orf71Q711Q0 1435 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 TMEM150BA6NC51 233 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 CCNT2O60583 730 aaKnown RBP14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 PAMP19021 973 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 CCNA2P20248 432 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 SLC12A1Q13621 1099 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 VWA5B1Q5TIE3 1220 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 NPNTQ6UXI9 565 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 BORCS6Q96GS4 357 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 C9orf16Q9BUW7 83 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 COG4Q9H9E3 785 aa14.25□□□□□ -0.13
CLTCL1-201ENST00000412649 BOLA2-SMG1P6H3BVE0 249 aa14.24□□□□□ -0.13
CLTCL1-201ENST00000412649 RPL14P50914 215 aaKnown RBP14.24□□□□□ -0.13
CLTCL1-201ENST00000412649 HSPA2P54652 639 aa14.24□□□□□ -0.13
CLTCL1-201ENST00000412649 RHBDL3P58872 404 aa14.24□□□□□ -0.13
CLTCL1-201ENST00000412649 AASDHQ4L235 1098 aaPredicted RBP14.24□□□□□ -0.13
CLTCL1-201ENST00000412649 SAMD4BQ5PRF9 694 aaKnown RBP14.24□□□□□ -0.13
CLTCL1-201ENST00000412649 PERM1Q5SV97 790 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms