RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 EPHA5P54756 1037 aa13.06□□□□□ -0.32
PMS1-204ENST00000409823 ADCY2Q08462 1091 aa13.06□□□□□ -0.32
PMS1-204ENST00000409823 KRT81Q14533 505 aa13.06□□□□□ -0.32
PMS1-204ENST00000409823 PRSS36Q5K4E3 855 aa13.06□□□□□ -0.32
PMS1-204ENST00000409823 FCRL2Q96LA5 508 aaPredicted RBP13.06□□□□□ -0.32
PMS1-204ENST00000409823 LMCD1Q9NZU5 365 aa13.06□□□□□ -0.32
PMS1-204ENST00000409823 FZD10Q9ULW2 581 aa13.06□□□□□ -0.32
PMS1-204ENST00000409823 TCRBV7S2A1N4TA0A589 114 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 PAGE1O75459 146 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 AVPR1AP37288 418 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 DYNLT1P63172 113 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 BOLA3Q53S33 107 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 TMEM184AQ6ZMB5 413 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 TADA2BQ86TJ2 420 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 DENND1CQ8IV53 801 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 ZFRQ96KR1 1074 aaKnown RBP13.05□□□□□ -0.32
PMS1-204ENST00000409823 DZANK1Q9NVP4 752 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 NOTCH4Q99466 2003 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 GOLGA6L7A0A1B0GV03 622 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 TRDMT1O14717 391 aaKnown RBP13.05□□□□□ -0.32
PMS1-204ENST00000409823 FGGP02679 453 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 KLKB1P03952 638 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 TUBP50607 506 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 TRIP4Q15650 581 aaPredicted RBP13.05□□□□□ -0.32
PMS1-204ENST00000409823 EFHC2Q5JST6 749 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 LRRC38Q5VT99 294 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 POLNQ7Z5Q5 900 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 GPR149Q86SP6 731 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 KATNAL2Q8IYT4 538 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 NETO2Q8NC67 525 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 SLC39A13Q96H72 371 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 KCTD15Q96SI1 283 aaPredicted RBP13.05□□□□□ -0.32
PMS1-204ENST00000409823 CDK5RAP1Q96SZ6 601 aaKnown RBP13.05□□□□□ -0.32
PMS1-204ENST00000409823 FAM118BQ9BPY3 351 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 ADAM7Q9H2U9 754 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 MTMR10Q9NXD2 777 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 OR12D3Q9UGF7 316 aa13.05□□□□□ -0.32
PMS1-204ENST00000409823 TRAV19A0A0A6YYK7 116 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 PDE2AO00408 941 aaPredicted RBP13.04□□□□□ -0.32
PMS1-204ENST00000409823 PRAMEF12O95522 483 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 TUBB4AP04350 444 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 GOT1P17174 413 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 KDELR1P24390 212 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 L1CAMP32004 1257 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 NUMBP49757 651 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 CTC1Q2NKJ3 1217 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 ARL13BQ3SXY8 428 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 HABP4Q5JVS0 413 aaKnown RBP13.04□□□□□ -0.32
PMS1-204ENST00000409823 CREG2Q8IUH2 290 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 CMTM8Q8IZV2 173 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.04□□□□□ -0.32
PMS1-204ENST00000409823 SAE1Q9UBE0 346 aaPredicted RBP13.04□□□□□ -0.32
PMS1-204ENST00000409823 ANAPC1Q9H1A4 1944 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 C3orf70A6NLC5 250 aaPredicted RBP13.04□□□□□ -0.32
PMS1-204ENST00000409823 KCNU1A8MYU2 1149 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 STC2O76061 302 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 MAP3K6O95382 1288 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 APOEP02649 317 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 TCP1P17987 556 aaKnown RBP13.04□□□□□ -0.32
PMS1-204ENST00000409823 CORO1AP31146 461 aaKnown RBP13.04□□□□□ -0.32
PMS1-204ENST00000409823 DPYSL3Q14195 570 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 KLHDC10Q6PID8 442 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 CCDC33Q8N5R6 958 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 CMASQ8NFW8 434 aaPredicted RBP13.04□□□□□ -0.32
PMS1-204ENST00000409823 RIN3Q8TB24 985 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 BHMTQ93088 406 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 HAUS1Q96CS2 278 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 GUCD1Q96NT3 240 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 KLF16Q9BXK1 252 aaPredicted RBP13.04□□□□□ -0.32
PMS1-204ENST00000409823 AP1M1Q9BXS5 423 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 CARD9Q9H257 536 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 PCDH18Q9HCL0 1135 aa13.04□□□□□ -0.32
PMS1-204ENST00000409823 FSHRP23945 695 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 IL4RP24394 825 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 HARS2P49590 506 aaKnown RBP13.03□□□□□ -0.32
PMS1-204ENST00000409823 COG7P83436 770 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 ARHGAP15Q53QZ3 475 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 PIK3R6Q5UE93 754 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 RAP1GAP2Q684P5 730 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 CES5AQ6NT32 575 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 RFWD3Q6PCD5 774 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 EXD1Q8NHP7 514 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 ADAMTS19Q8TE59 1207 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 FGF13Q92913 245 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 ARHGEF38Q9NXL2 777 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 CWC15Q9P013 229 aaKnown RBP13.03□□□□□ -0.32
PMS1-204ENST00000409823 CFAP97Q9P2B7 532 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 VANGL2Q9ULK5 521 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 NR2E1Q9Y466 385 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 HS3ST4Q9Y661 456 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 C2orf16Q68DN1 1984 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 OLFM2O95897 454 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 KCNA5P22460 613 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 CDKN2BP42772 138 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 VCPP55072 806 aaKnown RBP13.03□□□□□ -0.32
PMS1-204ENST00000409823 PPP2R5DQ14738 602 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 FAM182AQ5T1J6 154 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 SEL1L2Q5TEA6 688 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 CCDC181Q5TID7 509 aa13.03□□□□□ -0.32
PMS1-204ENST00000409823 RWDD4Q6NW29 188 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms