RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 MMRN2Q9H8L6 949 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 TMEM8AQ9HCN3 771 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 PLK2Q9NYY3 685 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 CLIC5Q9NZA1 410 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 CYP8B1Q9UNU6 501 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 MAPK8IP1Q9UQF2 711 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 SLC27A6Q9Y2P4 619 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 RAD54BQ9Y620 910 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 TMEM131Q92545 1883 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 FAM237AA0A1B0GTK4 181 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 A0A1W2PQD8 194 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 ARHGAP33O14559 1287 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 OPHN1O60890 802 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 NDUFS2O75306 463 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 PENKP01210 267 aaPredicted RBP9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 SYPP08247 313 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 GTF2H1P32780 548 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 CHKAP35790 457 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 NDUFA8P51970 172 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 DPYDQ12882 1025 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 ZNF394Q53GI3 561 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 SYCP2LQ5T4T6 812 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 FYB2Q5VWT5 728 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 KRT39Q6A163 491 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 METTL3Q86U44 580 aaKnown RBP9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 RGL4Q8IZJ4 473 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 GUF1Q8N442 669 aaKnown RBP9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 TTC39CQ8N584 583 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 MINDY1Q8N5J2 469 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 P2RY11Q96G91 374 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 FAXDC2Q96IV6 333 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 SPATA32Q96LK8 384 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 HSPA12BQ96MM6 686 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 DCLK3Q9C098 648 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 SLC6A17Q9H1V8 727 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 FAM124BQ9H5Z6 455 aaPredicted RBP9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 RASAL2Q9UJF2 1139 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 STON1Q9Y6Q2 735 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 TP53BP1Q12888 1972 aaPredicted RBP9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 MGAQ8IWI9 3026 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 PTPN13Q12923 2485 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 MYLKQ15746 1914 aa9.62□□□□□ -0.87
NIF3L1-203ENST00000409129 COL6A6A6NMZ7 2263 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 NPC1O15118 1278 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 HMBSP08397 361 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 CD59P13987 128 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 CORO1AP31146 461 aaKnown RBP9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 RDXP35241 583 aaKnown RBP9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 ZNF132P52740 706 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 MFAP3P55082 362 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 KRT85P78386 507 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 EFEMP1Q12805 493 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 STARD3Q14849 445 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 FUT11Q495W5 492 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 WDR45BQ5MNZ6 344 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 KIAA1324Q6UXG2 1013 aaKnown RBP9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 CCNI2Q6ZMN8 369 aaPredicted RBP9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 KRBA2Q6ZNG9 492 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 ARHGAP18Q8N392 663 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 SLC4A11Q8NBS3 891 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 SEMA4DQ92854 862 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 FOXJ1Q92949 421 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 TMEM176AQ96HP8 235 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 PIWIL1Q96J94 861 aaKnown RBP9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 PRDM16Q9HAZ2 1276 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 CD93Q9NPY3 652 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 ITM2CQ9NQX7 267 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 CISHQ9NSE2 258 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 DNAAF2Q9NVR5 837 aaKnown RBP9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 RAB20Q9NX57 234 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 WSB2Q9NYS7 404 aaPredicted RBP9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 THAP10Q9P2Z0 257 aaPredicted RBP9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 SUSD2Q9UGT4 822 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 AGO1Q9UL18 857 aaKnown RBP9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 MYH10P35580 1976 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 SPTA1P02549 2419 aa9.61□□□□□ -0.87
NIF3L1-203ENST00000409129 PIEZO2Q9H5I5 2752 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 SLC12A8A0AV02 714 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 H0Y626 953 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 STX10O60499 249 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 TRIM16O95361 564 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 CYBBP04839 570 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 FTH1P19P0C7X4 201 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 GNSP15586 552 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 MAOBP27338 520 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 CD6P30203 668 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 IL12RB1P42701 662 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 RAD23BP54727 409 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 SLC8A3P57103 927 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 YWHAGP61981 247 aaKnown RBP eCLIP9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 SLC14A1Q13336 389 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 ENPP2Q13822 863 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 HNRNPDQ14103 355 aaKnown RBP9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 E2F5Q15329 346 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 GEN1Q17RS7 908 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 EDRF1Q3B7T1 1238 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 PLEKHG6Q3KR16 790 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 ZCWPW2Q504Y3 356 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 RAB41Q5JT25 222 aa9.6□□□□□ -0.87
NIF3L1-203ENST00000409129 ARHGAP17Q68EM7 881 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms