RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 LAMB3Q13751 1172 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 EFHC2Q5JST6 749 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 AMIGO2Q86SJ2 522 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 LDB1Q86U70 411 aaPredicted RBP8.58□□□□□ -1.04
SNX13-201ENST00000409076 PHF13Q86YI8 300 aaPredicted RBP8.58□□□□□ -1.04
SNX13-201ENST00000409076 BRSK2Q8IWQ3 736 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 ST13P4Q8IZP2 240 aaPredicted RBP8.58□□□□□ -1.04
SNX13-201ENST00000409076 TTC13Q8NBP0 860 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 IPMKQ8NFU5 416 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 MIPOL1Q8TD10 442 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 DENND1AQ8TEH3 1009 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 SEPT1Q8WYJ6 367 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 TMEM109Q9BVC6 243 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 CDT1Q9H211 546 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 SYBUQ9NX95 663 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 TMEM216Q9P0N5 145 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 LGALS13Q9UHV8 139 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 TAGLN3Q9UI15 199 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 LZTS1Q9Y250 596 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 NEMP2A6NFY4 417 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 SRRM3A6NNA2 597 aaPredicted RBP8.58□□□□□ -1.04
SNX13-201ENST00000409076 GSTA2P09210 222 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 CYP2C8P10632 490 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 NAMPTP43490 491 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 NDUFV1P49821 464 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 SCNN1BP51168 640 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 KCTD2Q14681 263 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 SFT2D3Q587I9 215 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 SPDYAQ5MJ70 313 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 C6orf52Q5T4I8 152 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 FOXR2Q6PJQ5 311 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 ABHD15Q6UXT9 468 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 NAT8LQ8N9F0 302 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 RPL10LQ96L21 214 aaKnown RBP8.58□□□□□ -1.04
SNX13-201ENST00000409076 NPAS2Q99743 824 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 SUDS3Q9H7L9 328 aaPredicted RBP8.58□□□□□ -1.04
SNX13-201ENST00000409076 RSAD1Q9HA92 442 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 XPNPEP3Q9NQH7 507 aa8.58□□□□□ -1.04
SNX13-201ENST00000409076 CORO1CQ9ULV4 474 aaPredicted RBP8.58□□□□□ -1.04
SNX13-201ENST00000409076 APOC4-APOC2K7ER74 178 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 M0QYT0 321 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 PARNO95453 639 aaKnown RBP8.57□□□□□ -1.04
SNX13-201ENST00000409076 APOC2P02655 101 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 HMBSP08397 361 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 RALBP11234 206 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 CCNB1P14635 433 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 HOXA7P31268 230 aaPredicted RBP8.57□□□□□ -1.04
SNX13-201ENST00000409076 ARPP19P56211 112 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 LRRC23Q53EV4 343 aaPredicted RBP8.57□□□□□ -1.04
SNX13-201ENST00000409076 CERCAMQ5T4B2 595 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 ZNF677Q86XU0 584 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.57□□□□□ -1.04
SNX13-201ENST00000409076 DCBLD1Q8N8Z6 715 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 TRPM4Q8TD43 1214 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 MFSD3Q96ES6 412 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 B3GALT6Q96L58 329 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 STRA6Q9BX79 667 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 SNX25Q9H3E2 840 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 LRRC4Q9HBW1 653 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 LRCH1Q9Y2L9 728 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 COQ4Q9Y3A0 265 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 TK2O00142 265 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 RNASEH1O60930 286 aaKnown RBP8.57□□□□□ -1.04
SNX13-201ENST00000409076 APOEP02649 317 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 LYNP07948 512 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 INSRRP14616 1297 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 NAGLUP54802 743 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 CTBP1Q13363 440 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 USP10Q14694 798 aaKnown RBP8.57□□□□□ -1.04
SNX13-201ENST00000409076 EFHC1Q5JVL4 640 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 ADGRD1Q6QNK2 874 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 BBS12Q6ZW61 710 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 PLD5Q8N7P1 536 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 ZNF781Q8N8C0 355 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 PCDH19Q8TAB3 1148 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 NDNQ99608 321 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 CCDC134Q9H6E4 229 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 DPP3Q9NY33 737 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 TUBGCP4Q9UGJ1 667 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 TLK1Q9UKI8 766 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 SNCAIPQ9Y6H5 919 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 DOCK5Q9H7D0 1870 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 SAC3D1A6NKF1 404 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 MTA2O94776 668 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 ITGAVP06756 1048 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 PMLP29590 882 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 ADIGQ0VDE8 80 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 CDC16Q13042 620 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 PRAMEF19Q5SWL8 479 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 SCIMPQ6UWF3 145 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 TRIML2Q8N7C3 387 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 SLC4A11Q8NBS3 891 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 B4GALNT2Q8NHY0 566 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 SLC2A14Q8TDB8 520 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 INPP5DQ92835 1189 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 APBA2Q99767 749 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 SLC39A3Q9BRY0 314 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 NT5C1AQ9BXI3 368 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 AS3MTQ9HBK9 375 aa8.57□□□□□ -1.04
SNX13-201ENST00000409076 PAK5Q9P286 719 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms