RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 TRIM66O15016 1216 aa19.6■□□□□ 0.73
USP39-202ENST00000409025 CXCL10P02778 98 aa19.6■□□□□ 0.73
USP39-202ENST00000409025 SEMA3BQ13214 749 aa19.6■□□□□ 0.73
USP39-202ENST00000409025 MRPL58Q14197 206 aaKnown RBP19.6■□□□□ 0.73
USP39-202ENST00000409025 PDZD4Q76G19 769 aaPredicted RBP19.6■□□□□ 0.73
USP39-202ENST00000409025 ANKMY2Q8IV38 441 aa19.6■□□□□ 0.73
USP39-202ENST00000409025 CCDC33Q8N5R6 958 aa19.6■□□□□ 0.73
USP39-202ENST00000409025 CCDC110Q8TBZ0 833 aa19.6■□□□□ 0.73
USP39-202ENST00000409025 RNF34Q969K3 372 aa19.6■□□□□ 0.73
USP39-202ENST00000409025 FERMT1Q9BQL6 677 aa19.6■□□□□ 0.73
USP39-202ENST00000409025 TMEM175Q9BSA9 504 aa19.6■□□□□ 0.73
USP39-202ENST00000409025 FRMD8Q9BZ67 464 aaPredicted RBP19.6■□□□□ 0.73
USP39-202ENST00000409025 GPR62Q9BZJ7 368 aa19.6■□□□□ 0.73
USP39-202ENST00000409025 TKTL2Q9H0I9 626 aa19.6■□□□□ 0.73
USP39-202ENST00000409025 SCN5AQ14524 2016 aa19.6■□□□□ 0.73
USP39-202ENST00000409025 TBKBP1A7MCY6 615 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 E7EVH7 732 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 FAM72CH0Y354 149 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 DCLK1O15075 740 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 CDH16O75309 829 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 FGFR3P22607 806 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 ELAVL2Q12926 359 aaKnown RBP19.59■□□□□ 0.73
USP39-202ENST00000409025 PDK1Q15118 436 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 BBS9Q3SYG4 887 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 MSS51Q4VC12 460 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 FAM72AQ5TYM5 149 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 FAM72DQ6L9T8 149 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 LRRC31Q6UY01 552 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 FAM72BQ86X60 149 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 CRIPAKQ8N1N5 446 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 TET1Q8NFU7 2136 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 HTR3CQ8WXA8 447 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 C8orf48Q96LL4 319 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 PPP1R12CQ9BZL4 782 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 MARCH5Q9NX47 278 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 VWA8A3KMH1 1905 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 EXOC1LA0A1B0GW35 172 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 I6L893 689 aaPredicted RBP19.59■□□□□ 0.73
USP39-202ENST00000409025 BANF1O75531 89 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 PHBP35232 272 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 FAAP100Q0VG06 881 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 FUT10Q6P4F1 479 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 VPS52Q8N1B4 723 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 RIBC1Q8N443 379 aaPredicted RBP19.59■□□□□ 0.73
USP39-202ENST00000409025 ATP11CQ8NB49 1132 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 EPAS1Q99814 870 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 LGALS13Q9UHV8 139 aa19.59■□□□□ 0.73
USP39-202ENST00000409025 ZMYND8Q9ULU4 1186 aaPredicted RBP19.59■□□□□ 0.73
USP39-202ENST00000409025 ZNF638Q14966 1978 aaKnown RBP19.58■□□□□ 0.72
USP39-202ENST00000409025 PPP1R12AO14974 1030 aaPredicted RBP19.58■□□□□ 0.72
USP39-202ENST00000409025 STK10O94804 968 aaKnown RBP19.58■□□□□ 0.72
USP39-202ENST00000409025 IGLV3-25P01717 112 aa19.58■□□□□ 0.72
USP39-202ENST00000409025 ERCC2P18074 760 aa19.58■□□□□ 0.72
USP39-202ENST00000409025 LSP1P33241 339 aa19.58■□□□□ 0.72
USP39-202ENST00000409025 MAGEA6P43360 314 aa19.58■□□□□ 0.72
USP39-202ENST00000409025 MAGEA11P43364 429 aa19.58■□□□□ 0.72
USP39-202ENST00000409025 MMP13P45452 471 aa19.58■□□□□ 0.72
USP39-202ENST00000409025 ARHGEF18Q6ZSZ5 1173 aa19.58■□□□□ 0.72
USP39-202ENST00000409025 NUP93Q8N1F7 819 aa19.58■□□□□ 0.72
USP39-202ENST00000409025 FBXO36Q8NEA4 188 aa19.58■□□□□ 0.72
USP39-202ENST00000409025 TOX2Q96NM4 488 aa19.58■□□□□ 0.72
USP39-202ENST00000409025 SELENOSQ9BQE4 189 aa19.58■□□□□ 0.72
USP39-202ENST00000409025 ETNK1Q9HBU6 452 aa19.58■□□□□ 0.72
USP39-202ENST00000409025 RAD54BQ9Y620 910 aa19.58■□□□□ 0.72
USP39-202ENST00000409025 ZNF189O75820 626 aaPredicted RBP19.57■□□□□ 0.72
USP39-202ENST00000409025 GALTP07902 379 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 TSHRP16473 764 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 CYP2C18P33260 490 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 TLE2Q04725 743 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 DDR2Q16832 855 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 FAXCQ5TGI0 409 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 CAPN12Q6ZSI9 719 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 DEFB128Q7Z7B8 93 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 PALM2Q8IXS6 379 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 ARHGEF2Q92974 986 aaKnown RBP19.57■□□□□ 0.72
USP39-202ENST00000409025 PGLYRP2Q96PD5 576 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 LGMNQ99538 433 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 FBXO44Q9H4M3 255 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 PPCSQ9HAB8 311 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 HCSTQ9UBK5 93 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 CTNNAL1Q9UBT7 734 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 OR12D3Q9UGF7 316 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 H7C4K7 107 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 IRAK2O43187 625 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 AMHP03971 560 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 VAV1P15498 845 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 ATP2A2P16615 1042 aaKnown RBP19.57■□□□□ 0.72
USP39-202ENST00000409025 GLUD2P49448 558 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 AP1B1Q10567 949 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 PRKD1Q15139 912 aaPredicted RBP19.57■□□□□ 0.72
USP39-202ENST00000409025 TRIM60Q495X7 471 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 BRMS1LQ5PSV4 323 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 SYCP2LQ5T4T6 812 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 SCD5Q86SK9 330 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 EXOC3L1Q86VI1 746 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 LRRC43Q8N309 656 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 B3GALT6Q96L58 329 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 SMOC2Q9H3U7 446 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 SCML2Q9UQR0 700 aa19.57■□□□□ 0.72
USP39-202ENST00000409025 MYO16Q9Y6X6 1858 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms