RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 TMEM175Q9BSA9 504 aa13.41□□□□□ -0.26
SMARCB1-203ENST00000407082 GOLGA2P5Q9HBQ8 144 aa13.41□□□□□ -0.26
SMARCB1-203ENST00000407082 SENP1Q9P0U3 644 aa13.41□□□□□ -0.26
SMARCB1-203ENST00000407082 CACNG4Q9UBN1 327 aa13.41□□□□□ -0.26
SMARCB1-203ENST00000407082 HESX1Q9UBX0 185 aa13.41□□□□□ -0.26
SMARCB1-203ENST00000407082 TUBGCP4Q9UGJ1 667 aa13.41□□□□□ -0.26
SMARCB1-203ENST00000407082 UBQLN1Q9UMX0 589 aaKnown RBP13.41□□□□□ -0.26
SMARCB1-203ENST00000407082 DUSP12Q9UNI6 340 aa13.41□□□□□ -0.26
SMARCB1-203ENST00000407082 TDRD15B5MCY1 1934 aaKnown RBP13.41□□□□□ -0.26
SMARCB1-203ENST00000407082 GOLGA6L7A0A1B0GV03 622 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 F8VP50 259 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 NRP1O14786 923 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 ZNF189O75820 626 aaPredicted RBP13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 SHBGP04278 402 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 ERBB2P04626 1255 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 DCNP07585 359 aaKnown RBP13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 FAM163BP0C2L3 166 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 GPD1P21695 349 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 KDELR1P24390 212 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 STIP1P31948 543 aaKnown RBP13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 PNPLA4P41247 253 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 MAGEA4P43358 317 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 SLC11A1P49279 550 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 ARSEP51690 589 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 PDK2Q15119 407 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 P3H1Q32P28 736 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 PTPN20Q4JDL3 420 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 BOLA3Q53S33 107 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 PPP1R21Q6ZMI0 780 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 STK32AQ8WU08 396 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 RSAD2Q8WXG1 361 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 RAPGEF5Q92565 580 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 UROC1Q96N76 676 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 PAAF1Q9BRP4 392 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 CNPY3Q9BT09 278 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 FRMD8Q9BZ67 464 aaPredicted RBP13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 ACTR5Q9H9F9 607 aaPredicted RBP13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 PRDM16Q9HAZ2 1276 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 CYLDQ9NQC7 956 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 LGALS13Q9UHV8 139 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 R3HDM2Q9Y2K5 976 aaKnown RBP13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 ACACBO00763 2458 aa13.4□□□□□ -0.26
SMARCB1-203ENST00000407082 CFAP69A5D8W1 941 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 CARNS1A5YM72 827 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 SGK1O00141 431 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 O00370 1275 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 CHN1P15882 459 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 GBP2P32456 591 aaPredicted RBP13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 RPL9P32969 192 aaKnown RBP13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 RFC1P35251 1148 aaPredicted RBP13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 SCNN1AP37088 669 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 GPD2P43304 727 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 CLCNKBP51801 687 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 ZNF143P52747 638 aaPredicted RBP13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 RASA2Q15283 850 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 TAZQ16635 292 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 UPP1Q16831 310 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 CYP4A22Q5TCH4 519 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 FOXR1Q6PIV2 292 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 ARHGEF18Q6ZSZ5 1173 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 CCDC121Q6ZUS5 278 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 ANKS1BQ7Z6G8 1248 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 TDRPQ86YL5 185 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 TMEM130Q8N3G9 435 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 CMASQ8NFW8 434 aaPredicted RBP13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 DYDC1Q8WWB3 177 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 ARHGEF2Q92974 986 aaKnown RBP13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 CABS1Q96KC9 395 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 ZNF560Q96MR9 790 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 RBM15Q96T37 977 aaKnown RBP eCLIP13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 TBCBQ99426 244 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 COLEC11Q9BWP8 271 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 ELOVL4Q9GZR5 314 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 TBC1D17Q9HA65 648 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 METTL5Q9NRN9 209 aaKnown RBP13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 DLL3Q9NYJ7 618 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 NKIRAS1Q9NYS0 192 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 NINJ2Q9NZG7 142 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 SAMD15Q9P1V8 674 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 FETUBQ9UGM5 382 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 DNPEPQ9ULA0 475 aa13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 PRG3Q9Y2Y8 225 aaPredicted RBP13.39□□□□□ -0.27
SMARCB1-203ENST00000407082 DMXL1Q9Y485 3027 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 KRBA1A5PL33 1030 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 ZNF487B1APH4 448 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 APOC4-APOC2K7ER74 178 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 MCF2LO15068 1137 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 PRPSAP2O60256 369 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 TADA2AO75478 443 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 B3GAT3O94766 335 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 ACSL3O95573 720 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 TRUB2O95900 331 aaKnown RBP13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 APOC2P02655 101 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 SP9P0CG40 484 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 LRPAP1P30533 357 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 ACADSBP45954 432 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 RAP1GAPP47736 663 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 NDST1P52848 882 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 ARL4CP56559 192 aa13.38□□□□□ -0.27
SMARCB1-203ENST00000407082 SLC25A11Q02978 314 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms