RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 TADA2BQ86TJ2 420 aa28.49■■■□□ 2.15
CPNE1-203ENST00000397442 ELMOD1Q8N336 334 aa28.49■■■□□ 2.15
CPNE1-203ENST00000397442 C1orf54Q8WWF1 131 aa28.49■■■□□ 2.15
CPNE1-203ENST00000397442 ATG4AQ8WYN0 398 aa28.49■■■□□ 2.15
CPNE1-203ENST00000397442 HAPLN3Q96S86 360 aa28.49■■■□□ 2.15
CPNE1-203ENST00000397442 RNF38Q9H0F5 515 aa28.49■■■□□ 2.15
CPNE1-203ENST00000397442 TLE6Q9H808 572 aa28.49■■■□□ 2.15
CPNE1-203ENST00000397442 SNX10Q9Y5X0 201 aa28.49■■■□□ 2.15
CPNE1-203ENST00000397442 SLC12A8A0AV02 714 aa28.48■■■□□ 2.15
CPNE1-203ENST00000397442 NRG2O14511 850 aaPredicted RBP28.48■■■□□ 2.15
CPNE1-203ENST00000397442 PAGE1O75459 146 aa28.48■■■□□ 2.15
CPNE1-203ENST00000397442 GABRR2P28476 465 aa28.48■■■□□ 2.15
CPNE1-203ENST00000397442 DYNLT1P63172 113 aa28.48■■■□□ 2.15
CPNE1-203ENST00000397442 RBM10P98175 930 aaKnown RBP28.48■■■□□ 2.15
CPNE1-203ENST00000397442 TTC27Q6P3X3 843 aa28.48■■■□□ 2.15
CPNE1-203ENST00000397442 LRRC1Q9BTT6 524 aa28.48■■■□□ 2.15
CPNE1-203ENST00000397442 DCLK3Q9C098 648 aa28.48■■■□□ 2.15
CPNE1-203ENST00000397442 OSBPL2Q9H1P3 480 aa28.48■■■□□ 2.15
CPNE1-203ENST00000397442 EPC1Q9H2F5 836 aa28.48■■■□□ 2.15
CPNE1-203ENST00000397442 LRRC19Q9H756 370 aa28.48■■■□□ 2.15
CPNE1-203ENST00000397442 HCFC1R1Q9NWW0 138 aa28.48■■■□□ 2.15
CPNE1-203ENST00000397442 XPO7Q9UIA9 1087 aaKnown RBP28.48■■■□□ 2.15
CPNE1-203ENST00000397442 SLC2A3P11169 496 aa28.48■■■□□ 2.15
CPNE1-203ENST00000397442 RING1Q06587 406 aa28.48■■■□□ 2.15
CPNE1-203ENST00000397442 ARTNQ5T4W7 220 aa28.48■■■□□ 2.15
CPNE1-203ENST00000397442 SLC9A4Q6AI14 798 aa28.48■■■□□ 2.15
CPNE1-203ENST00000397442 MAGOHBQ96A72 148 aaKnown RBP28.48■■■□□ 2.15
CPNE1-203ENST00000397442 CORO1BQ9BR76 489 aa28.48■■■□□ 2.15
CPNE1-203ENST00000397442 OR12D3Q9UGF7 316 aa28.48■■■□□ 2.15
CPNE1-203ENST00000397442 HBS1LQ9Y450 684 aaKnown RBP28.48■■■□□ 2.15
CPNE1-203ENST00000397442 HNRNPA1P09651 372 aaKnown RBP eCLIP28.47■■■□□ 2.15
CPNE1-203ENST00000397442 NRIP1P48552 1158 aa28.47■■■□□ 2.15
CPNE1-203ENST00000397442 EPHA5P54756 1037 aa28.47■■■□□ 2.15
CPNE1-203ENST00000397442 MRPS25P82663 173 aaKnown RBP28.47■■■□□ 2.15
CPNE1-203ENST00000397442 PLD5Q8N7P1 536 aa28.47■■■□□ 2.15
CPNE1-203ENST00000397442 FAM118BQ9BPY3 351 aa28.47■■■□□ 2.15
CPNE1-203ENST00000397442 MAK16Q9BXY0 300 aaKnown RBP28.47■■■□□ 2.15
CPNE1-203ENST00000397442 SAE1Q9UBE0 346 aaPredicted RBP28.47■■■□□ 2.15
CPNE1-203ENST00000397442 CREB3O43889 395 aa28.46■■■□□ 2.15
CPNE1-203ENST00000397442 CHRNA3P32297 505 aa28.46■■■□□ 2.15
CPNE1-203ENST00000397442 ARL4AP40617 200 aa28.46■■■□□ 2.15
CPNE1-203ENST00000397442 KCNC3Q14003 757 aa28.46■■■□□ 2.15
CPNE1-203ENST00000397442 TFDP2Q14188 446 aa28.46■■■□□ 2.15
CPNE1-203ENST00000397442 CCNG2Q16589 344 aa28.46■■■□□ 2.15
CPNE1-203ENST00000397442 MRPL38Q96DV4 380 aaKnown RBP28.46■■■□□ 2.15
CPNE1-203ENST00000397442 SLC22A12Q96S37 553 aa28.46■■■□□ 2.15
CPNE1-203ENST00000397442 SLITRK6Q9H5Y7 841 aa28.46■■■□□ 2.15
CPNE1-203ENST00000397442 ASAH2Q9NR71 780 aa28.46■■■□□ 2.15
CPNE1-203ENST00000397442 MYO9BQ13459 2157 aa28.46■■■□□ 2.15
CPNE1-203ENST00000397442 NOTCH4Q99466 2003 aa28.45■■■□□ 2.15
CPNE1-203ENST00000397442 H3BRJ5 948 aa28.45■■■□□ 2.15
CPNE1-203ENST00000397442 OLFM2O95897 454 aa28.45■■■□□ 2.15
CPNE1-203ENST00000397442 RHOXF2BP0C7M4 288 aa28.45■■■□□ 2.15
CPNE1-203ENST00000397442 GGCXP38435 758 aa28.45■■■□□ 2.15
CPNE1-203ENST00000397442 KPNA1P52294 538 aaPredicted RBP28.45■■■□□ 2.15
CPNE1-203ENST00000397442 DPYSQ14117 519 aa28.45■■■□□ 2.15
CPNE1-203ENST00000397442 ELF2Q15723 593 aa28.45■■■□□ 2.15
CPNE1-203ENST00000397442 TXNDC8Q6A555 127 aa28.45■■■□□ 2.15
CPNE1-203ENST00000397442 VN1R2Q8NFZ6 395 aa28.45■■■□□ 2.15
CPNE1-203ENST00000397442 HAUS1Q96CS2 278 aa28.45■■■□□ 2.15
CPNE1-203ENST00000397442 RHOXF2Q9BQY4 288 aa28.45■■■□□ 2.15
CPNE1-203ENST00000397442 ANKZF1Q9H8Y5 726 aa28.45■■■□□ 2.15
CPNE1-203ENST00000397442 ARHGEF4Q9NR80 690 aa28.45■■■□□ 2.15
CPNE1-203ENST00000397442 ZDHHC7Q9NXF8 308 aa28.45■■■□□ 2.15
CPNE1-203ENST00000397442 DNMT3BQ9UBC3 853 aaKnown RBP28.45■■■□□ 2.15
CPNE1-203ENST00000397442 AMACRQ9UHK6 382 aa28.45■■■□□ 2.15
CPNE1-203ENST00000397442 DPP7Q9UHL4 492 aa28.45■■■□□ 2.15
CPNE1-203ENST00000397442 APOC4-APOC2K7ER74 178 aa28.45■■■□□ 2.14
CPNE1-203ENST00000397442 RAD51CO43502 376 aa28.45■■■□□ 2.14
CPNE1-203ENST00000397442 MOCS2O96007 188 aaPredicted RBP28.45■■■□□ 2.14
CPNE1-203ENST00000397442 APOC2P02655 101 aa28.45■■■□□ 2.14
CPNE1-203ENST00000397442 HMBSP08397 361 aa28.45■■■□□ 2.14
CPNE1-203ENST00000397442 PECAM1P16284 738 aaPredicted RBP28.45■■■□□ 2.14
CPNE1-203ENST00000397442 AMPD1P23109 780 aa28.45■■■□□ 2.14
CPNE1-203ENST00000397442 COILP38432 576 aaPredicted RBP28.45■■■□□ 2.14
CPNE1-203ENST00000397442 CCR2P41597 374 aa28.45■■■□□ 2.14
CPNE1-203ENST00000397442 HCAR3P49019 387 aa28.45■■■□□ 2.14
CPNE1-203ENST00000397442 KCNQ1P51787 676 aa28.45■■■□□ 2.14
CPNE1-203ENST00000397442 CYP4F8P98187 520 aa28.45■■■□□ 2.14
CPNE1-203ENST00000397442 C8orf74Q6P047 294 aa28.45■■■□□ 2.14
CPNE1-203ENST00000397442 RFX8Q6ZV50 586 aa28.45■■■□□ 2.14
CPNE1-203ENST00000397442 ZNF707Q96C28 371 aaPredicted RBP28.45■■■□□ 2.14
CPNE1-203ENST00000397442 NACA2Q9H009 215 aa28.45■■■□□ 2.14
CPNE1-203ENST00000397442 PCYOX1Q9UHG3 505 aa28.45■■■□□ 2.14
CPNE1-203ENST00000397442 NEU3Q9UQ49 428 aa28.45■■■□□ 2.14
CPNE1-203ENST00000397442 EEF2KO00418 725 aaKnown RBP28.44■■■□□ 2.14
CPNE1-203ENST00000397442 LRIG2O94898 1065 aa28.44■■■□□ 2.14
CPNE1-203ENST00000397442 APOEP02649 317 aa28.44■■■□□ 2.14
CPNE1-203ENST00000397442 MYL4P12829 197 aa28.44■■■□□ 2.14
CPNE1-203ENST00000397442 ZNF697Q5TEC3 545 aa28.44■■■□□ 2.14
CPNE1-203ENST00000397442 PIK3R6Q5UE93 754 aa28.44■■■□□ 2.14
CPNE1-203ENST00000397442 MANEALQ5VSG8 457 aa28.44■■■□□ 2.14
CPNE1-203ENST00000397442 CCDC137Q6PK04 289 aaKnown RBP28.44■■■□□ 2.14
CPNE1-203ENST00000397442 ACTL9Q8TC94 416 aa28.44■■■□□ 2.14
CPNE1-203ENST00000397442 TRAF3IP1Q8TDR0 691 aaPredicted RBP28.44■■■□□ 2.14
CPNE1-203ENST00000397442 CYP2S1Q96SQ9 504 aa28.44■■■□□ 2.14
CPNE1-203ENST00000397442 KLF16Q9BXK1 252 aaPredicted RBP28.44■■■□□ 2.14
CPNE1-203ENST00000397442 SIK2Q9H0K1 926 aa28.44■■■□□ 2.14
CPNE1-203ENST00000397442 HOMER3Q9NSC5 361 aa28.44■■■□□ 2.14
CPNE1-203ENST00000397442 ETNK2Q9NVF9 386 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms