RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 SMARCAL1Q9NZC9 954 aa19.71■□□□□ 0.75
TSPAN4-204ENST00000397404 YBX2Q9Y2T7 364 aaKnown RBP19.71■□□□□ 0.75
TSPAN4-204ENST00000397404 UTP11Q9Y3A2 253 aaKnown RBP19.71■□□□□ 0.75
TSPAN4-204ENST00000397404 SYNJ2BP-COX16A0A087WUM0 186 aa19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 CFAP69A5D8W1 941 aa19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 H0YGN5 161 aa19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 NCAM2O15394 837 aa19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 IL4RP24394 825 aa19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 SERPINB6P35237 376 aa19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 ATXN1P54253 815 aaKnown RBP19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 PITX1P78337 314 aaPredicted RBP19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 XRCC4Q13426 336 aa19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 BYSLQ13895 437 aaKnown RBP19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 CAMK1Q14012 370 aa19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 ZC3H12AQ5D1E8 599 aaKnown RBP19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 KAZNQ674X7 775 aa19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 IFT20Q8IY31 132 aa19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 LZTR1Q8N653 840 aa19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 ADAM32Q8TC27 787 aa19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 MRPS31Q92665 395 aaKnown RBP19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 P3H4Q92791 437 aa19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 CSPG4P5Q96PW8 444 aa19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 KCTD15Q96SI1 283 aaPredicted RBP19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 BRD8Q9H0E9 1235 aa19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 ASAH2Q9NR71 780 aa19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 KLHL11Q9NVR0 708 aa19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 COX16Q9P0S2 106 aa19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 PCDH10Q9P2E7 1040 aa19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 OR12D3Q9UGF7 316 aa19.7■□□□□ 0.74
TSPAN4-204ENST00000397404 A0A1W2PPC1 479 aa19.69■□□□□ 0.74
TSPAN4-204ENST00000397404 EEF2KO00418 725 aaKnown RBP19.69■□□□□ 0.74
TSPAN4-204ENST00000397404 MCF2LO15068 1137 aa19.69■□□□□ 0.74
TSPAN4-204ENST00000397404 CLASP2O75122 1294 aaKnown RBP19.69■□□□□ 0.74
TSPAN4-204ENST00000397404 ECEL1O95672 775 aa19.69■□□□□ 0.74
TSPAN4-204ENST00000397404 OAS1P00973 400 aaKnown RBP19.69■□□□□ 0.74
TSPAN4-204ENST00000397404 F11P03951 625 aa19.69■□□□□ 0.74
TSPAN4-204ENST00000397404 ITGAVP06756 1048 aa19.69■□□□□ 0.74
TSPAN4-204ENST00000397404 TNFRSF8P28908 595 aa19.69■□□□□ 0.74
TSPAN4-204ENST00000397404 STIP1P31948 543 aaKnown RBP19.69■□□□□ 0.74
TSPAN4-204ENST00000397404 RGS19P49795 217 aa19.69■□□□□ 0.74
TSPAN4-204ENST00000397404 EPHA5P54756 1037 aa19.69■□□□□ 0.74
TSPAN4-204ENST00000397404 DRG2P55039 364 aaKnown RBP19.69■□□□□ 0.74
TSPAN4-204ENST00000397404 EFEMP1Q12805 493 aa19.69■□□□□ 0.74
TSPAN4-204ENST00000397404 RFX8Q6ZV50 586 aa19.69■□□□□ 0.74
TSPAN4-204ENST00000397404 DDX50Q9BQ39 737 aaKnown RBP19.69■□□□□ 0.74
TSPAN4-204ENST00000397404 DDX47Q9H0S4 455 aaKnown RBP19.69■□□□□ 0.74
TSPAN4-204ENST00000397404 CATSPERBQ9H7T0 1116 aa19.69■□□□□ 0.74
TSPAN4-204ENST00000397404 SFMBT1Q9UHJ3 866 aa19.69■□□□□ 0.74
TSPAN4-204ENST00000397404 RAB21Q9UL25 225 aa19.69■□□□□ 0.74
TSPAN4-204ENST00000397404 DAPK3O43293 454 aa19.68■□□□□ 0.74
TSPAN4-204ENST00000397404 ERLIN1O75477 346 aa19.68■□□□□ 0.74
TSPAN4-204ENST00000397404 CD48P09326 243 aa19.68■□□□□ 0.74
TSPAN4-204ENST00000397404 KRT10P13645 584 aa19.68■□□□□ 0.74
TSPAN4-204ENST00000397404 HOXC13P31276 330 aa19.68■□□□□ 0.74
TSPAN4-204ENST00000397404 HARS2P49590 506 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-204ENST00000397404 TPI1P60174 286 aa19.68■□□□□ 0.74
TSPAN4-204ENST00000397404 CUL1Q13616 776 aa19.68■□□□□ 0.74
TSPAN4-204ENST00000397404 MAP9Q49MG5 647 aa19.68■□□□□ 0.74
TSPAN4-204ENST00000397404 LRRC31Q6UY01 552 aa19.68■□□□□ 0.74
TSPAN4-204ENST00000397404 KLHL7Q8IXQ5 586 aa19.68■□□□□ 0.74
TSPAN4-204ENST00000397404 LRRN4CLQ8ND94 238 aa19.68■□□□□ 0.74
TSPAN4-204ENST00000397404 SLC22A17Q8WUG5 538 aa19.68■□□□□ 0.74
TSPAN4-204ENST00000397404 FCRL2Q96LA5 508 aaPredicted RBP19.68■□□□□ 0.74
TSPAN4-204ENST00000397404 MAN1C1Q9NR34 630 aa19.68■□□□□ 0.74
TSPAN4-204ENST00000397404 DZANK1Q9NVP4 752 aa19.68■□□□□ 0.74
TSPAN4-204ENST00000397404 CWC15Q9P013 229 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-204ENST00000397404 PPARGC1AQ9UBK2 798 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-204ENST00000397404 HACD1B0YJ81 288 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 LIASO43766 372 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 OLFM2O95897 454 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 SRGAP2BP0DMP2 458 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 PTPN2P17706 415 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 VCPP55072 806 aaKnown RBP19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 MLLT6P55198 1093 aaPredicted RBP19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 ZNF33AQ06730 810 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 DPYSQ14117 519 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 BRD3Q15059 726 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 ELF2Q15723 593 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 CA9Q16790 459 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 RAB6CQ53S08 254 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 C4orf22Q6V702 233 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 ADAT2Q7Z6V5 191 aaKnown RBP19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 LRRC49Q8IUZ0 686 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 PLD5Q8N7P1 536 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 CCDC89Q8N998 374 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 PCDH19Q8TAB3 1148 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 SLC35B2Q8TB61 432 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 SEC14L1Q92503 715 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 ACSF2Q96CM8 615 aaPredicted RBP19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 LRRC1Q9BTT6 524 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 RAB6CQ9H0N0 254 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 NKX2-4Q9H2Z4 354 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 ANKZF1Q9H8Y5 726 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 ZNF510Q9Y2H8 683 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 TMEM265A0A087WTH1 108 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 TCRBV7S2A1N4TA0A589 114 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 SLC12A8A0AV02 714 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 CCDC151A5D8V7 595 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 ZNF197O14709 1029 aa19.67■□□□□ 0.74
TSPAN4-204ENST00000397404 PAGE1O75459 146 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms