RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 TEAD2Q15562 447 aa24.43■■□□□ 1.5
TSPAN4-202ENST00000397396 WHAMMP3Q1A5X7 153 aa24.43■■□□□ 1.5
TSPAN4-202ENST00000397396 ATAT1Q5SQI0 421 aa24.43■■□□□ 1.5
TSPAN4-202ENST00000397396 SYCE2Q6PIF2 218 aa24.43■■□□□ 1.5
TSPAN4-202ENST00000397396 ARL14EPQ8N8R7 260 aaPredicted RBP24.43■■□□□ 1.5
TSPAN4-202ENST00000397396 FAM71BQ8TC56 605 aa24.43■■□□□ 1.5
TSPAN4-202ENST00000397396 MAIP1Q8WWC4 291 aa24.43■■□□□ 1.5
TSPAN4-202ENST00000397396 AZIN2Q96A70 460 aa24.43■■□□□ 1.5
TSPAN4-202ENST00000397396 EPAS1Q99814 870 aa24.43■■□□□ 1.5
TSPAN4-202ENST00000397396 KLF16Q9BXK1 252 aaPredicted RBP24.43■■□□□ 1.5
TSPAN4-202ENST00000397396 OSBPL2Q9H1P3 480 aa24.43■■□□□ 1.5
TSPAN4-202ENST00000397396 SLITRK6Q9H5Y7 841 aa24.43■■□□□ 1.5
TSPAN4-202ENST00000397396 PRDM16Q9HAZ2 1276 aa24.43■■□□□ 1.5
TSPAN4-202ENST00000397396 LSM7Q9UK45 103 aaKnown RBP24.43■■□□□ 1.5
TSPAN4-202ENST00000397396 TTC7AQ9ULT0 858 aaPredicted RBP24.43■■□□□ 1.5
TSPAN4-202ENST00000397396 EFR3BQ9Y2G0 817 aa24.43■■□□□ 1.5
TSPAN4-202ENST00000397396 MOSPD3O75425 235 aa24.42■■□□□ 1.5
TSPAN4-202ENST00000397396 FSHRP23945 695 aa24.42■■□□□ 1.5
TSPAN4-202ENST00000397396 CXCR5P32302 372 aa24.42■■□□□ 1.5
TSPAN4-202ENST00000397396 SLC11A2P49281 568 aa24.42■■□□□ 1.5
TSPAN4-202ENST00000397396 SLC5A9Q2M3M2 681 aa24.42■■□□□ 1.5
TSPAN4-202ENST00000397396 ATP13A4Q4VNC1 1196 aa24.42■■□□□ 1.5
TSPAN4-202ENST00000397396 TFDP3Q5H9I0 405 aa24.42■■□□□ 1.5
TSPAN4-202ENST00000397396 DCAF12L1Q5VU92 463 aa24.42■■□□□ 1.5
TSPAN4-202ENST00000397396 CMTM8Q8IZV2 173 aa24.42■■□□□ 1.5
TSPAN4-202ENST00000397396 RASGEF1CQ8N431 466 aa24.42■■□□□ 1.5
TSPAN4-202ENST00000397396 ACTRT1Q8TDG2 376 aa24.42■■□□□ 1.5
TSPAN4-202ENST00000397396 TCEAL4Q96EI5 215 aa24.42■■□□□ 1.5
TSPAN4-202ENST00000397396 RNF38Q9H0F5 515 aa24.42■■□□□ 1.5
TSPAN4-202ENST00000397396 ARHGAP26Q9UNA1 814 aa24.42■■□□□ 1.5
TSPAN4-202ENST00000397396 ZNF510Q9Y2H8 683 aa24.42■■□□□ 1.5
TSPAN4-202ENST00000397396 MRFAP1Q9Y605 127 aa24.42■■□□□ 1.5
TSPAN4-202ENST00000397396 CPQQ9Y646 472 aa24.42■■□□□ 1.5
TSPAN4-202ENST00000397396 DENND4CQ5VZ89 1909 aa24.42■■□□□ 1.5
TSPAN4-202ENST00000397396 H3BRJ5 948 aa24.41■■□□□ 1.5
TSPAN4-202ENST00000397396 PGRMC1O00264 195 aaKnown RBP24.41■■□□□ 1.5
TSPAN4-202ENST00000397396 PYGMP11217 842 aa24.41■■□□□ 1.5
TSPAN4-202ENST00000397396 WEE1P30291 646 aa24.41■■□□□ 1.5
TSPAN4-202ENST00000397396 MTHFRP42898 656 aa24.41■■□□□ 1.5
TSPAN4-202ENST00000397396 NTHL1P78549 312 aa24.41■■□□□ 1.5
TSPAN4-202ENST00000397396 NRG1Q02297 640 aaPredicted RBP24.41■■□□□ 1.5
TSPAN4-202ENST00000397396 SPOCD1Q6ZMY3 1216 aa24.41■■□□□ 1.5
TSPAN4-202ENST00000397396 RAPGEF5Q92565 580 aa24.41■■□□□ 1.5
TSPAN4-202ENST00000397396 RNF25Q96BH1 459 aaPredicted RBP24.41■■□□□ 1.5
TSPAN4-202ENST00000397396 C1orf74Q96LT6 269 aa24.41■■□□□ 1.5
TSPAN4-202ENST00000397396 FAM161BQ96MY7 647 aa24.41■■□□□ 1.5
TSPAN4-202ENST00000397396 DDX50Q9BQ39 737 aaKnown RBP24.41■■□□□ 1.5
TSPAN4-202ENST00000397396 CALN1Q9BXU9 219 aa24.41■■□□□ 1.5
TSPAN4-202ENST00000397396 SLC46A2Q9BY10 475 aa24.41■■□□□ 1.5
TSPAN4-202ENST00000397396 KIF9Q9HAQ2 790 aa24.41■■□□□ 1.5
TSPAN4-202ENST00000397396 PCDH18Q9HCL0 1135 aa24.41■■□□□ 1.5
TSPAN4-202ENST00000397396 KLHL11Q9NVR0 708 aa24.41■■□□□ 1.5
TSPAN4-202ENST00000397396 CLEC1BQ9P126 229 aa24.41■■□□□ 1.5
TSPAN4-202ENST00000397396 SRGAP2O75044 1071 aa24.4■■□□□ 1.5
TSPAN4-202ENST00000397396 PAGE1O75459 146 aa24.4■■□□□ 1.5
TSPAN4-202ENST00000397396 MOCS2O96007 188 aaPredicted RBP24.4■■□□□ 1.5
TSPAN4-202ENST00000397396 HMBSP08397 361 aa24.4■■□□□ 1.5
TSPAN4-202ENST00000397396 GJA1P17302 382 aa24.4■■□□□ 1.5
TSPAN4-202ENST00000397396 L1CAMP32004 1257 aa24.4■■□□□ 1.5
TSPAN4-202ENST00000397396 ARSEP51690 589 aa24.4■■□□□ 1.5
TSPAN4-202ENST00000397396 ZNF211Q13398 564 aaPredicted RBP24.4■■□□□ 1.5
TSPAN4-202ENST00000397396 MICALL1Q8N3F8 863 aa24.4■■□□□ 1.5
TSPAN4-202ENST00000397396 COG1Q8WTW3 980 aa24.4■■□□□ 1.5
TSPAN4-202ENST00000397396 MAK16Q9BXY0 300 aaKnown RBP24.4■■□□□ 1.5
TSPAN4-202ENST00000397396 GPATCH2LQ9NWQ4 482 aa24.4■■□□□ 1.5
TSPAN4-202ENST00000397396 PRRC2BQ5JSZ5 2229 aaKnown RBP24.4■■□□□ 1.5
TSPAN4-202ENST00000397396 PI4K2BG5E9Z4 385 aa24.39■■□□□ 1.5
TSPAN4-202ENST00000397396 TBX10O75333 385 aa24.39■■□□□ 1.5
TSPAN4-202ENST00000397396 STC2O76061 302 aa24.39■■□□□ 1.5
TSPAN4-202ENST00000397396 CEBPBP17676 345 aa24.39■■□□□ 1.5
TSPAN4-202ENST00000397396 CDKN2BP42772 138 aa24.39■■□□□ 1.5
TSPAN4-202ENST00000397396 HCAR3P49019 387 aa24.39■■□□□ 1.5
TSPAN4-202ENST00000397396 TFDP2Q14188 446 aa24.39■■□□□ 1.5
TSPAN4-202ENST00000397396 DPYSL3Q14195 570 aa24.39■■□□□ 1.5
TSPAN4-202ENST00000397396 TAZQ16635 292 aa24.39■■□□□ 1.5
TSPAN4-202ENST00000397396 PPP6R3Q5H9R7 873 aaPredicted RBP24.39■■□□□ 1.5
TSPAN4-202ENST00000397396 EP400NLQ6ZTU2 488 aa24.39■■□□□ 1.5
TSPAN4-202ENST00000397396 ACSF2Q96CM8 615 aaPredicted RBP24.39■■□□□ 1.5
TSPAN4-202ENST00000397396 ZFRQ96KR1 1074 aaKnown RBP24.39■■□□□ 1.5
TSPAN4-202ENST00000397396 NECTIN4Q96NY8 510 aa24.39■■□□□ 1.5
TSPAN4-202ENST00000397396 KCTD15Q96SI1 283 aaPredicted RBP24.39■■□□□ 1.5
TSPAN4-202ENST00000397396 CYP2S1Q96SQ9 504 aa24.39■■□□□ 1.5
TSPAN4-202ENST00000397396 OSBPL8Q9BZF1 889 aa24.39■■□□□ 1.5
TSPAN4-202ENST00000397396 RRAGDQ9NQL2 400 aaPredicted RBP24.39■■□□□ 1.5
TSPAN4-202ENST00000397396 GDE1Q9NZC3 331 aa24.39■■□□□ 1.5
TSPAN4-202ENST00000397396 C3orf70A6NLC5 250 aaPredicted RBP24.38■■□□□ 1.49
TSPAN4-202ENST00000397396 TJP3O95049 919 aa24.38■■□□□ 1.49
TSPAN4-202ENST00000397396 TCF3P15923 654 aa24.38■■□□□ 1.49
TSPAN4-202ENST00000397396 CORO1AP31146 461 aaKnown RBP24.38■■□□□ 1.49
TSPAN4-202ENST00000397396 CA9Q16790 459 aa24.38■■□□□ 1.49
TSPAN4-202ENST00000397396 STXBP5Q5T5C0 1151 aa24.38■■□□□ 1.49
TSPAN4-202ENST00000397396 MFSD7Q6UXD7 560 aa24.38■■□□□ 1.49
TSPAN4-202ENST00000397396 LRRC31Q6UY01 552 aa24.38■■□□□ 1.49
TSPAN4-202ENST00000397396 KIAA1958Q8N8K9 716 aa24.38■■□□□ 1.49
TSPAN4-202ENST00000397396 MNS1Q8NEH6 495 aa24.38■■□□□ 1.49
TSPAN4-202ENST00000397396 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.38■■□□□ 1.49
TSPAN4-202ENST00000397396 SLC22A12Q96S37 553 aa24.38■■□□□ 1.49
TSPAN4-202ENST00000397396 S1PR5Q9H228 398 aa24.38■■□□□ 1.49
TSPAN4-202ENST00000397396 L2HGDHQ9H9P8 463 aa24.38■■□□□ 1.49
TSPAN4-202ENST00000397396 MTMR10Q9NXD2 777 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms