RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 C16orf46Q6P387 395 aa16.21■□□□□ 0.19
HOXA3-202ENST00000396352 ATG14Q6ZNE5 492 aa16.21■□□□□ 0.19
HOXA3-202ENST00000396352 MARK2Q7KZI7 788 aaKnown RBP16.21■□□□□ 0.19
HOXA3-202ENST00000396352 AFG1LQ8WV93 481 aa16.21■□□□□ 0.19
HOXA3-202ENST00000396352 MMP19Q99542 508 aa16.21■□□□□ 0.19
HOXA3-202ENST00000396352 POLR2AP24928 1970 aaKnown RBP16.21■□□□□ 0.19
HOXA3-202ENST00000396352 A0A088AWK7 358 aa16.21■□□□□ 0.19
HOXA3-202ENST00000396352 AHCYL1O43865 530 aa16.21■□□□□ 0.19
HOXA3-202ENST00000396352 USP2O75604 605 aaPredicted RBP16.21■□□□□ 0.19
HOXA3-202ENST00000396352 STILQ15468 1287 aa16.21■□□□□ 0.19
HOXA3-202ENST00000396352 SESTD1Q86VW0 696 aa16.21■□□□□ 0.19
HOXA3-202ENST00000396352 MRPL45Q9BRJ2 306 aaKnown RBP16.21■□□□□ 0.19
HOXA3-202ENST00000396352 PIDD1Q9HB75 910 aa16.21■□□□□ 0.19
HOXA3-202ENST00000396352 SPATS2LQ9NUQ6 558 aaKnown RBP16.21■□□□□ 0.19
HOXA3-202ENST00000396352 FAM49BQ9NUQ9 324 aa16.21■□□□□ 0.19
HOXA3-202ENST00000396352 DNAJB4Q9UDY4 337 aa16.21■□□□□ 0.19
HOXA3-202ENST00000396352 GTF2IRD1Q9UHL9 959 aa16.21■□□□□ 0.19
HOXA3-202ENST00000396352 PPM1HQ9ULR3 514 aa16.21■□□□□ 0.19
HOXA3-202ENST00000396352 C2CD2Q9Y426 696 aa16.21■□□□□ 0.19
HOXA3-202ENST00000396352 MFHAS1Q9Y4C4 1052 aa16.21■□□□□ 0.19
HOXA3-202ENST00000396352 WDR27A2RRH5 827 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 IGBP1P78318 339 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 POU5F1BQ06416 359 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 THEMIS2Q5TEJ8 643 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 ACOT1Q86TX2 421 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 IFNLR1Q8IU57 520 aaPredicted RBP16.2■□□□□ 0.18
HOXA3-202ENST00000396352 TTC39CQ8N584 583 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 PIWIL2Q8TC59 973 aaKnown RBP16.2■□□□□ 0.18
HOXA3-202ENST00000396352 TSC22D3Q99576 134 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 SIKE1Q9BRV8 207 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 APOL6Q9BWW8 343 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 GPAMQ9HCL2 828 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 SORCS3Q9UPU3 1222 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 ZNF638Q14966 1978 aaKnown RBP16.2■□□□□ 0.18
HOXA3-202ENST00000396352 SMIM24O75264 130 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 PRKCGP05129 697 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 C6orf222P0C671 652 aaPredicted RBP16.2■□□□□ 0.18
HOXA3-202ENST00000396352 VAV1P15498 845 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 RPL10AP62906 217 aaKnown RBP16.2■□□□□ 0.18
HOXA3-202ENST00000396352 PDE1CQ14123 709 aaPredicted RBP16.2■□□□□ 0.18
HOXA3-202ENST00000396352 C1orf146Q5VVC0 180 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 DENND5BQ6ZUT9 1274 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 MAVSQ7Z434 540 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 LINC01465Q8N7H1 131 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 CLEC4CQ8WTT0 213 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 DHX35Q9H5Z1 703 aaKnown RBP16.2■□□□□ 0.18
HOXA3-202ENST00000396352 DTLQ9NZJ0 730 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 SOX13Q9UN79 622 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 DNAJC16Q9Y2G8 782 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 TPP1O14773 563 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 NR2C2P49116 596 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 CACNA2D1P54289 1103 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 CRADDP78560 199 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 PCLAFQ15004 111 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 N4BP2L1Q5TBK1 243 aaPredicted RBP16.2■□□□□ 0.18
HOXA3-202ENST00000396352 NCBP2-AS2Q69YL0 99 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 SLC25A41Q8N5S1 370 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 CENPIQ92674 756 aaPredicted RBP16.2■□□□□ 0.18
HOXA3-202ENST00000396352 CSPG4P5Q96PW8 444 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 KCTD15Q96SI1 283 aaPredicted RBP16.2■□□□□ 0.18
HOXA3-202ENST00000396352 GCOM2Q9BZD3 368 aaPredicted RBP16.2■□□□□ 0.18
HOXA3-202ENST00000396352 CXCL16Q9H2A7 254 aa16.2■□□□□ 0.18
HOXA3-202ENST00000396352 MAGEA13PA6NCF6 341 aa16.19■□□□□ 0.18
HOXA3-202ENST00000396352 TOMM70O94826 608 aa16.19■□□□□ 0.18
HOXA3-202ENST00000396352 PTPN9P43378 593 aa16.19■□□□□ 0.18
HOXA3-202ENST00000396352 AP2B1P63010 937 aa16.19■□□□□ 0.18
HOXA3-202ENST00000396352 GSTA3Q16772 222 aa16.19■□□□□ 0.18
HOXA3-202ENST00000396352 C6orf163Q5TEZ5 329 aa16.19■□□□□ 0.18
HOXA3-202ENST00000396352 TMCO4Q5TGY1 634 aa16.19■□□□□ 0.18
HOXA3-202ENST00000396352 IZUMO2Q6UXV1 221 aa16.19■□□□□ 0.18
HOXA3-202ENST00000396352 PACS1Q6VY07 963 aa16.19■□□□□ 0.18
HOXA3-202ENST00000396352 ACMSDQ8TDX5 336 aa16.19■□□□□ 0.18
HOXA3-202ENST00000396352 AP4E1Q9UPM8 1137 aa16.19■□□□□ 0.18
HOXA3-202ENST00000396352 USP3Q9Y6I4 520 aa16.19■□□□□ 0.18
HOXA3-202ENST00000396352 MYO18AQ92614 2054 aaKnown RBP16.19■□□□□ 0.18
HOXA3-202ENST00000396352 PLIN3O60664 434 aa16.19■□□□□ 0.18
HOXA3-202ENST00000396352 USP1O94782 785 aa16.19■□□□□ 0.18
HOXA3-202ENST00000396352 CRABP2P29373 138 aa16.19■□□□□ 0.18
HOXA3-202ENST00000396352 SLC1A6P48664 564 aa16.19■□□□□ 0.18
HOXA3-202ENST00000396352 HEATR6Q6AI08 1181 aaKnown RBP16.19■□□□□ 0.18
HOXA3-202ENST00000396352 WDR75Q8IWA0 830 aaKnown RBP16.19■□□□□ 0.18
HOXA3-202ENST00000396352 OLFM3Q96PB7 478 aa16.19■□□□□ 0.18
HOXA3-202ENST00000396352 XPNPEP3Q9NQH7 507 aa16.19■□□□□ 0.18
HOXA3-202ENST00000396352 NDE1Q9NXR1 346 aa16.19■□□□□ 0.18
HOXA3-202ENST00000396352 PSAT1Q9Y617 370 aa16.19■□□□□ 0.18
HOXA3-202ENST00000396352 RALGAPA2Q2PPJ7 1873 aa16.19■□□□□ 0.18
HOXA3-202ENST00000396352 F5H423 210 aaPredicted RBP16.18■□□□□ 0.18
HOXA3-202ENST00000396352 KIF3CO14782 793 aa16.18■□□□□ 0.18
HOXA3-202ENST00000396352 DGKIO75912 1065 aa16.18■□□□□ 0.18
HOXA3-202ENST00000396352 SETSIPP0DME0 302 aa16.18■□□□□ 0.18
HOXA3-202ENST00000396352 INSRRP14616 1297 aa16.18■□□□□ 0.18
HOXA3-202ENST00000396352 ZFXP17010 805 aaPredicted RBP16.18■□□□□ 0.18
HOXA3-202ENST00000396352 ARRB2P32121 409 aa16.18■□□□□ 0.18
HOXA3-202ENST00000396352 PDE1BQ01064 536 aa16.18■□□□□ 0.18
HOXA3-202ENST00000396352 CCDC185Q8N715 623 aa16.18■□□□□ 0.18
HOXA3-202ENST00000396352 GSTCDQ8NEC7 633 aa16.18■□□□□ 0.18
HOXA3-202ENST00000396352 SORT1Q99523 831 aa16.18■□□□□ 0.18
HOXA3-202ENST00000396352 ECSITQ9BQ95 431 aa16.18■□□□□ 0.18
HOXA3-202ENST00000396352 LPIN3Q9BQK8 851 aa16.18■□□□□ 0.18
HOXA3-202ENST00000396352 STN1Q9H668 368 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms