RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 CDKL3Q8IVW4 592 aaPredicted RBP18.27■□□□□ 0.51
SHTN1-203ENST00000392901 ZBED8Q8IZ13 594 aa18.27■□□□□ 0.51
SHTN1-203ENST00000392901 LRRC43Q8N309 656 aa18.27■□□□□ 0.51
SHTN1-203ENST00000392901 CCDC110Q8TBZ0 833 aa18.27■□□□□ 0.51
SHTN1-203ENST00000392901 MDM1Q8TC05 714 aa18.27■□□□□ 0.51
SHTN1-203ENST00000392901 BCL7CQ8WUZ0 217 aaPredicted RBP18.27■□□□□ 0.51
SHTN1-203ENST00000392901 ABCC13Q9NSE7 274 aa18.27■□□□□ 0.51
SHTN1-203ENST00000392901 CTNNAL1Q9UBT7 734 aa18.27■□□□□ 0.51
SHTN1-203ENST00000392901 XPO7Q9UIA9 1087 aaKnown RBP18.27■□□□□ 0.51
SHTN1-203ENST00000392901 SLC27A5Q9Y2P5 690 aa18.27■□□□□ 0.51
SHTN1-203ENST00000392901 SNX10Q9Y5X0 201 aa18.27■□□□□ 0.51
SHTN1-203ENST00000392901 NR2E3Q9Y5X4 410 aa18.27■□□□□ 0.51
SHTN1-203ENST00000392901 OR6C75A6NL08 312 aa18.26■□□□□ 0.51
SHTN1-203ENST00000392901 A6NNZ2 444 aa18.26■□□□□ 0.51
SHTN1-203ENST00000392901 MFSD11O43934 449 aa18.26■□□□□ 0.51
SHTN1-203ENST00000392901 BANF1O75531 89 aa18.26■□□□□ 0.51
SHTN1-203ENST00000392901 CXCR3P49682 368 aa18.26■□□□□ 0.51
SHTN1-203ENST00000392901 PDIA2Q13087 525 aaKnown RBP18.26■□□□□ 0.51
SHTN1-203ENST00000392901 HIF1AQ16665 826 aa18.26■□□□□ 0.51
SHTN1-203ENST00000392901 TUBB8Q3ZCM7 444 aa18.26■□□□□ 0.51
SHTN1-203ENST00000392901 CCDC38Q502W7 563 aa18.26■□□□□ 0.51
SHTN1-203ENST00000392901 SLC45A4Q5BKX6 768 aa18.26■□□□□ 0.51
SHTN1-203ENST00000392901 TNFAIP8L3Q5GJ75 292 aa18.26■□□□□ 0.51
SHTN1-203ENST00000392901 RSPO2Q6UXX9 243 aaPredicted RBP18.26■□□□□ 0.51
SHTN1-203ENST00000392901 CENPUQ71F23 418 aa18.26■□□□□ 0.51
SHTN1-203ENST00000392901 SCD5Q86SK9 330 aa18.26■□□□□ 0.51
SHTN1-203ENST00000392901 NUP93Q8N1F7 819 aa18.26■□□□□ 0.51
SHTN1-203ENST00000392901 BCAS4Q8TDM0 211 aa18.26■□□□□ 0.51
SHTN1-203ENST00000392901 TMEM175Q9BSA9 504 aa18.26■□□□□ 0.51
SHTN1-203ENST00000392901 TRIM62Q9BVG3 475 aa18.26■□□□□ 0.51
SHTN1-203ENST00000392901 NMUR1Q9HB89 426 aa18.26■□□□□ 0.51
SHTN1-203ENST00000392901 RAB6BQ9NRW1 208 aa18.26■□□□□ 0.51
SHTN1-203ENST00000392901 PAK5Q9P286 719 aa18.26■□□□□ 0.51
SHTN1-203ENST00000392901 PCDH10Q9P2E7 1040 aa18.26■□□□□ 0.51
SHTN1-203ENST00000392901 SFMBT1Q9UHJ3 866 aa18.26■□□□□ 0.51
SHTN1-203ENST00000392901 TBX21Q9UL17 535 aa18.26■□□□□ 0.51
SHTN1-203ENST00000392901 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.26■□□□□ 0.51
SHTN1-203ENST00000392901 TMEM63AO94886 807 aa18.25■□□□□ 0.51
SHTN1-203ENST00000392901 AGTP01019 485 aa18.25■□□□□ 0.51
SHTN1-203ENST00000392901 ALDH7A1P49419 539 aaKnown RBP18.25■□□□□ 0.51
SHTN1-203ENST00000392901 TPI1P60174 286 aa18.25■□□□□ 0.51
SHTN1-203ENST00000392901 SCAPQ12770 1279 aa18.25■□□□□ 0.51
SHTN1-203ENST00000392901 XRCC4Q13426 336 aa18.25■□□□□ 0.51
SHTN1-203ENST00000392901 FAXCQ5TGI0 409 aa18.25■□□□□ 0.51
SHTN1-203ENST00000392901 CAPN12Q6ZSI9 719 aa18.25■□□□□ 0.51
SHTN1-203ENST00000392901 FAM43BQ6ZT52 329 aaPredicted RBP18.25■□□□□ 0.51
SHTN1-203ENST00000392901 CROCCP2Q86T23 111 aa18.25■□□□□ 0.51
SHTN1-203ENST00000392901 LGMNQ99538 433 aa18.25■□□□□ 0.51
SHTN1-203ENST00000392901 TANC1Q9C0D5 1861 aa18.25■□□□□ 0.51
SHTN1-203ENST00000392901 A0A1W2PQH9 124 aa18.25■□□□□ 0.51
SHTN1-203ENST00000392901 FOXO6A8MYZ6 492 aa18.25■□□□□ 0.51
SHTN1-203ENST00000392901 TRIM66O15016 1216 aa18.25■□□□□ 0.51
SHTN1-203ENST00000392901 IVLP07476 585 aa18.25■□□□□ 0.51
SHTN1-203ENST00000392901 SEC24CP53992 1094 aa18.25■□□□□ 0.51
SHTN1-203ENST00000392901 ELAVL2Q12926 359 aaKnown RBP18.25■□□□□ 0.51
SHTN1-203ENST00000392901 DPYSQ14117 519 aa18.25■□□□□ 0.51
SHTN1-203ENST00000392901 FNBP1LQ5T0N5 605 aa18.25■□□□□ 0.51
SHTN1-203ENST00000392901 HEATR6Q6AI08 1181 aaKnown RBP18.25■□□□□ 0.51
SHTN1-203ENST00000392901 CCDC13Q8IYE1 715 aa18.25■□□□□ 0.51
SHTN1-203ENST00000392901 RTP4Q96DX8 246 aa18.25■□□□□ 0.51
SHTN1-203ENST00000392901 C8orf48Q96LL4 319 aa18.25■□□□□ 0.51
SHTN1-203ENST00000392901 OR12D3Q9UGF7 316 aa18.25■□□□□ 0.51
SHTN1-203ENST00000392901 ERCC2P18074 760 aa18.24■□□□□ 0.51
SHTN1-203ENST00000392901 ARL4CP56559 192 aa18.24■□□□□ 0.51
SHTN1-203ENST00000392901 USP46P62068 366 aa18.24■□□□□ 0.51
SHTN1-203ENST00000392901 MGAT5BQ3V5L5 792 aa18.24■□□□□ 0.51
SHTN1-203ENST00000392901 C1orf53Q5VUE5 145 aa18.24■□□□□ 0.51
SHTN1-203ENST00000392901 MFSD5Q6N075 450 aa18.24■□□□□ 0.51
SHTN1-203ENST00000392901 CNKSR3Q6P9H4 555 aa18.24■□□□□ 0.51
SHTN1-203ENST00000392901 PRSS55Q6UWB4 352 aaPredicted RBP18.24■□□□□ 0.51
SHTN1-203ENST00000392901 RNF19BQ6ZMZ0 732 aa18.24■□□□□ 0.51
SHTN1-203ENST00000392901 BZW1Q7L1Q6 419 aaKnown RBP18.24■□□□□ 0.51
SHTN1-203ENST00000392901 TMCO2Q7Z6W1 182 aaPredicted RBP18.24■□□□□ 0.51
SHTN1-203ENST00000392901 ANKMY2Q8IV38 441 aa18.24■□□□□ 0.51
SHTN1-203ENST00000392901 TFB1MQ8WVM0 346 aaKnown RBP18.24■□□□□ 0.51
SHTN1-203ENST00000392901 CASP10Q92851 521 aa18.24■□□□□ 0.51
SHTN1-203ENST00000392901 PAWRQ96IZ0 340 aaKnown RBP18.24■□□□□ 0.51
SHTN1-203ENST00000392901 PKNOX2Q96KN3 472 aa18.24■□□□□ 0.51
SHTN1-203ENST00000392901 TTPALQ9BTX7 342 aa18.24■□□□□ 0.51
SHTN1-203ENST00000392901 MSI1O43347 362 aaKnown RBP18.24■□□□□ 0.51
SHTN1-203ENST00000392901 CLTBP09497 229 aa18.24■□□□□ 0.51
SHTN1-203ENST00000392901 SEMA3BQ13214 749 aa18.24■□□□□ 0.51
SHTN1-203ENST00000392901 ZNF638Q14966 1978 aaKnown RBP18.24■□□□□ 0.51
SHTN1-203ENST00000392901 MSS51Q4VC12 460 aa18.24■□□□□ 0.51
SHTN1-203ENST00000392901 FAM117BQ6P1L5 589 aa18.24■□□□□ 0.51
SHTN1-203ENST00000392901 BEND5Q7L4P6 421 aa18.24■□□□□ 0.51
SHTN1-203ENST00000392901 TP53INP2Q8IXH6 220 aa18.24■□□□□ 0.51
SHTN1-203ENST00000392901 CCNYQ8ND76 341 aa18.24■□□□□ 0.51
SHTN1-203ENST00000392901 SERPINB12Q96P63 405 aa18.24■□□□□ 0.51
SHTN1-203ENST00000392901 OLFM3Q96PB7 478 aa18.24■□□□□ 0.51
SHTN1-203ENST00000392901 QKIQ96PU8 341 aaKnown RBP eCLIP18.24■□□□□ 0.512e-6■■□□□ 13
SHTN1-203ENST00000392901 SEPT5Q99719 369 aaPredicted RBP18.24■□□□□ 0.51
SHTN1-203ENST00000392901 SIK2Q9H0K1 926 aa18.24■□□□□ 0.51
SHTN1-203ENST00000392901 PPANQ9NQ55 473 aaKnown RBP18.24■□□□□ 0.51
SHTN1-203ENST00000392901 OSER1Q9NX31 292 aa18.24■□□□□ 0.51
SHTN1-203ENST00000392901 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.23■□□□□ 0.51
SHTN1-203ENST00000392901 MTMR11A4FU01 709 aa18.23■□□□□ 0.51
SHTN1-203ENST00000392901 DCLK1O15075 740 aa18.23■□□□□ 0.51
SHTN1-203ENST00000392901 ALOX15BO15296 676 aa18.23■□□□□ 0.51
SHTN1-203ENST00000392901 IRAK2O43187 625 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms