RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 SCINQ9Y6U3 715 aa7.04□□□□□ -1.28
UBBP1-201ENST00000392399 TCRBV5S1A1TA0A578 114 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 KANSL1LA0AUZ9 987 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 KRBA1A5PL33 1030 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 TMEM221A6NGB7 291 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 C2CD4BA6NLJ0 364 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 TMCO5BA8MYB1 307 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 SPECC1L-ADORA2AF8WAN1 911 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 M0QYT0 321 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 M0R296 226 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 HOXC11O43248 304 aaPredicted RBP7.03□□□□□ -1.28
UBBP1-201ENST00000392399 ACSL4O60488 711 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 GRAP2O75791 330 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 KLKB1P03952 638 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 CYBBP04839 570 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 HMBSP08397 361 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 PLEKP08567 350 aaPredicted RBP7.03□□□□□ -1.28
UBBP1-201ENST00000392399 ARSAP15289 507 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 PDGFRAP16234 1089 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 ABCB4P21439 1286 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 RRM1P23921 792 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 SDC4P31431 198 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 RFC1P35251 1148 aaPredicted RBP7.03□□□□□ -1.28
UBBP1-201ENST00000392399 FLT3P36888 993 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 EIF2DP41214 584 aaKnown RBP7.03□□□□□ -1.28
UBBP1-201ENST00000392399 PTPN9P43378 593 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 CXCR3P49682 368 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 CLCN5P51795 746 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 GSDMDP57764 484 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 DEUP1Q05D60 604 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 TNK2Q07912 1038 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 MAMLD1Q13495 774 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 ACAP1Q15027 740 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 C2CD6Q53TS8 623 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 PPP1R15BQ5SWA1 713 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 MPP7Q5T2T1 576 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 TRIM68Q6AZZ1 485 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 DCUN1D2Q6PH85 259 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 RHBDF2Q6PJF5 856 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 TPRG1Q6ZUI0 275 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 NUDT18Q6ZVK8 323 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 STRADAQ7RTN6 431 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 BNIPLQ7Z465 357 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 TAC4Q86UU9 113 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 TMTC1Q8IUR5 882 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 DENND1CQ8IV53 801 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 BBS7Q8IWZ6 715 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 SUGP1Q8IWZ8 645 aaKnown RBP7.03□□□□□ -1.28
UBBP1-201ENST00000392399 FAM217AQ8IXS0 508 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 SIX5Q8N196 739 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 ZNF557Q8N988 423 aaPredicted RBP7.03□□□□□ -1.28
UBBP1-201ENST00000392399 CCDC26Q8TAB7 109 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 FNIP1Q8TF40 1166 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 RXFP2Q8WXD0 754 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 FAM3CQ92520 227 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 CENPIQ92674 756 aaPredicted RBP7.03□□□□□ -1.28
UBBP1-201ENST00000392399 RNF34Q969K3 372 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 BTN2A3PQ96KV6 586 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 FCRL2Q96LA5 508 aaPredicted RBP7.03□□□□□ -1.28
UBBP1-201ENST00000392399 C1orf74Q96LT6 269 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 XPO6Q96QU8 1125 aaKnown RBP7.03□□□□□ -1.28
UBBP1-201ENST00000392399 CHP1Q99653 195 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 SLC2A11Q9BYW1 496 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 MFSD1Q9H3U5 465 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 EPHX3Q9H6B9 360 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 WDCPQ9H6R7 721 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 FAM204AQ9H8W3 233 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 LUC7LQ9NQ29 371 aaKnown RBP7.03□□□□□ -1.28
UBBP1-201ENST00000392399 METTL5Q9NRN9 209 aaKnown RBP7.03□□□□□ -1.28
UBBP1-201ENST00000392399 DDIT4Q9NX09 232 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 TAS2R14Q9NYV8 317 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 GTSE1Q9NYZ3 720 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 MARK1Q9P0L2 795 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 CNOT8Q9UFF9 292 aaKnown RBP7.03□□□□□ -1.28
UBBP1-201ENST00000392399 LCMT1Q9UIC8 334 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 PIAS3Q9Y6X2 628 aa7.03□□□□□ -1.28
UBBP1-201ENST00000392399 MYO16Q9Y6X6 1858 aa7.02□□□□□ -1.28
UBBP1-201ENST00000392399 A0A0A0MRY4 1105 aa7.02□□□□□ -1.29
UBBP1-201ENST00000392399 TMEM191CA6NGB0 347 aa7.02□□□□□ -1.29
UBBP1-201ENST00000392399 KCNU1A8MYU2 1149 aa7.02□□□□□ -1.29
UBBP1-201ENST00000392399 PRR33A8MZF0 331 aa7.02□□□□□ -1.29
UBBP1-201ENST00000392399 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.02□□□□□ -1.29
UBBP1-201ENST00000392399 TRDMT1O14717 391 aaKnown RBP7.02□□□□□ -1.29
UBBP1-201ENST00000392399 MSI1O43347 362 aaKnown RBP7.02□□□□□ -1.29
UBBP1-201ENST00000392399 CYP17A1P05093 508 aa7.02□□□□□ -1.29
UBBP1-201ENST00000392399 H2AFZP0C0S5 128 aa7.02□□□□□ -1.29
UBBP1-201ENST00000392399 ADH5P11766 374 aa7.02□□□□□ -1.29
UBBP1-201ENST00000392399 GPD1P21695 349 aa7.02□□□□□ -1.29
UBBP1-201ENST00000392399 DRD1P21728 446 aa7.02□□□□□ -1.29
UBBP1-201ENST00000392399 FECHP22830 423 aa7.02□□□□□ -1.29
UBBP1-201ENST00000392399 CTHP32929 405 aa7.02□□□□□ -1.29
UBBP1-201ENST00000392399 GJA4P35212 333 aa7.02□□□□□ -1.29
UBBP1-201ENST00000392399 RDXP35241 583 aaKnown RBP7.02□□□□□ -1.29
UBBP1-201ENST00000392399 CYLC1P35663 651 aaPredicted RBP7.02□□□□□ -1.29
UBBP1-201ENST00000392399 MAGEA9P43362 315 aa7.02□□□□□ -1.29
UBBP1-201ENST00000392399 SULT1E1P49888 294 aa7.02□□□□□ -1.29
UBBP1-201ENST00000392399 ZNF143P52747 638 aaPredicted RBP7.02□□□□□ -1.29
UBBP1-201ENST00000392399 NME3Q13232 169 aa7.02□□□□□ -1.29
UBBP1-201ENST00000392399 E2F5Q15329 346 aa7.02□□□□□ -1.29
UBBP1-201ENST00000392399 ARL13BQ3SXY8 428 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms