RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 PPP2R5DQ14738 602 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 TMEM259Q4ZIN3 620 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 SPDYAQ5MJ70 313 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 TMCO4Q5TGY1 634 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 SLFN12LQ6IEE8 588 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 ZNF606Q8WXB4 792 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 UBAP1Q9NZ09 502 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 PLLPQ9Y342 182 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 GRAP2O75791 330 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 CDK4P11802 303 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 STT3AP46977 705 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 SERPINB8P50452 374 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 HDAC4P56524 1084 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 GPAT2Q6NUI2 795 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 TRMT10BQ6PF06 316 aaKnown RBP14.28□□□□□ -0.12
SDC1-202ENST00000381150 HACE1Q8IYU2 909 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 UNC5BQ8IZJ1 945 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 PHTF2Q8N3S3 785 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 METTL25Q8N6Q8 603 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 TTC13Q8NBP0 860 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 FAM156AQ8NDB6 213 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 OR5B17Q8NGF7 314 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 SLC44A1Q8WWI5 657 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 NXF1Q9UBU9 619 aaKnown RBP14.28□□□□□ -0.12
SDC1-202ENST00000381150 LRRIQ4A6NIV6 560 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 SEC24DO94855 1032 aaPredicted RBP14.28□□□□□ -0.12
SDC1-202ENST00000381150 CSPG5O95196 566 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 RFC1P35251 1148 aaPredicted RBP14.28□□□□□ -0.12
SDC1-202ENST00000381150 CDKN2BP42772 138 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 MAPK10P53779 464 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 DPYSL3Q14195 570 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 PDPK2PQ6A1A2 396 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 FRMD7Q6ZUT3 714 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 RBM12BQ8IXT5 1001 aaKnown RBP14.28□□□□□ -0.12
SDC1-202ENST00000381150 NAT8LQ8N9F0 302 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 SLC7A3Q8WY07 619 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 RNPEPQ9H4A4 650 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 RBAKQ9NYW8 714 aaPredicted RBP14.28□□□□□ -0.12
SDC1-202ENST00000381150 PTTG2Q9NZH5 202 aa14.28□□□□□ -0.12
SDC1-202ENST00000381150 ARHGAP10A1A4S6 786 aa14.27□□□□□ -0.12
SDC1-202ENST00000381150 SOCS7O14512 581 aa14.27□□□□□ -0.12
SDC1-202ENST00000381150 SIN3BO75182 1162 aa14.27□□□□□ -0.12
SDC1-202ENST00000381150 MAFO75444 373 aaPredicted RBP14.27□□□□□ -0.12
SDC1-202ENST00000381150 SERPINA6P08185 405 aa14.27□□□□□ -0.12
SDC1-202ENST00000381150 PTP4A2Q12974 167 aa14.27□□□□□ -0.12
SDC1-202ENST00000381150 MPP3Q13368 585 aa14.27□□□□□ -0.12
SDC1-202ENST00000381150 CUL2Q13617 745 aa14.27□□□□□ -0.12
SDC1-202ENST00000381150 ITPRIPL1Q6GPH6 555 aa14.27□□□□□ -0.12
SDC1-202ENST00000381150 DEPTORQ8TB45 409 aa14.27□□□□□ -0.12
SDC1-202ENST00000381150 CCDC106Q9BWC9 280 aa14.27□□□□□ -0.12
SDC1-202ENST00000381150 NUB1Q9Y5A7 615 aa14.27□□□□□ -0.12
SDC1-202ENST00000381150 KRT38O76015 456 aa14.27□□□□□ -0.13
SDC1-202ENST00000381150 LDHAP00338 332 aaKnown RBP14.27□□□□□ -0.13
SDC1-202ENST00000381150 PENKP01210 267 aaPredicted RBP14.27□□□□□ -0.13
SDC1-202ENST00000381150 ITGAVP06756 1048 aa14.27□□□□□ -0.13
SDC1-202ENST00000381150 OSTNP61366 133 aa14.27□□□□□ -0.13
SDC1-202ENST00000381150 NAA20P61599 178 aa14.27□□□□□ -0.13
SDC1-202ENST00000381150 FLOT2Q14254 428 aa14.27□□□□□ -0.13
SDC1-202ENST00000381150 RARS2Q5T160 578 aaKnown RBP14.27□□□□□ -0.13
SDC1-202ENST00000381150 CHSY1Q86X52 802 aa14.27□□□□□ -0.13
SDC1-202ENST00000381150 UBR7Q8N806 425 aa14.27□□□□□ -0.13
SDC1-202ENST00000381150 MZB1Q8WU39 189 aa14.27□□□□□ -0.13
SDC1-202ENST00000381150 CGRRF1Q99675 332 aa14.27□□□□□ -0.13
SDC1-202ENST00000381150 MSTO1Q9BUK6 570 aa14.27□□□□□ -0.13
SDC1-202ENST00000381150 TTC36A6NLP5 189 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 XPOTO43592 962 aaKnown RBP14.26□□□□□ -0.13
SDC1-202ENST00000381150 MSCO60682 206 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 TRMUO75648 421 aaKnown RBP14.26□□□□□ -0.13
SDC1-202ENST00000381150 CNMDO75829 334 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 STAT5BP51692 787 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 KRT80Q6KB66 452 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 TMIGD2Q96BF3 282 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 ZNF668Q96K58 619 aaPredicted RBP14.26□□□□□ -0.13
SDC1-202ENST00000381150 SPATC1LQ9H0A9 340 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 PPCSQ9HAB8 311 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 GPAMQ9HCL2 828 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 PFDN4Q9NQP4 134 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 ZNF232Q9UNY5 417 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 GNEQ9Y223 722 aaKnown RBP14.26□□□□□ -0.13
SDC1-202ENST00000381150 FIS1Q9Y3D6 152 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 NR2E3Q9Y5X4 410 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 SBF1O95248 1867 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 ZBTB42B2RXF5 422 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 CSDE1O75534 798 aaKnown RBP14.26□□□□□ -0.13
SDC1-202ENST00000381150 CRTAMO95727 393 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 KRT3P12035 628 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 ABCG1P45844 678 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 SLC1A6P48664 564 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 MRPS5P82675 430 aaKnown RBP14.26□□□□□ -0.13
SDC1-202ENST00000381150 ROR1Q01973 937 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 HADHQ16836 314 aaKnown RBP14.26□□□□□ -0.13
SDC1-202ENST00000381150 UGT2A3Q6UWM9 527 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 ZBTB33Q86T24 672 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 NETO2Q8NC67 525 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 PIWIL2Q8TC59 973 aaKnown RBP14.26□□□□□ -0.13
SDC1-202ENST00000381150 NCSTNQ92542 709 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 MARK4Q96L34 752 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 CST3P01034 146 aaPredicted RBP14.26□□□□□ -0.13
SDC1-202ENST00000381150 KRT19P08727 400 aa14.26□□□□□ -0.13
SDC1-202ENST00000381150 TGFB3P10600 412 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms