RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 APBB2Q92870 758 aa22.27■■□□□ 1.16
TRIM54-202ENST00000380075 NT5C3BQ969T7 300 aa22.27■■□□□ 1.16
TRIM54-202ENST00000380075 SCLYQ96I15 445 aa22.27■■□□□ 1.16
TRIM54-202ENST00000380075 ADAM33Q9BZ11 813 aa22.27■■□□□ 1.16
TRIM54-202ENST00000380075 USP3Q9Y6I4 520 aa22.27■■□□□ 1.16
TRIM54-202ENST00000380075 SF3B1O75533 1304 aaKnown RBP eCLIP22.27■■□□□ 1.16
TRIM54-202ENST00000380075 SEPT7Q16181 437 aaKnown RBP22.27■■□□□ 1.15
TRIM54-202ENST00000380075 LRRC8DQ7L1W4 858 aa22.27■■□□□ 1.15
TRIM54-202ENST00000380075 BNIPLQ7Z465 357 aa22.27■■□□□ 1.15
TRIM54-202ENST00000380075 CCDC185Q8N715 623 aa22.27■■□□□ 1.15
TRIM54-202ENST00000380075 FAM149B1Q96BN6 582 aa22.27■■□□□ 1.15
TRIM54-202ENST00000380075 ETNK1Q9HBU6 452 aa22.27■■□□□ 1.15
TRIM54-202ENST00000380075 LRRC4Q9HBW1 653 aa22.27■■□□□ 1.15
TRIM54-202ENST00000380075 SLC40A1Q9NP59 571 aa22.27■■□□□ 1.15
TRIM54-202ENST00000380075 ABCF3Q9NUQ8 709 aa22.27■■□□□ 1.15
TRIM54-202ENST00000380075 CDY2AQ9Y6F7 541 aa22.27■■□□□ 1.15
TRIM54-202ENST00000380075 FAM155BO75949 473 aa22.26■■□□□ 1.15
TRIM54-202ENST00000380075 FBXO21O94952 628 aa22.26■■□□□ 1.15
TRIM54-202ENST00000380075 MT-ND3P03897 115 aa22.26■■□□□ 1.15
TRIM54-202ENST00000380075 APRTP07741 180 aa22.26■■□□□ 1.15
TRIM54-202ENST00000380075 LHX1P48742 406 aa22.26■■□□□ 1.15
TRIM54-202ENST00000380075 ATXN1P54253 815 aaKnown RBP22.26■■□□□ 1.15
TRIM54-202ENST00000380075 GBE1Q04446 702 aa22.26■■□□□ 1.15
TRIM54-202ENST00000380075 MGAT3Q09327 533 aa22.26■■□□□ 1.15
TRIM54-202ENST00000380075 CCDC15Q0P6D6 951 aa22.26■■□□□ 1.15
TRIM54-202ENST00000380075 GALNTL6Q49A17 601 aa22.26■■□□□ 1.15
TRIM54-202ENST00000380075 NCBP2-AS2Q69YL0 99 aa22.26■■□□□ 1.15
TRIM54-202ENST00000380075 HEATR6Q6AI08 1181 aaKnown RBP22.26■■□□□ 1.15
TRIM54-202ENST00000380075 CGB2Q6NT52 195 aa22.26■■□□□ 1.15
TRIM54-202ENST00000380075 BANPQ8N9N5 519 aa22.26■■□□□ 1.15
TRIM54-202ENST00000380075 TSPYL2Q9H2G4 693 aaPredicted RBP22.26■■□□□ 1.15
TRIM54-202ENST00000380075 RXFP1Q9HBX9 757 aa22.26■■□□□ 1.15
TRIM54-202ENST00000380075 XAB2Q9HCS7 855 aaKnown RBP22.26■■□□□ 1.15
TRIM54-202ENST00000380075 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.26■■□□□ 1.15
TRIM54-202ENST00000380075 ZNF180Q9UJW8 692 aa22.26■■□□□ 1.15
TRIM54-202ENST00000380075 NR2E3Q9Y5X4 410 aa22.26■■□□□ 1.15
TRIM54-202ENST00000380075 CFAP73A6NFT4 308 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 H3BRJ5 948 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 ATP2C2O75185 946 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 MAGEA3P43357 314 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 AIF1P55008 147 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 SARNPP82979 210 aaKnown RBP22.25■■□□□ 1.15
TRIM54-202ENST00000380075 SLC1A5Q15758 541 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 LVRNQ6Q4G3 990 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 KCNT2Q6UVM3 1135 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 CAND1Q86VP6 1230 aaKnown RBP22.25■■□□□ 1.15
TRIM54-202ENST00000380075 SIX6OS1Q8N1H7 587 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 CCDC110Q8TBZ0 833 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 TFB1MQ8WVM0 346 aaKnown RBP22.25■■□□□ 1.15
TRIM54-202ENST00000380075 OLFM3Q96PB7 478 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 SLC2A13Q96QE2 648 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 NPY6RQ99463 290 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 FERMT1Q9BQL6 677 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 POPDC2Q9HBU9 364 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 FAM105AQ9NUU6 356 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 DTLQ9NZJ0 730 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 ZC3H7BQ9UGR2 993 aaKnown RBP22.25■■□□□ 1.15
TRIM54-202ENST00000380075 DGKIO75912 1065 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 FAM200BP0CF97 657 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 ALADP13716 330 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 PRKCHP24723 683 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 HNRNPH1P31943 449 aaKnown RBP22.25■■□□□ 1.15
TRIM54-202ENST00000380075 FDFT1P37268 417 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 CDK16Q00536 496 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 SLC10A2Q12908 348 aaPredicted RBP22.25■■□□□ 1.15
TRIM54-202ENST00000380075 SEMA5AQ13591 1074 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 MBTPS1Q14703 1052 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 KBTBD12Q3ZCT8 623 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 FAM26DQ5JW98 314 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 WSCD1Q658N2 575 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 SLC26A11Q86WA9 606 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 PHTF1Q9UMS5 762 aa22.25■■□□□ 1.15
TRIM54-202ENST00000380075 EDF1O60869 148 aaKnown RBP22.24■■□□□ 1.15
TRIM54-202ENST00000380075 GPNMBQ14956 572 aa22.24■■□□□ 1.15
TRIM54-202ENST00000380075 LGSNQ5TDP6 509 aa22.24■■□□□ 1.15
TRIM54-202ENST00000380075 CLEC20AQ6ZU45 233 aa22.24■■□□□ 1.15
TRIM54-202ENST00000380075 PAQR9Q6ZVX9 377 aa22.24■■□□□ 1.15
TRIM54-202ENST00000380075 BADQ92934 168 aa22.24■■□□□ 1.15
TRIM54-202ENST00000380075 SLC9A7Q96T83 725 aa22.24■■□□□ 1.15
TRIM54-202ENST00000380075 VPS11Q9H270 941 aa22.24■■□□□ 1.15
TRIM54-202ENST00000380075 TTLL3Q9Y4R7 772 aa22.24■■□□□ 1.15
TRIM54-202ENST00000380075 THP07101 528 aa22.23■■□□□ 1.15
TRIM54-202ENST00000380075 MLLT1Q03111 559 aaPredicted RBP22.23■■□□□ 1.15
TRIM54-202ENST00000380075 SLC18A2Q05940 514 aa22.23■■□□□ 1.15
TRIM54-202ENST00000380075 DNAJC3Q13217 504 aa22.23■■□□□ 1.15
TRIM54-202ENST00000380075 DCAF6Q58WW2 860 aa22.23■■□□□ 1.15
TRIM54-202ENST00000380075 FAM131BQ86XD5 332 aa22.23■■□□□ 1.15
TRIM54-202ENST00000380075 SUGP1Q8IWZ8 645 aaKnown RBP22.23■■□□□ 1.15
TRIM54-202ENST00000380075 SENP8Q96LD8 212 aa22.23■■□□□ 1.15
TRIM54-202ENST00000380075 MED10Q9BTT4 135 aa22.23■■□□□ 1.15
TRIM54-202ENST00000380075 DDX43Q9NXZ2 648 aaKnown RBP22.23■■□□□ 1.15
TRIM54-202ENST00000380075 GIT1Q9Y2X7 761 aa22.23■■□□□ 1.15
TRIM54-202ENST00000380075 STK10O94804 968 aaKnown RBP22.23■■□□□ 1.15
TRIM54-202ENST00000380075 UBOX5O94941 541 aa22.23■■□□□ 1.15
TRIM54-202ENST00000380075 GOT1P17174 413 aa22.23■■□□□ 1.15
TRIM54-202ENST00000380075 AMPD1P23109 780 aa22.23■■□□□ 1.15
TRIM54-202ENST00000380075 SF3A3Q12874 501 aaKnown RBP eCLIP22.23■■□□□ 1.15
TRIM54-202ENST00000380075 MTM1Q13496 603 aa22.23■■□□□ 1.15
TRIM54-202ENST00000380075 TTC39BQ5VTQ0 682 aaPredicted RBP22.23■■□□□ 1.15
TRIM54-202ENST00000380075 LRRC6Q86X45 466 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms