RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 NFE2Q16621 373 aaPredicted RBP18.61■□□□□ 0.57
HLA-DQB1-201ENST00000374943 HEATR6Q6AI08 1181 aaKnown RBP18.61■□□□□ 0.57
HLA-DQB1-201ENST00000374943 ABI1Q8IZP0 508 aa18.61■□□□□ 0.57
HLA-DQB1-201ENST00000374943 MCUQ8NE86 351 aa18.61■□□□□ 0.57
HLA-DQB1-201ENST00000374943 ADAM32Q8TC27 787 aa18.61■□□□□ 0.57
HLA-DQB1-201ENST00000374943 ARHGEF2Q92974 986 aaKnown RBP18.61■□□□□ 0.57
HLA-DQB1-201ENST00000374943 CASD1Q96PB1 797 aa18.61■□□□□ 0.57
HLA-DQB1-201ENST00000374943 VPS37BQ9H9H4 285 aa18.61■□□□□ 0.57
HLA-DQB1-201ENST00000374943 ANLNQ9NQW6 1124 aa18.61■□□□□ 0.57
HLA-DQB1-201ENST00000374943 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.61■□□□□ 0.57
HLA-DQB1-201ENST00000374943 CTNNAL1Q9UBT7 734 aa18.61■□□□□ 0.57
HLA-DQB1-201ENST00000374943 SLC24A2Q9UI40 661 aa18.61■□□□□ 0.57
HLA-DQB1-201ENST00000374943 PRG3Q9Y2Y8 225 aaPredicted RBP18.61■□□□□ 0.57
HLA-DQB1-201ENST00000374943 MFHAS1Q9Y4C4 1052 aa18.61■□□□□ 0.57
HLA-DQB1-201ENST00000374943 ACTL7BQ9Y614 415 aa18.61■□□□□ 0.57
HLA-DQB1-201ENST00000374943 I6L893 689 aaPredicted RBP18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 HOXA2O43364 376 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 TPSB2P20231 275 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 GCAP28676 217 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 GLUD2P49448 558 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 SLC5A3P53794 718 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 MRPL58Q14197 206 aaKnown RBP18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 PDK1Q15118 436 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 TPSAB1Q15661 275 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 CCDC38Q502W7 563 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 VSTM1Q6UX27 236 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 TAC4Q86UU9 113 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 TAB3Q8N5C8 712 aaPredicted RBP18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 BCAS4Q8TDM0 211 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 DQX1Q8TE96 717 aaKnown RBP18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 HTR3CQ8WXA8 447 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 EDEM1Q92611 657 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 ADAM28Q9UKQ2 775 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 BRCA2P51587 3418 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 SHROOM3Q8TF72 1996 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 CREB3O43889 395 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 TADA2AO75478 443 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 BANF1O75531 89 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 VAV1P15498 845 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 CYP2C18P33260 490 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 NR1H3Q13133 447 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 SLC39A12Q504Y0 691 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 VARS2Q5ST30 1063 aaKnown RBP18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 PDZD4Q76G19 769 aaPredicted RBP18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 TADA2BQ86TJ2 420 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 ANKMY2Q8IV38 441 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 VPS52Q8N1B4 723 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 CRIPAKQ8N1N5 446 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 FBXO36Q8NEA4 188 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 CCDC110Q8TBZ0 833 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 SELENOSQ9BQE4 189 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 ABCC13Q9NSE7 274 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 TMEM51Q9NW97 253 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 TEX264Q9Y6I9 313 aa18.6■□□□□ 0.57
HLA-DQB1-201ENST00000374943 NUP205Q92621 2012 aa18.59■□□□□ 0.57
HLA-DQB1-201ENST00000374943 A0A0A0MRY4 1105 aa18.59■□□□□ 0.57
HLA-DQB1-201ENST00000374943 PPP1R12AO14974 1030 aaPredicted RBP18.59■□□□□ 0.57
HLA-DQB1-201ENST00000374943 SPAG6O75602 509 aa18.59■□□□□ 0.57
HLA-DQB1-201ENST00000374943 PARNO95453 639 aaKnown RBP18.59■□□□□ 0.57
HLA-DQB1-201ENST00000374943 CHN1P15882 459 aa18.59■□□□□ 0.57
HLA-DQB1-201ENST00000374943 GRIK1P39086 918 aa18.59■□□□□ 0.57
HLA-DQB1-201ENST00000374943 MAGEA11P43364 429 aa18.59■□□□□ 0.57
HLA-DQB1-201ENST00000374943 TPI1P60174 286 aa18.59■□□□□ 0.57
HLA-DQB1-201ENST00000374943 YWHAGP61981 247 aaKnown RBP eCLIP18.59■□□□□ 0.57
HLA-DQB1-201ENST00000374943 SEMA5AQ13591 1074 aa18.59■□□□□ 0.57
HLA-DQB1-201ENST00000374943 BBS9Q3SYG4 887 aa18.59■□□□□ 0.57
HLA-DQB1-201ENST00000374943 HP1BP3Q5SSJ5 553 aaPredicted RBP18.59■□□□□ 0.57
HLA-DQB1-201ENST00000374943 SCAMP5Q8TAC9 235 aa18.59■□□□□ 0.57
HLA-DQB1-201ENST00000374943 MAML1Q92585 1016 aa18.59■□□□□ 0.57
HLA-DQB1-201ENST00000374943 C8orf48Q96LL4 319 aa18.59■□□□□ 0.57
HLA-DQB1-201ENST00000374943 SPATA13Q96N96 652 aa18.59■□□□□ 0.57
HLA-DQB1-201ENST00000374943 MRPL9Q9BYD2 267 aaKnown RBP18.59■□□□□ 0.57
HLA-DQB1-201ENST00000374943 ACSS3Q9H6R3 686 aa18.59■□□□□ 0.57
HLA-DQB1-201ENST00000374943 WDCPQ9H6R7 721 aa18.59■□□□□ 0.57
HLA-DQB1-201ENST00000374943 ETNK1Q9HBU6 452 aa18.59■□□□□ 0.57
HLA-DQB1-201ENST00000374943 OR6C75A6NL08 312 aa18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 FAM72CH0Y354 149 aa18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 TRIM66O15016 1216 aa18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 CXCL10P02778 98 aa18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 OR4Q2P0C623 313 aa18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 BRMS1LQ5PSV4 323 aa18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 FAM72AQ5TYM5 149 aa18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 FAM72DQ6L9T8 149 aa18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 FAM72BQ86X60 149 aa18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 NPAS4Q8IUM7 802 aa18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 CYP4X1Q8N118 509 aa18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 MDM1Q8TC05 714 aa18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 ATXN2LQ8WWM7 1075 aaKnown RBP18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 DEFB118Q96PH6 123 aa18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 XPO6Q96QU8 1125 aaKnown RBP18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 EPAS1Q99814 870 aa18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 FERMT1Q9BQL6 677 aa18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 TMEM175Q9BSA9 504 aa18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 OSBPL2Q9H1P3 480 aa18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 SMOC2Q9H3U7 446 aa18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 CCDC134Q9H6E4 229 aa18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 MARCH5Q9NX47 278 aa18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 RABGEF1Q9UJ41 708 aa18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 LRFN2Q9ULH4 789 aa18.58■□□□□ 0.57
HLA-DQB1-201ENST00000374943 NCAM2O15394 837 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms