RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 TICRRQ7Z2Z1 1910 aa19.91■□□□□ 0.78
HLA-DRB1-201ENST00000360004 NCAM2O15394 837 aa19.9■□□□□ 0.78
HLA-DRB1-201ENST00000360004 GREM1O60565 184 aa19.9■□□□□ 0.78
HLA-DRB1-201ENST00000360004 IPO7O95373 1038 aaKnown RBP19.9■□□□□ 0.78
HLA-DRB1-201ENST00000360004 PDGFBP01127 241 aaPredicted RBP19.9■□□□□ 0.78
HLA-DRB1-201ENST00000360004 IGLV3-27P01718 113 aa19.9■□□□□ 0.78
HLA-DRB1-201ENST00000360004 RFC1P35251 1148 aaPredicted RBP19.9■□□□□ 0.78
HLA-DRB1-201ENST00000360004 STARD6P59095 220 aa19.9■□□□□ 0.78
HLA-DRB1-201ENST00000360004 MTA1Q13330 715 aa19.9■□□□□ 0.78
HLA-DRB1-201ENST00000360004 PON2Q15165 354 aa19.9■□□□□ 0.78
HLA-DRB1-201ENST00000360004 ADGRF1Q5T601 910 aa19.9■□□□□ 0.78
HLA-DRB1-201ENST00000360004 RHBDF2Q6PJF5 856 aa19.9■□□□□ 0.78
HLA-DRB1-201ENST00000360004 CHSY1Q86X52 802 aa19.9■□□□□ 0.78
HLA-DRB1-201ENST00000360004 TMEM25Q86YD3 366 aa19.9■□□□□ 0.78
HLA-DRB1-201ENST00000360004 CCDC117Q8IWD4 279 aaPredicted RBP19.9■□□□□ 0.78
HLA-DRB1-201ENST00000360004 CTNNBL1Q8WYA6 563 aaPredicted RBP19.9■□□□□ 0.78
HLA-DRB1-201ENST00000360004 BTN2A3PQ96KV6 586 aa19.9■□□□□ 0.78
HLA-DRB1-201ENST00000360004 PANX2Q96RD6 677 aa19.9■□□□□ 0.78
HLA-DRB1-201ENST00000360004 P2RY13Q9BPV8 354 aa19.9■□□□□ 0.78
HLA-DRB1-201ENST00000360004 OTOL1A6NHN0 477 aaPredicted RBP19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 C2CD4BA6NLJ0 364 aa19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 FAM170BA6NMN3 283 aa19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 TRDMT1O14717 391 aaKnown RBP19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 IGLV3-25P01717 112 aa19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 VCANP13611 3396 aa19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 CYLC1P35663 651 aaPredicted RBP19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 GRSF1Q12849 480 aaKnown RBP eCLIP19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 MAMLD1Q13495 774 aa19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 PPP2R5DQ14738 602 aa19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 C15orf59Q2T9L4 293 aaPredicted RBP19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 ARL13BQ3SXY8 428 aa19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 PREPLQ4J6C6 727 aaPredicted RBP19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 MPPE1Q53F39 396 aa19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 BRMS1LQ5PSV4 323 aa19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 CPXM2Q8N436 756 aa19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 NAT16Q8N8M0 369 aa19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 CD101Q93033 1021 aa19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 SLC39A13Q96H72 371 aa19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 FOXQ1Q9C009 403 aa19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 LTB4R2Q9NPC1 389 aa19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 LUC7LQ9NQ29 371 aaKnown RBP19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 PIGVQ9NUD9 493 aa19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 SPTLC3Q9NUV7 552 aa19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 SIT1Q9Y3P8 196 aa19.89■□□□□ 0.77
HLA-DRB1-201ENST00000360004 KCNU1A8MYU2 1149 aa19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 F5H5T6 163 aa19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 H2AFZP0C0S5 128 aa19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 TYRP14679 529 aa19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 TFE3P19532 575 aaPredicted RBP19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 PSMA2P25787 234 aa19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 PTPN9P43378 593 aa19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 GALCP54803 685 aa19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 KDSRQ06136 332 aa19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 LRRC32Q14392 662 aa19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 SPA17Q15506 151 aa19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 CCDC14Q49A88 953 aa19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 RAP1GAP2Q684P5 730 aa19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 PLEKHA7Q6IQ23 1121 aa19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 SCYL2Q6P3W7 929 aa19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 NUDT18Q6ZVK8 323 aa19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 H2AFVQ71UI9 128 aa19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 FBXL6Q8N531 539 aa19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 FAM172AQ8WUF8 416 aa19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 AZIN2Q96A70 460 aa19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 TMA16Q96EY4 203 aaKnown RBP19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 TKTL2Q9H0I9 626 aa19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 THAP2Q9H0W7 228 aa19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 DNAJC17Q9NVM6 304 aaKnown RBP19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 PLK2Q9NYY3 685 aa19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 DEC1Q9P2X7 70 aa19.88■□□□□ 0.77
HLA-DRB1-201ENST00000360004 GOLGA6L7A0A1B0GV03 622 aa19.87■□□□□ 0.77
HLA-DRB1-201ENST00000360004 PRR33A8MZF0 331 aa19.87■□□□□ 0.77
HLA-DRB1-201ENST00000360004 HOXC11O43248 304 aaPredicted RBP19.87■□□□□ 0.77
HLA-DRB1-201ENST00000360004 GPR37L1O60883 481 aa19.87■□□□□ 0.77
HLA-DRB1-201ENST00000360004 CXCR3P49682 368 aa19.87■□□□□ 0.77
HLA-DRB1-201ENST00000360004 ZNF143P52747 638 aaPredicted RBP19.87■□□□□ 0.77
HLA-DRB1-201ENST00000360004 RPL7AP62424 266 aaKnown RBP19.87■□□□□ 0.77
HLA-DRB1-201ENST00000360004 ASTLQ6HA08 431 aaPredicted RBP19.87■□□□□ 0.77
HLA-DRB1-201ENST00000360004 TRNP1Q6NT89 227 aa19.87■□□□□ 0.77
HLA-DRB1-201ENST00000360004 RFWD3Q6PCD5 774 aa19.87■□□□□ 0.77
HLA-DRB1-201ENST00000360004 TXNDC11Q6PKC3 985 aa19.87■□□□□ 0.77
HLA-DRB1-201ENST00000360004 STRADAQ7RTN6 431 aa19.87■□□□□ 0.77
HLA-DRB1-201ENST00000360004 FAM131BQ86XD5 332 aa19.87■□□□□ 0.77
HLA-DRB1-201ENST00000360004 TMTC1Q8IUR5 882 aa19.87■□□□□ 0.77
HLA-DRB1-201ENST00000360004 LGI2Q8N0V4 545 aa19.87■□□□□ 0.77
HLA-DRB1-201ENST00000360004 PGAP3Q96FM1 320 aaPredicted RBP19.87■□□□□ 0.77
HLA-DRB1-201ENST00000360004 PNKPQ96T60 521 aa19.87■□□□□ 0.77
HLA-DRB1-201ENST00000360004 CNPY3Q9BT09 278 aa19.87■□□□□ 0.77
HLA-DRB1-201ENST00000360004 SIK2Q9H0K1 926 aa19.87■□□□□ 0.77
HLA-DRB1-201ENST00000360004 STIM2Q9P246 746 aa19.87■□□□□ 0.77
HLA-DRB1-201ENST00000360004 CTTNBP2NLQ9P2B4 639 aa19.87■□□□□ 0.77
HLA-DRB1-201ENST00000360004 KIF26AQ9ULI4 1882 aaPredicted RBP19.87■□□□□ 0.77
HLA-DRB1-201ENST00000360004 CCP110O43303 1012 aa19.86■□□□□ 0.77
HLA-DRB1-201ENST00000360004 RNF8O76064 485 aa19.86■□□□□ 0.77
HLA-DRB1-201ENST00000360004 APODP05090 189 aa19.86■□□□□ 0.77
HLA-DRB1-201ENST00000360004 TACR2P21452 398 aa19.86■□□□□ 0.77
HLA-DRB1-201ENST00000360004 GALK1P51570 392 aa19.86■□□□□ 0.77
HLA-DRB1-201ENST00000360004 GSDMDP57764 484 aa19.86■□□□□ 0.77
HLA-DRB1-201ENST00000360004 RABGAP1LQ5R372 815 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms