RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 GOT1P17174 413 aa18.81■□□□□ 0.6
SMARCD3-202ENST00000356800 TNFRSF8P28908 595 aa18.81■□□□□ 0.6
SMARCD3-202ENST00000356800 CLCN6P51797 869 aa18.81■□□□□ 0.6
SMARCD3-202ENST00000356800 DYNLT1P63172 113 aa18.81■□□□□ 0.6
SMARCD3-202ENST00000356800 PPP2R5DQ14738 602 aa18.81■□□□□ 0.6
SMARCD3-202ENST00000356800 KCTD19Q17RG1 926 aaPredicted RBP18.81■□□□□ 0.6
SMARCD3-202ENST00000356800 BRMS1LQ5PSV4 323 aa18.81■□□□□ 0.6
SMARCD3-202ENST00000356800 MIB1Q86YT6 1006 aa18.81■□□□□ 0.6
SMARCD3-202ENST00000356800 TMC8Q8IU68 726 aa18.81■□□□□ 0.6
SMARCD3-202ENST00000356800 HS6ST3Q8IZP7 471 aa18.81■□□□□ 0.6
SMARCD3-202ENST00000356800 CSPG4P5Q96PW8 444 aa18.81■□□□□ 0.6
SMARCD3-202ENST00000356800 GDF3Q9NR23 364 aa18.81■□□□□ 0.6
SMARCD3-202ENST00000356800 MAN1C1Q9NR34 630 aa18.81■□□□□ 0.6
SMARCD3-202ENST00000356800 RASAL2Q9UJF2 1139 aa18.81■□□□□ 0.6
SMARCD3-202ENST00000356800 PDE4DIPQ5VU43 2346 aa18.81■□□□□ 0.6
SMARCD3-202ENST00000356800 BHMG1C9JSJ3 638 aaPredicted RBP18.8■□□□□ 0.6
SMARCD3-202ENST00000356800 C1RP00736 705 aa18.8■□□□□ 0.6
SMARCD3-202ENST00000356800 CCR1P32246 355 aa18.8■□□□□ 0.6
SMARCD3-202ENST00000356800 NNTQ13423 1086 aa18.8■□□□□ 0.6
SMARCD3-202ENST00000356800 TRIP4Q15650 581 aaPredicted RBP18.8■□□□□ 0.6
SMARCD3-202ENST00000356800 ARL13BQ3SXY8 428 aa18.8■□□□□ 0.6
SMARCD3-202ENST00000356800 CCNI2Q6ZMN8 369 aaPredicted RBP18.8■□□□□ 0.6
SMARCD3-202ENST00000356800 IFT20Q8IY31 132 aa18.8■□□□□ 0.6
SMARCD3-202ENST00000356800 HAUS1Q96CS2 278 aa18.8■□□□□ 0.6
SMARCD3-202ENST00000356800 SLC28A3Q9HAS3 691 aa18.8■□□□□ 0.6
SMARCD3-202ENST00000356800 SAE1Q9UBE0 346 aaPredicted RBP18.8■□□□□ 0.6
SMARCD3-202ENST00000356800 UXTQ9UBK9 157 aaPredicted RBP18.8■□□□□ 0.6
SMARCD3-202ENST00000356800 CDH23Q9H251 3354 aa18.8■□□□□ 0.6
SMARCD3-202ENST00000356800 NOTCH4Q99466 2003 aa18.8■□□□□ 0.6
SMARCD3-202ENST00000356800 MYO9BQ13459 2157 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 C2orf78A6NCI8 922 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 FAM187AA6NFU0 413 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 NRG2O14511 850 aaPredicted RBP18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 CCL16O15467 120 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 COCHO43405 550 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 ERLIN1O75477 346 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 IGLV3-27P01718 113 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 COILP38432 576 aaPredicted RBP18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 TBX4P57082 545 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 DR1Q01658 176 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 SNX1Q13596 522 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 CCNG2Q16589 344 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 PPM1LQ5SGD2 360 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 HECTD3Q5T447 861 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 ARTNQ5T4W7 220 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 CCDC137Q6PK04 289 aaKnown RBP18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 SLCO2A1Q92959 643 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 PLEKHA4Q9H4M7 779 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 RCOR3Q9P2K3 495 aaPredicted RBP18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 XPO7Q9UIA9 1087 aaKnown RBP18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 SLC12A8A0AV02 714 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 PAGE1O75459 146 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 RFPL2O75678 378 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 ZMYND10O75800 440 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 OAS1P00973 400 aaKnown RBP18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 PECAM1P16284 738 aaPredicted RBP18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 GGCXP38435 758 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 PTGIRP43119 386 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 KCNJ1P48048 391 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 PPP3CCP48454 512 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 TUBP50607 506 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 GUCY2DQ02846 1103 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 SLC9A4Q6AI14 798 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 KLHDC10Q6PID8 442 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 NPNTQ6UXI9 565 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 GAREM2Q75VX8 874 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 RBM23Q86U06 439 aaKnown RBP18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 PLD5Q8N7P1 536 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 EIF1ADQ8N9N8 165 aaKnown RBP18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 SEC14L1Q92503 715 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 CDK5RAP1Q96SZ6 601 aaKnown RBP18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 MAK16Q9BXY0 300 aaKnown RBP18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 RNF38Q9H0F5 515 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 OSBPL2Q9H1P3 480 aa18.79■□□□□ 0.6
SMARCD3-202ENST00000356800 RFXAPO00287 272 aa18.78■□□□□ 0.6
SMARCD3-202ENST00000356800 TTI1O43156 1089 aa18.78■□□□□ 0.6
SMARCD3-202ENST00000356800 CREB3O43889 395 aa18.78■□□□□ 0.6
SMARCD3-202ENST00000356800 AMPD1P23109 780 aa18.78■□□□□ 0.6
SMARCD3-202ENST00000356800 ATP5C1P36542 298 aaKnown RBP18.78■□□□□ 0.6
SMARCD3-202ENST00000356800 ARL4AP40617 200 aa18.78■□□□□ 0.6
SMARCD3-202ENST00000356800 DPYSQ14117 519 aa18.78■□□□□ 0.6
SMARCD3-202ENST00000356800 TFDP2Q14188 446 aa18.78■□□□□ 0.6
SMARCD3-202ENST00000356800 DRICH1Q6PGQ1 229 aaPredicted RBP18.78■□□□□ 0.6
SMARCD3-202ENST00000356800 HAPLN3Q96S86 360 aa18.78■□□□□ 0.6
SMARCD3-202ENST00000356800 HINFPQ9BQA5 517 aa18.78■□□□□ 0.6
SMARCD3-202ENST00000356800 LMAN2LQ9H0V9 348 aa18.78■□□□□ 0.6
SMARCD3-202ENST00000356800 PRO3102Q9H379 93 aa18.78■□□□□ 0.6
SMARCD3-202ENST00000356800 EPB41L5Q9HCM4 733 aa18.78■□□□□ 0.6
SMARCD3-202ENST00000356800 ARFGAP3Q9NP61 516 aa18.78■□□□□ 0.6
SMARCD3-202ENST00000356800 ARHGEF4Q9NR80 690 aa18.78■□□□□ 0.6
SMARCD3-202ENST00000356800 ETNK2Q9NVF9 386 aa18.78■□□□□ 0.6
SMARCD3-202ENST00000356800 TMEM51Q9NW97 253 aa18.78■□□□□ 0.6
SMARCD3-202ENST00000356800 OR12D3Q9UGF7 316 aa18.78■□□□□ 0.6
SMARCD3-202ENST00000356800 FEZ2Q9UHY8 353 aaPredicted RBP18.78■□□□□ 0.6
SMARCD3-202ENST00000356800 DNMT3LQ9UJW3 386 aa18.78■□□□□ 0.6
SMARCD3-202ENST00000356800 MFHAS1Q9Y4C4 1052 aa18.78■□□□□ 0.6
SMARCD3-202ENST00000356800 HCFC2Q9Y5Z7 792 aa18.78■□□□□ 0.6
SMARCD3-202ENST00000356800 H3BRJ5 948 aa18.77■□□□□ 0.6
SMARCD3-202ENST00000356800 APOC4-APOC2K7ER74 178 aa18.77■□□□□ 0.6
SMARCD3-202ENST00000356800 APOL1O14791 398 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms