RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 UBA3Q8TBC4 463 aa16.59■□□□□ 0.25
PDGFA-201ENST00000354513 DNASE2BQ8WZ79 361 aa16.59■□□□□ 0.25
PDGFA-201ENST00000354513 SLC32A1Q9H598 525 aa16.59■□□□□ 0.25
PDGFA-201ENST00000354513 ELOVL2Q9NXB9 296 aa16.59■□□□□ 0.25
PDGFA-201ENST00000354513 SFMBT1Q9UHJ3 866 aa16.59■□□□□ 0.25
PDGFA-201ENST00000354513 STOML2Q9UJZ1 356 aa16.59■□□□□ 0.25
PDGFA-201ENST00000354513 NEUROG3Q9Y4Z2 214 aa16.59■□□□□ 0.25
PDGFA-201ENST00000354513 SLCO1B1Q9Y6L6 691 aa16.59■□□□□ 0.25
PDGFA-201ENST00000354513 FREM2Q5SZK8 3169 aa16.59■□□□□ 0.25
PDGFA-201ENST00000354513 NPC1O15118 1278 aa16.58■□□□□ 0.24
PDGFA-201ENST00000354513 MSI1O43347 362 aaKnown RBP16.58■□□□□ 0.24
PDGFA-201ENST00000354513 STX10O60499 249 aa16.58■□□□□ 0.24
PDGFA-201ENST00000354513 HLA-FP30511 346 aa16.58■□□□□ 0.24
PDGFA-201ENST00000354513 TPMTP51580 245 aa16.58■□□□□ 0.24
PDGFA-201ENST00000354513 DAOAP59103 153 aa16.58■□□□□ 0.24
PDGFA-201ENST00000354513 BST2Q10589 180 aaKnown RBP16.58■□□□□ 0.24
PDGFA-201ENST00000354513 PLEKHG6Q3KR16 790 aa16.58■□□□□ 0.24
PDGFA-201ENST00000354513 TCERG1LQ5VWI1 586 aa16.58■□□□□ 0.24
PDGFA-201ENST00000354513 RSRC2Q7L4I2 434 aaKnown RBP16.58■□□□□ 0.24
PDGFA-201ENST00000354513 RABEPKQ7Z6M1 372 aa16.58■□□□□ 0.24
PDGFA-201ENST00000354513 KIAA0907Q7Z7F0 614 aaPredicted RBP16.58■□□□□ 0.24
PDGFA-201ENST00000354513 CACUL1Q86Y37 369 aa16.58■□□□□ 0.24
PDGFA-201ENST00000354513 HDDC3Q8N4P3 179 aa16.58■□□□□ 0.24
PDGFA-201ENST00000354513 WFDC5Q8TCV5 224 aa16.58■□□□□ 0.24
PDGFA-201ENST00000354513 TFAP2BQ92481 460 aa16.58■□□□□ 0.24
PDGFA-201ENST00000354513 EDEM1Q92611 657 aa16.58■□□□□ 0.24
PDGFA-201ENST00000354513 GPR174Q9BXC1 333 aa16.58■□□□□ 0.24
PDGFA-201ENST00000354513 SLC2A11Q9BYW1 496 aa16.58■□□□□ 0.24
PDGFA-201ENST00000354513 STRIP2Q9ULQ0 834 aa16.58■□□□□ 0.24
PDGFA-201ENST00000354513 RNF225M0QZC1 329 aaPredicted RBP16.57■□□□□ 0.24
PDGFA-201ENST00000354513 TSPAN3O60637 253 aa16.57■□□□□ 0.24
PDGFA-201ENST00000354513 NDUFS2O75306 463 aa16.57■□□□□ 0.24
PDGFA-201ENST00000354513 CALCAP01258 141 aa16.57■□□□□ 0.24
PDGFA-201ENST00000354513 IGLV3-27P01718 113 aa16.57■□□□□ 0.24
PDGFA-201ENST00000354513 HLA-EP13747 358 aa16.57■□□□□ 0.24
PDGFA-201ENST00000354513 ZNF132P52740 706 aa16.57■□□□□ 0.24
PDGFA-201ENST00000354513 ATXN3P54252 364 aaPredicted RBP16.57■□□□□ 0.24
PDGFA-201ENST00000354513 STARD3Q14849 445 aa16.57■□□□□ 0.24
PDGFA-201ENST00000354513 EIF4HQ15056 248 aaKnown RBP16.57■□□□□ 0.24
PDGFA-201ENST00000354513 SGO2Q562F6 1265 aa16.57■□□□□ 0.24
PDGFA-201ENST00000354513 BSPRYQ5W0U4 402 aa16.57■□□□□ 0.24
PDGFA-201ENST00000354513 MSANTD2Q6P1R3 559 aa16.57■□□□□ 0.24
PDGFA-201ENST00000354513 TMPRSS6Q8IU80 811 aa16.57■□□□□ 0.24
PDGFA-201ENST00000354513 RGL4Q8IZJ4 473 aa16.57■□□□□ 0.24
PDGFA-201ENST00000354513 ZCCHC9Q8N567 271 aaKnown RBP16.57■□□□□ 0.24
PDGFA-201ENST00000354513 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.57■□□□□ 0.24
PDGFA-201ENST00000354513 C1orf216Q8TAB5 229 aa16.57■□□□□ 0.24
PDGFA-201ENST00000354513 DDI1Q8WTU0 396 aa16.57■□□□□ 0.24
PDGFA-201ENST00000354513 KCTD13Q8WZ19 329 aa16.57■□□□□ 0.24
PDGFA-201ENST00000354513 KAT5Q92993 513 aa16.57■□□□□ 0.24
PDGFA-201ENST00000354513 DNAI2Q9GZS0 605 aa16.57■□□□□ 0.24
PDGFA-201ENST00000354513 HBS1LQ9Y450 684 aaKnown RBP16.57■□□□□ 0.24
PDGFA-201ENST00000354513 NBEAQ8NFP9 2946 aa16.57■□□□□ 0.24
PDGFA-201ENST00000354513 ZBTB24O43167 697 aaPredicted RBP16.56■□□□□ 0.24
PDGFA-201ENST00000354513 SH3BP5O60239 455 aa16.56■□□□□ 0.24
PDGFA-201ENST00000354513 CAPNS1P04632 268 aa16.56■□□□□ 0.24
PDGFA-201ENST00000354513 SYPP08247 313 aa16.56■□□□□ 0.24
PDGFA-201ENST00000354513 CD44P16070 742 aaKnown RBP16.56■□□□□ 0.24
PDGFA-201ENST00000354513 LRMPQ12912 555 aa16.56■□□□□ 0.24
PDGFA-201ENST00000354513 CAMK2GQ13555 558 aaPredicted RBP16.56■□□□□ 0.24
PDGFA-201ENST00000354513 PTPRNQ16849 979 aa16.56■□□□□ 0.24
PDGFA-201ENST00000354513 DCAF12L1Q5VU92 463 aa16.56■□□□□ 0.24
PDGFA-201ENST00000354513 RAB44Q7Z6P3 723 aaPredicted RBP16.56■□□□□ 0.24
PDGFA-201ENST00000354513 ADIPOR2Q86V24 386 aa16.56■□□□□ 0.24
PDGFA-201ENST00000354513 SCML4Q8N228 414 aa16.56■□□□□ 0.24
PDGFA-201ENST00000354513 ZNF366Q8N895 744 aa16.56■□□□□ 0.24
PDGFA-201ENST00000354513 CLEC4CQ8WTT0 213 aa16.56■□□□□ 0.24
PDGFA-201ENST00000354513 CYB5D2Q8WUJ1 264 aa16.56■□□□□ 0.24
PDGFA-201ENST00000354513 FOXJ1Q92949 421 aa16.56■□□□□ 0.24
PDGFA-201ENST00000354513 SIPA1Q96FS4 1042 aa16.56■□□□□ 0.24
PDGFA-201ENST00000354513 CIPCQ9C0C6 399 aa16.56■□□□□ 0.24
PDGFA-201ENST00000354513 TMEM245Q9H330 911 aa16.56■□□□□ 0.24
PDGFA-201ENST00000354513 IL21RQ9HBE5 538 aa16.56■□□□□ 0.24
PDGFA-201ENST00000354513 LRRC4Q9HBW1 653 aa16.56■□□□□ 0.24
PDGFA-201ENST00000354513 OLA1Q9NTK5 396 aaKnown RBP16.56■□□□□ 0.24
PDGFA-201ENST00000354513 SUSD2Q9UGT4 822 aa16.56■□□□□ 0.24
PDGFA-201ENST00000354513 MSRB2Q9Y3D2 182 aa16.56■□□□□ 0.24
PDGFA-201ENST00000354513 NFE2L3Q9Y4A8 694 aa16.56■□□□□ 0.24
PDGFA-201ENST00000354513 ITPR1Q14643 2758 aa16.56■□□□□ 0.24
PDGFA-201ENST00000354513 FAM221BA6H8Z2 402 aa16.55■□□□□ 0.24
PDGFA-201ENST00000354513 MEI4A8MW99 385 aa16.55■□□□□ 0.24
PDGFA-201ENST00000354513 PIK3R2O00459 728 aa16.55■□□□□ 0.24
PDGFA-201ENST00000354513 CYBBP04839 570 aa16.55■□□□□ 0.24
PDGFA-201ENST00000354513 SETSIPP0DME0 302 aa16.55■□□□□ 0.24
PDGFA-201ENST00000354513 VDRP11473 427 aa16.55■□□□□ 0.24
PDGFA-201ENST00000354513 CD19P15391 556 aa16.55■□□□□ 0.24
PDGFA-201ENST00000354513 SLC6A4P31645 630 aa16.55■□□□□ 0.24
PDGFA-201ENST00000354513 NUCB2P80303 420 aa16.55■□□□□ 0.24
PDGFA-201ENST00000354513 FKBP3Q00688 224 aaKnown RBP16.55■□□□□ 0.24
PDGFA-201ENST00000354513 MPPE1Q53F39 396 aa16.55■□□□□ 0.24
PDGFA-201ENST00000354513 FAM133BQ5BKY9 247 aaKnown RBP16.55■□□□□ 0.24
PDGFA-201ENST00000354513 WDR45BQ5MNZ6 344 aa16.55■□□□□ 0.24
PDGFA-201ENST00000354513 PMF1Q6P1K2 205 aa16.55■□□□□ 0.24
PDGFA-201ENST00000354513 NAXDQ8IW45 347 aa16.55■□□□□ 0.24
PDGFA-201ENST00000354513 CHCHD4Q8N4Q1 142 aa16.55■□□□□ 0.24
PDGFA-201ENST00000354513 CADM4Q8NFZ8 388 aa16.55■□□□□ 0.24
PDGFA-201ENST00000354513 LMO3Q8TAP4 145 aa16.55■□□□□ 0.24
PDGFA-201ENST00000354513 SLC35F5Q8WV83 523 aa16.55■□□□□ 0.24
PDGFA-201ENST00000354513 UCMAQ8WVF2 138 aa16.55■□□□□ 0.24
PDGFA-201ENST00000354513 MYEOVQ96EZ4 313 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms