RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 FAM162AQ96A26 154 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 EYA3Q99504 573 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 SMAD5Q99717 465 aaKnown RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 IQGAP3Q86VI3 1631 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 PNPLA6Q8IY17 1366 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 ZNF701M0R085 212 aaPredicted RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 EFCAB14O75071 495 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 RBL1P28749 1068 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 MAGEA10P43363 369 aaPredicted RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 QARSP47897 775 aaKnown RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 COX10Q12887 443 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 SLC12A1Q13621 1099 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 NFE2L1Q14494 772 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 C6orf52Q5T4I8 152 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 ZNF790Q6PG37 636 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 KIAA0408Q6ZU52 694 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 GALNT12Q8IXK2 581 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 PPP1R36Q96LQ0 422 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 SRPK1Q96SB4 655 aaKnown RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 BFARQ9NZS9 450 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 LGALS13Q9UHV8 139 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 ENOPH1Q9UHY7 261 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 CDC42BPAQ5VT25 1732 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 ITM2AO43736 263 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 ADAMTS2O95450 1211 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 TBXAS1P24557 533 aaPredicted RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 MAPK1P28482 360 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 PRDX6P30041 224 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 TRIM23P36406 574 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 LIG4P49917 911 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 VBP1P61758 197 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 GALNTL6Q49A17 601 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 ZNF677Q86XU0 584 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 SEPT12Q8IYM1 358 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 TMEM35BQ8NCS4 154 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 FAM45AQ8TCE6 357 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 AGAP3Q96P47 875 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 NAT9Q9BTE0 207 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 AGXT2Q9BYV1 514 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 SEMA6AQ9H2E6 1030 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 SIK3Q9Y2K2 1263 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 LINC00854A0A1B0GVQ3 168 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 F8W031 263 aaPredicted RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 TCF7P36402 384 aaPredicted RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 PAGE2BQ5JRK9 111 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 MROH9Q5TGP6 573 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 ARHGAP17Q68EM7 881 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 FAM122CQ6P4D5 195 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 PLET1Q6UQ28 207 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 BNIPLQ7Z465 357 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 PJA1Q8NG27 643 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 RASGRP4Q8TDF6 673 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 AP3S1Q92572 193 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 PGBD4Q96DM1 585 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 C8orf48Q96LL4 319 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 ZNF560Q96MR9 790 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 YME1L1Q96TA2 773 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 INO80BQ9C086 356 aaPredicted RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 SPAG4Q9NPE6 437 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 COMMD8Q9NX08 183 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 CHORDC1Q9UHD1 332 aaPredicted RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 PHF11Q9UIL8 331 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 NUDT5Q9UKK9 219 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 SNX7Q9UNH6 387 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 WASF2Q9Y6W5 498 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 SALL1Q9NSC2 1324 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 C6orf229H3BNL8 230 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 TRIM38O00635 465 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 IRS4O14654 1257 aaPredicted RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 DCXO43602 365 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 COX4I1P13073 169 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 FMO5P49326 533 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 IL5RAQ01344 420 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 ZNF284Q2VY69 593 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 ASPRV1Q53RT3 343 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 HEATR6Q6AI08 1181 aaKnown RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 TRABD2AQ86V40 505 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 RASAL3Q86YV0 1011 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 OR8H3Q8N146 312 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 RASGEF1CQ8N431 466 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 FBXO36Q8NEA4 188 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 RTFDC1Q9BY42 306 aaPredicted RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 ADAM33Q9BZ11 813 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 FBXO6Q9NRD1 293 aaPredicted RBP5.16□□□□□ -1.58
SKP1-202ENST00000353411 TTLL3Q9Y4R7 772 aa5.16□□□□□ -1.58
SKP1-202ENST00000353411 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.15□□□□□ -1.58
SKP1-202ENST00000353411 PRKCBP05771 671 aa5.15□□□□□ -1.58
SKP1-202ENST00000353411 RALAP11233 206 aa5.15□□□□□ -1.58
SKP1-202ENST00000353411 HADHAP40939 763 aa5.15□□□□□ -1.58
SKP1-202ENST00000353411 TNK2Q07912 1038 aa5.15□□□□□ -1.58
SKP1-202ENST00000353411 HAUS6Q7Z4H7 955 aa5.15□□□□□ -1.58
SKP1-202ENST00000353411 DENND6AQ8IWF6 608 aa5.15□□□□□ -1.58
SKP1-202ENST00000353411 DDIASQ8IXT1 998 aa5.15□□□□□ -1.58
SKP1-202ENST00000353411 ZNF594Q96JF6 807 aaPredicted RBP5.15□□□□□ -1.58
SKP1-202ENST00000353411 UGT2B28Q9BY64 529 aa5.15□□□□□ -1.58
SKP1-202ENST00000353411 C1orf21Q9H246 121 aa5.15□□□□□ -1.58
SKP1-202ENST00000353411 NEK6Q9HC98 313 aa5.15□□□□□ -1.58
SKP1-202ENST00000353411 SLCO1B3Q9NPD5 702 aa5.15□□□□□ -1.58
SKP1-202ENST00000353411 CDV3Q9UKY7 258 aaKnown RBP5.15□□□□□ -1.58
SKP1-202ENST00000353411 PEX16Q9Y5Y5 336 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms