RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 SLC24A5Q71RS6 500 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 XYLT1Q86Y38 959 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 TAB3Q8N5C8 712 aaPredicted RBP8.91□□□□□ -0.98
TRIM55-204ENST00000353317 TEX9Q8N6V9 391 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 EMC1Q8N766 993 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 NAT8LQ8N9F0 302 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 ZNF398Q8TD17 642 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 KHSRPQ92945 711 aaKnown RBP eCLIP8.91□□□□□ -0.98
TRIM55-204ENST00000353317 CADM1Q9BY67 442 aaKnown RBP8.91□□□□□ -0.98
TRIM55-204ENST00000353317 B3GNT5Q9BYG0 378 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 DCLRE1BQ9H816 532 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 SAR1AQ9NR31 198 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 CHD7Q9P2D1 2997 aa8.91□□□□□ -0.98
TRIM55-204ENST00000353317 ZNF638Q14966 1978 aaKnown RBP8.91□□□□□ -0.98
TRIM55-204ENST00000353317 TCRBV7S3A2A0A539 114 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 CFAP69A5D8W1 941 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 DPPA5A6NC42 116 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 C3orf70A6NLC5 250 aaPredicted RBP8.9□□□□□ -0.98
TRIM55-204ENST00000353317 GABRDO14764 452 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 LSM8O95777 96 aaKnown RBP8.9□□□□□ -0.98
TRIM55-204ENST00000353317 RPLP2P05387 115 aaKnown RBP8.9□□□□□ -0.98
TRIM55-204ENST00000353317 PDHA1P08559 390 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 PCK1P35558 622 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 CACNA2D1P54289 1103 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 YWHAEP62258 255 aaKnown RBP8.9□□□□□ -0.98
TRIM55-204ENST00000353317 SEPT7Q16181 437 aaKnown RBP8.9□□□□□ -0.98
TRIM55-204ENST00000353317 SMTNL2Q2TAL5 461 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 GOLGA7BQ2TAP0 167 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 DNAJC24Q6P3W2 148 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 LRRC6Q86X45 466 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 ADGRF2Q8IZF7 708 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 CRYBG2Q8N1P7 616 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 BANPQ8N9N5 519 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 FBXO36Q8NEA4 188 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 ARMC2Q8NEN0 867 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 APPL2Q8NEU8 664 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 ACTL9Q8TC94 416 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 ZNF483Q8TF39 744 aaPredicted RBP8.9□□□□□ -0.98
TRIM55-204ENST00000353317 CLEC4CQ8WTT0 213 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 DCAKDQ8WVC6 231 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 PRR11Q96HE9 360 aaPredicted RBP8.9□□□□□ -0.98
TRIM55-204ENST00000353317 TMEM209Q96SK2 561 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 ACSS3Q9H6R3 686 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 MANSC1Q9H8J5 431 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 CRTAC1Q9NQ79 661 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 ARL8BQ9NVJ2 186 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 HEY2Q9UBP5 337 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 FETUBQ9UGM5 382 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 NLRC5Q86WI3 1866 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 PTPRDP23468 1912 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 E5RJQ4 531 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 TROVE2P10155 538 aaKnown RBP eCLIP8.9□□□□□ -0.98
TRIM55-204ENST00000353317 ADORA2BP29275 332 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 PHBP35232 272 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 TUBP50607 506 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 OTUD4Q01804 1114 aaKnown RBP8.9□□□□□ -0.98
TRIM55-204ENST00000353317 SV2CQ496J9 727 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 KCNT1Q5JUK3 1230 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 SH3PXD2AQ5TCZ1 1133 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 ANKRD33Q7Z3H0 272 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 TMCO2Q7Z6W1 182 aaPredicted RBP8.9□□□□□ -0.98
TRIM55-204ENST00000353317 DEFB128Q7Z7B8 93 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 PPIL6Q8IXY8 311 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 ATP11CQ8NB49 1132 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 SLC35F5Q8WV83 523 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 NDRG1Q92597 394 aaKnown RBP8.9□□□□□ -0.98
TRIM55-204ENST00000353317 PTCD3Q96EY7 689 aaKnown RBP8.9□□□□□ -0.98
TRIM55-204ENST00000353317 LBHD1Q9BQE6 289 aaPredicted RBP8.9□□□□□ -0.98
TRIM55-204ENST00000353317 RHOBTB2Q9BYZ6 727 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 YIPF3Q9GZM5 350 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 VPS11Q9H270 941 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 KCNK13Q9HB14 408 aa8.9□□□□□ -0.98
TRIM55-204ENST00000353317 FBXO6Q9NRD1 293 aaPredicted RBP8.9□□□□□ -0.98
TRIM55-204ENST00000353317 RPL26L1Q9UNX3 145 aaKnown RBP8.9□□□□□ -0.98
TRIM55-204ENST00000353317 MYBPHLA2RUH7 354 aa8.89□□□□□ -0.99
TRIM55-204ENST00000353317 TM9SF1O15321 606 aa8.89□□□□□ -0.99
TRIM55-204ENST00000353317 XPOTO43592 962 aaKnown RBP8.89□□□□□ -0.99
TRIM55-204ENST00000353317 CCDC22O60826 627 aa8.89□□□□□ -0.99
TRIM55-204ENST00000353317 GRAP2O75791 330 aa8.89□□□□□ -0.99
TRIM55-204ENST00000353317 B3GAT3O94766 335 aa8.89□□□□□ -0.99
TRIM55-204ENST00000353317 TMEM63AO94886 807 aa8.89□□□□□ -0.99
TRIM55-204ENST00000353317 CALB1P05937 261 aa8.89□□□□□ -0.99
TRIM55-204ENST00000353317 ACADSP16219 412 aa8.89□□□□□ -0.99
TRIM55-204ENST00000353317 SERPINB3P29508 390 aa8.89□□□□□ -0.99
TRIM55-204ENST00000353317 RPL22P35268 128 aaKnown RBP8.89□□□□□ -0.99
TRIM55-204ENST00000353317 RAB27AP51159 221 aa8.89□□□□□ -0.99
TRIM55-204ENST00000353317 NRLP54845 237 aa8.89□□□□□ -0.99
TRIM55-204ENST00000353317 ARL4CP56559 192 aa8.89□□□□□ -0.99
TRIM55-204ENST00000353317 SESN3P58005 492 aa8.89□□□□□ -0.99
TRIM55-204ENST00000353317 PIGHQ14442 188 aaPredicted RBP8.89□□□□□ -0.99
TRIM55-204ENST00000353317 CMPK2Q5EBM0 449 aa8.89□□□□□ -0.99
TRIM55-204ENST00000353317 PPP1R2P3Q6NXS1 205 aa8.89□□□□□ -0.99
TRIM55-204ENST00000353317 PCGF5Q86SE9 256 aa8.89□□□□□ -0.99
TRIM55-204ENST00000353317 SLC2A14Q8TDB8 520 aa8.89□□□□□ -0.99
TRIM55-204ENST00000353317 DNAJC9Q8WXX5 260 aa8.89□□□□□ -0.99
TRIM55-204ENST00000353317 PAWRQ96IZ0 340 aaKnown RBP8.89□□□□□ -0.99
TRIM55-204ENST00000353317 ZNF560Q96MR9 790 aa8.89□□□□□ -0.99
TRIM55-204ENST00000353317 BTBD10Q9BSF8 475 aa8.89□□□□□ -0.99
TRIM55-204ENST00000353317 ZNF518BQ9C0D4 1074 aa8.89□□□□□ -0.99
TRIM55-204ENST00000353317 TBC1D13Q9NVG8 400 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms