RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 DEPTORQ8TB45 409 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 RFT1Q96AA3 541 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 UBTD1Q9HAC8 227 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 GJB4Q9NTQ9 266 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 TXLNGQ9NUQ3 528 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 NKIRAS1Q9NYS0 192 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 SSX2IPQ9Y2D8 614 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 RAP2CQ9Y3L5 183 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 ATP6V0A2Q9Y487 856 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 NRKQ7Z2Y5 1582 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 GPR32O75388 356 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 UBXN7O94888 489 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 BCL10O95999 233 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 IL2RAP01589 272 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 MMP1P03956 469 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 ITGB1P05556 798 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 ENO2P09104 434 aaPredicted RBP6.16□□□□□ -1.42
RFC1-201ENST00000349703 SPATA31D3P0C874 917 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 PHKG2P15735 406 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 TNFRSF8P28908 595 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 GPR85P60893 370 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 GCKRQ14397 625 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 MUM1Q2TAK8 710 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 CEP55Q53EZ4 464 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 EEF1DP3Q658K8 133 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 SPATA31D4Q6ZUB0 917 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 FASTKD5Q7L8L6 764 aaKnown RBP6.16□□□□□ -1.42
RFC1-201ENST00000349703 PHYKPLQ8IUZ5 450 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 UBQLNLQ8IYU4 475 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 GDAP1Q8TB36 358 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 MYCBPAPQ8TBZ2 947 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 AENQ8WTP8 325 aaKnown RBP6.16□□□□□ -1.42
RFC1-201ENST00000349703 ANKS1AQ92625 1134 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 TMEM176AQ96HP8 235 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 DHTKD1Q96HY7 919 aaPredicted RBP6.16□□□□□ -1.42
RFC1-201ENST00000349703 PBKQ96KB5 322 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 ZSWIM3Q96MP5 696 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 HHIPQ96QV1 700 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 EPB41L1Q9H4G0 881 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 NFKBIL1Q9UBC1 381 aaPredicted RBP6.16□□□□□ -1.42
RFC1-201ENST00000349703 DBNLQ9UJU6 430 aaKnown RBP6.16□□□□□ -1.42
RFC1-201ENST00000349703 TCHHQ07283 1943 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 MROH7-TTC4A0A0A0MT08 1334 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 A0A1W2PRX2 142 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 TEX33O43247 280 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 PAGE1O75459 146 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 ATP5HO75947 161 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 ENDOD1O94919 500 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 PROCP04070 461 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 CBSLP0DN79 551 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 KCNA2P16389 499 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 HOXC9P31274 260 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 CBSP35520 551 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 GIPRP48546 466 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 CYP2J2P51589 502 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 POLD3Q15054 466 aaPredicted RBP6.16□□□□□ -1.42
RFC1-201ENST00000349703 SNAPC1Q16533 368 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 RARS2Q5T160 578 aaKnown RBP6.16□□□□□ -1.42
RFC1-201ENST00000349703 CYB5D2Q8WUJ1 264 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 FBLIM1Q8WUP2 373 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 ESR2Q92731 530 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 CHMP6Q96FZ7 201 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 PAGE5Q96GU1 130 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 GMCL1Q96IK5 515 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 ZNF845Q96IR2 970 aaPredicted RBP6.16□□□□□ -1.42
RFC1-201ENST00000349703 MUC13Q9H3R2 512 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 ADPRHL2Q9NX46 363 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 CTTNBP2NLQ9P2B4 639 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 KLHL14Q9P2G3 628 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 CAPN11Q9UMQ6 739 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 SMG5Q9UPR3 1016 aaKnown RBP6.16□□□□□ -1.42
RFC1-201ENST00000349703 CD163L1Q9NR16 1453 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 MLH3Q9UHC1 1453 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 GTPBP10A4D1E9 387 aaKnown RBP6.16□□□□□ -1.42
RFC1-201ENST00000349703 AQP12BA6NM10 295 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 LIN7AO14910 233 aaPredicted RBP6.16□□□□□ -1.42
RFC1-201ENST00000349703 CTDNEP1O95476 244 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 CALCBP10092 127 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 PCP11498 1178 aaKnown RBP6.16□□□□□ -1.42
RFC1-201ENST00000349703 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.16□□□□□ -1.42
RFC1-201ENST00000349703 ADGRF1Q5T601 910 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 MZT2BQ6NZ67 158 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 MPRIPQ6WCQ1 1025 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 IQCHQ86VS3 1027 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 RBM12BQ8IXT5 1001 aaKnown RBP6.16□□□□□ -1.42
RFC1-201ENST00000349703 SRFBP1Q8NEF9 429 aaKnown RBP6.16□□□□□ -1.42
RFC1-201ENST00000349703 SPATA4Q8NEY3 305 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 ZCCHC14Q8WYQ9 949 aaKnown RBP6.16□□□□□ -1.42
RFC1-201ENST00000349703 GCOM2Q9BZD3 368 aaPredicted RBP6.16□□□□□ -1.42
RFC1-201ENST00000349703 COPS7AQ9UBW8 275 aa6.16□□□□□ -1.42
RFC1-201ENST00000349703 FAM237AA0A1B0GTK4 181 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 PRR23AA6NEV1 266 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 PRRT4C9JH25 899 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 RTCAO00442 366 aaKnown RBP6.15□□□□□ -1.42
RFC1-201ENST00000349703 TOM1O60784 492 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 SLC25A12O75746 678 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 HMOX2P30519 316 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 CDC16Q13042 620 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 UAP1Q16222 522 aaPredicted RBP6.15□□□□□ -1.42
RFC1-201ENST00000349703 SGMS1Q86VZ5 419 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms