RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 ATF6P18850 670 aa22.22■■□□□ 1.15
TSPAN3-202ENST00000346495 CCR1P32246 355 aa22.22■■□□□ 1.15
TSPAN3-202ENST00000346495 TPI1P60174 286 aa22.22■■□□□ 1.15
TSPAN3-202ENST00000346495 DHX9Q08211 1270 aaKnown RBP22.22■■□□□ 1.15
TSPAN3-202ENST00000346495 TAF10Q12962 218 aa22.22■■□□□ 1.15
TSPAN3-202ENST00000346495 GPS1Q13098 491 aa22.22■■□□□ 1.15
TSPAN3-202ENST00000346495 DPYSQ14117 519 aa22.22■■□□□ 1.15
TSPAN3-202ENST00000346495 PPP2R5DQ14738 602 aa22.22■■□□□ 1.15
TSPAN3-202ENST00000346495 P3H1Q32P28 736 aa22.22■■□□□ 1.15
TSPAN3-202ENST00000346495 SPDYCQ5MJ68 293 aa22.22■■□□□ 1.15
TSPAN3-202ENST00000346495 RHBDF2Q6PJF5 856 aa22.22■■□□□ 1.15
TSPAN3-202ENST00000346495 PRUNE1Q86TP1 453 aa22.22■■□□□ 1.15
TSPAN3-202ENST00000346495 CDKL3Q8IVW4 592 aaPredicted RBP22.22■■□□□ 1.15
TSPAN3-202ENST00000346495 UNC45BQ8IWX7 931 aa22.22■■□□□ 1.15
TSPAN3-202ENST00000346495 VPS52Q8N1B4 723 aa22.22■■□□□ 1.15
TSPAN3-202ENST00000346495 GIPC2Q8TF65 315 aa22.22■■□□□ 1.15
TSPAN3-202ENST00000346495 EPAS1Q99814 870 aa22.22■■□□□ 1.15
TSPAN3-202ENST00000346495 TTLL2Q9BWV7 592 aa22.22■■□□□ 1.15
TSPAN3-202ENST00000346495 TXLNGYQ9BZA5 131 aa22.22■■□□□ 1.15
TSPAN3-202ENST00000346495 TSPYL1Q9H0U9 437 aa22.22■■□□□ 1.15
TSPAN3-202ENST00000346495 OSBPL2Q9H1P3 480 aa22.22■■□□□ 1.15
TSPAN3-202ENST00000346495 BCLAF3A2AJT9 711 aaKnown RBP22.21■■□□□ 1.15
TSPAN3-202ENST00000346495 GOLGA6BA6NDN3 693 aa22.21■■□□□ 1.15
TSPAN3-202ENST00000346495 I6L893 689 aaPredicted RBP22.21■■□□□ 1.15
TSPAN3-202ENST00000346495 TP73O15350 636 aa22.21■■□□□ 1.15
TSPAN3-202ENST00000346495 GDF10P55107 478 aa22.21■■□□□ 1.15
TSPAN3-202ENST00000346495 CREMQ03060 361 aa22.21■■□□□ 1.15
TSPAN3-202ENST00000346495 RAB33AQ14088 237 aa22.21■■□□□ 1.15
TSPAN3-202ENST00000346495 CFAP58Q5T655 872 aa22.21■■□□□ 1.15
TSPAN3-202ENST00000346495 HAPLN3Q96S86 360 aa22.21■■□□□ 1.15
TSPAN3-202ENST00000346495 C10orf88Q9H8K7 445 aa22.21■■□□□ 1.15
TSPAN3-202ENST00000346495 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.21■■□□□ 1.15
TSPAN3-202ENST00000346495 MRPL17Q9NRX2 175 aaKnown RBP22.21■■□□□ 1.15
TSPAN3-202ENST00000346495 RARGP13631 454 aa22.2■■□□□ 1.15
TSPAN3-202ENST00000346495 GBE1Q04446 702 aa22.2■■□□□ 1.15
TSPAN3-202ENST00000346495 SLMAPQ14BN4 828 aa22.2■■□□□ 1.15
TSPAN3-202ENST00000346495 PCGF5Q86SE9 256 aa22.2■■□□□ 1.15
TSPAN3-202ENST00000346495 FAM71DQ8N9W8 422 aa22.2■■□□□ 1.15
TSPAN3-202ENST00000346495 OR12D3Q9UGF7 316 aa22.2■■□□□ 1.15
TSPAN3-202ENST00000346495 TPX2Q9ULW0 747 aaKnown RBP22.2■■□□□ 1.15
TSPAN3-202ENST00000346495 SSX2IPQ9Y2D8 614 aa22.2■■□□□ 1.15
TSPAN3-202ENST00000346495 SPDYE4A6NLX3 237 aa22.2■■□□□ 1.14
TSPAN3-202ENST00000346495 FAM72CH0Y354 149 aa22.2■■□□□ 1.14
TSPAN3-202ENST00000346495 FGF18O76093 207 aa22.2■■□□□ 1.14
TSPAN3-202ENST00000346495 HSD17B3P37058 310 aa22.2■■□□□ 1.14
TSPAN3-202ENST00000346495 SLC10A2Q12908 348 aaPredicted RBP22.2■■□□□ 1.14
TSPAN3-202ENST00000346495 PAFAH1B3Q15102 231 aaKnown RBP22.2■■□□□ 1.14
TSPAN3-202ENST00000346495 FAM72AQ5TYM5 149 aa22.2■■□□□ 1.14
TSPAN3-202ENST00000346495 FAM72DQ6L9T8 149 aa22.2■■□□□ 1.14
TSPAN3-202ENST00000346495 HIBCHQ6NVY1 386 aaPredicted RBP22.2■■□□□ 1.14
TSPAN3-202ENST00000346495 PDZD4Q76G19 769 aaPredicted RBP22.2■■□□□ 1.14
TSPAN3-202ENST00000346495 FAM72BQ86X60 149 aa22.2■■□□□ 1.14
TSPAN3-202ENST00000346495 HERVK_113Q902F9 699 aa22.2■■□□□ 1.14
TSPAN3-202ENST00000346495 FOXP3Q9BZS1 431 aa22.2■■□□□ 1.14
TSPAN3-202ENST00000346495 ETNK2Q9NVF9 386 aa22.2■■□□□ 1.14
TSPAN3-202ENST00000346495 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.2■■□□□ 1.14
TSPAN3-202ENST00000346495 DTLQ9NZJ0 730 aa22.2■■□□□ 1.14
TSPAN3-202ENST00000346495 CXXC1Q9P0U4 656 aaPredicted RBP22.2■■□□□ 1.14
TSPAN3-202ENST00000346495 FNIP2Q9P278 1114 aa22.2■■□□□ 1.14
TSPAN3-202ENST00000346495 NUDT5Q9UKK9 219 aa22.2■■□□□ 1.14
TSPAN3-202ENST00000346495 TLR6Q9Y2C9 796 aa22.2■■□□□ 1.14
TSPAN3-202ENST00000346495 ATP8A1Q9Y2Q0 1164 aa22.2■■□□□ 1.14
TSPAN3-202ENST00000346495 HACD1B0YJ81 288 aa22.19■■□□□ 1.14
TSPAN3-202ENST00000346495 DCLK1O15075 740 aa22.19■■□□□ 1.14
TSPAN3-202ENST00000346495 MSI1O43347 362 aaKnown RBP22.19■■□□□ 1.14
TSPAN3-202ENST00000346495 SEC24AO95486 1093 aa22.19■■□□□ 1.14
TSPAN3-202ENST00000346495 ZDHHC11BP0C7U3 371 aa22.19■■□□□ 1.14
TSPAN3-202ENST00000346495 SLC2A3P11169 496 aa22.19■■□□□ 1.14
TSPAN3-202ENST00000346495 RPL22P35268 128 aaKnown RBP22.19■■□□□ 1.14
TSPAN3-202ENST00000346495 SLC45A4Q5BKX6 768 aa22.19■■□□□ 1.14
TSPAN3-202ENST00000346495 IQCKQ8N0W5 287 aa22.19■■□□□ 1.14
TSPAN3-202ENST00000346495 PHOSPHO2Q8TCD6 241 aa22.19■■□□□ 1.14
TSPAN3-202ENST00000346495 CLP1Q92989 425 aaKnown RBP22.19■■□□□ 1.14
TSPAN3-202ENST00000346495 RTP4Q96DX8 246 aa22.19■■□□□ 1.14
TSPAN3-202ENST00000346495 RUFY1Q96T51 708 aa22.19■■□□□ 1.14
TSPAN3-202ENST00000346495 UBE2OQ9C0C9 1292 aaKnown RBP22.19■■□□□ 1.14
TSPAN3-202ENST00000346495 ADAM7Q9H2U9 754 aa22.19■■□□□ 1.14
TSPAN3-202ENST00000346495 CYP4F11Q9HBI6 524 aa22.19■■□□□ 1.14
TSPAN3-202ENST00000346495 USP29Q9HBJ7 922 aa22.19■■□□□ 1.14
TSPAN3-202ENST00000346495 MAFFQ9ULX9 164 aa22.19■■□□□ 1.14
TSPAN3-202ENST00000346495 SLC4A7Q9Y6M7 1214 aa22.19■■□□□ 1.14
TSPAN3-202ENST00000346495 KCNN4O15554 427 aa22.18■■□□□ 1.14
TSPAN3-202ENST00000346495 LINC00271P0C7V0 271 aa22.18■■□□□ 1.14
TSPAN3-202ENST00000346495 ERCC2P18074 760 aa22.18■■□□□ 1.14
TSPAN3-202ENST00000346495 DNAJB2P25686 324 aa22.18■■□□□ 1.14
TSPAN3-202ENST00000346495 HTR7P34969 479 aa22.18■■□□□ 1.14
TSPAN3-202ENST00000346495 PMS2P54278 862 aa22.18■■□□□ 1.14
TSPAN3-202ENST00000346495 RASIP1Q5U651 963 aa22.18■■□□□ 1.14
TSPAN3-202ENST00000346495 CEP128Q6ZU80 1094 aa22.18■■□□□ 1.14
TSPAN3-202ENST00000346495 HERC6Q8IVU3 1022 aa22.18■■□□□ 1.14
TSPAN3-202ENST00000346495 PDZD8Q8NEN9 1154 aa22.18■■□□□ 1.14
TSPAN3-202ENST00000346495 UBLCP1Q8WVY7 318 aaPredicted RBP22.18■■□□□ 1.14
TSPAN3-202ENST00000346495 OVCA2Q8WZ82 227 aa22.18■■□□□ 1.14
TSPAN3-202ENST00000346495 OLFM3Q96PB7 478 aa22.18■■□□□ 1.14
TSPAN3-202ENST00000346495 QKIQ96PU8 341 aaKnown RBP eCLIP22.18■■□□□ 1.143e-6■□□□□ 10.1
TSPAN3-202ENST00000346495 RAD9AQ99638 391 aa22.18■■□□□ 1.14
TSPAN3-202ENST00000346495 MED4Q9NPJ6 270 aa22.18■■□□□ 1.14
TSPAN3-202ENST00000346495 MAGED2Q9UNF1 606 aaPredicted RBP22.18■■□□□ 1.14
TSPAN3-202ENST00000346495 RAD54BQ9Y620 910 aa22.18■■□□□ 1.14
TSPAN3-202ENST00000346495 MFSD11O43934 449 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms