RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 LDB1Q86U70 411 aaPredicted RBP13.73□□□□□ -0.21
CASC4-202ENST00000345795 OSTM1Q86WC4 334 aa13.73□□□□□ -0.21
CASC4-202ENST00000345795 THEM5Q8N1Q8 247 aa13.73□□□□□ -0.21
CASC4-202ENST00000345795 HTR3CQ8WXA8 447 aa13.73□□□□□ -0.21
CASC4-202ENST00000345795 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.73□□□□□ -0.219e-7■■■■■ 91.8
CASC4-202ENST00000345795 AGO3Q9H9G7 860 aaKnown RBP13.73□□□□□ -0.21
CASC4-202ENST00000345795 CHST12Q9NRB3 414 aa13.73□□□□□ -0.21
CASC4-202ENST00000345795 IARS2Q9NSE4 1012 aaKnown RBP13.73□□□□□ -0.21
CASC4-202ENST00000345795 ARL2BPQ9Y2Y0 163 aa13.73□□□□□ -0.21
CASC4-202ENST00000345795 C2CD4BA6NLJ0 364 aa13.73□□□□□ -0.21
CASC4-202ENST00000345795 CXorf49A8MYA2 514 aaPredicted RBP13.73□□□□□ -0.21
CASC4-202ENST00000345795 MYL2P10916 166 aa13.73□□□□□ -0.21
CASC4-202ENST00000345795 TGM2P21980 687 aa13.73□□□□□ -0.21
CASC4-202ENST00000345795 FOXN2P32314 431 aa13.73□□□□□ -0.21
CASC4-202ENST00000345795 HDAC4P56524 1084 aa13.73□□□□□ -0.21
CASC4-202ENST00000345795 THOC5Q13769 683 aaKnown RBP13.73□□□□□ -0.21
CASC4-202ENST00000345795 CFAP52Q8N1V2 620 aa13.73□□□□□ -0.21
CASC4-202ENST00000345795 PGM2Q96G03 612 aa13.73□□□□□ -0.21
CASC4-202ENST00000345795 FAM161BQ96MY7 647 aa13.73□□□□□ -0.21
CASC4-202ENST00000345795 OR12D3Q9UGF7 316 aa13.73□□□□□ -0.21
CASC4-202ENST00000345795 HSPA4LO95757 839 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 MT-CYBP00156 380 aaPredicted RBP13.72□□□□□ -0.21
CASC4-202ENST00000345795 NPR3P17342 541 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 PEX19P40855 299 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 GRM5P41594 1212 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 NME5P56597 212 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 EFHC1Q5JVL4 640 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 GDF6Q6KF10 455 aaPredicted RBP13.72□□□□□ -0.21
CASC4-202ENST00000345795 CYB5D1Q6P9G0 228 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 CEP128Q6ZU80 1094 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 OTOP3Q7RTS5 596 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 KCNH4Q9UQ05 1017 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 ATICP31939 592 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 DLG2Q15700 870 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 CERCAMQ5T4B2 595 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 PDZD4Q76G19 769 aaPredicted RBP13.72□□□□□ -0.21
CASC4-202ENST00000345795 MYLPFQ96A32 169 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 RPRD1AQ96P16 312 aaPredicted RBP13.72□□□□□ -0.21
CASC4-202ENST00000345795 CSPG4P5Q96PW8 444 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 GTSE1Q9NYZ3 720 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 HCSTQ9UBK5 93 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 DOCK5Q9H7D0 1870 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 SERPINB3P29508 390 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 GPR15P49685 360 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 GATMP50440 423 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 NSUN2Q08J23 767 aaKnown RBP eCLIP13.72□□□□□ -0.21
CASC4-202ENST00000345795 PEX6Q13608 980 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 NOMO1Q15155 1222 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 ZRSR2Q15696 482 aaKnown RBP13.72□□□□□ -0.21
CASC4-202ENST00000345795 NOMO2Q5JPE7 1267 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 TRNP1Q6NT89 227 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 RGMBQ6NW40 437 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 SYDE1Q6ZW31 735 aaPredicted RBP13.72□□□□□ -0.21
CASC4-202ENST00000345795 PARP9Q8IXQ6 854 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 NSMCE1Q8WV22 266 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 MARK4Q96L34 752 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 SRPK1Q96SB4 655 aaKnown RBP13.72□□□□□ -0.21
CASC4-202ENST00000345795 KCTD15Q96SI1 283 aaPredicted RBP13.72□□□□□ -0.21
CASC4-202ENST00000345795 EPAS1Q99814 870 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 OMDQ99983 421 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 NCAPGQ9BPX3 1015 aa13.72□□□□□ -0.21
CASC4-202ENST00000345795 SKAP2O75563 359 aaPredicted RBP13.71□□□□□ -0.21
CASC4-202ENST00000345795 NUDT17P0C025 328 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 CCND3P30281 292 aaPredicted RBP13.71□□□□□ -0.21
CASC4-202ENST00000345795 STIP1P31948 543 aaKnown RBP13.71□□□□□ -0.21
CASC4-202ENST00000345795 PPP1R2P3Q6NXS1 205 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 LCLAT1Q6UWP7 414 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 NLRP9Q7RTR0 991 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 FAM228AQ86W67 206 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 ATPAF2Q8N5M1 289 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 OLIG1Q8TAK6 271 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 ZC3H15Q8WU90 426 aaKnown RBP13.71□□□□□ -0.21
CASC4-202ENST00000345795 P2RY11Q96G91 374 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 KATNAL1Q9BW62 490 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 MIOSQ9NXC5 875 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 FAM72CH0Y354 149 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 HAUS5O94927 633 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 SERPINB6P35237 376 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 MSX2P35548 267 aaPredicted RBP13.71□□□□□ -0.21
CASC4-202ENST00000345795 MMP13P45452 471 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 WDR4P57081 412 aaKnown RBP13.71□□□□□ -0.21
CASC4-202ENST00000345795 PLIN5Q00G26 463 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 YWHAHQ04917 246 aaPredicted RBP13.71□□□□□ -0.21
CASC4-202ENST00000345795 USP10Q14694 798 aaKnown RBP13.71□□□□□ -0.21
CASC4-202ENST00000345795 RNASEH2BQ5TBB1 312 aaKnown RBP13.71□□□□□ -0.21
CASC4-202ENST00000345795 FAM72AQ5TYM5 149 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 FAM72DQ6L9T8 149 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 VSTM1Q6UX27 236 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 FAM72BQ86X60 149 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 SNX31Q8N9S9 440 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 ANKRD52Q8NB46 1076 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 BLOC1S5Q8TDH9 187 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 RMDN1Q96DB5 314 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 APBA2Q99767 749 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 ROPN1BQ9BZX4 212 aaPredicted RBP13.71□□□□□ -0.21
CASC4-202ENST00000345795 EPB41L4BQ9H329 900 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 TASP1Q9H6P5 420 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 ROPN1Q9HAT0 212 aaPredicted RBP13.71□□□□□ -0.21
CASC4-202ENST00000345795 NT5MQ9NPB1 228 aa13.71□□□□□ -0.21
CASC4-202ENST00000345795 C2CD2Q9Y426 696 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms