RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 TAS2R14Q9NYV8 317 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 CNOT8Q9UFF9 292 aaKnown RBP12.32□□□□□ -0.44
SNCA-202ENST00000345009 TMEM59LQ9UK28 342 aa12.32□□□□□ -0.44
SNCA-202ENST00000345009 MRPS17Q9Y2R5 130 aaKnown RBP12.32□□□□□ -0.44
SNCA-202ENST00000345009 OBSL1O75147 1896 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 NUP210Q8TEM1 1887 aaPredicted RBP12.31□□□□□ -0.44
SNCA-202ENST00000345009 NARSO43776 548 aaKnown RBP12.31□□□□□ -0.44
SNCA-202ENST00000345009 CYBBP04839 570 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 H2AFZP0C0S5 128 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 ABCB4P21439 1286 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 CORO1AP31146 461 aaKnown RBP12.31□□□□□ -0.44
SNCA-202ENST00000345009 ZXDBP98169 803 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 PRKCQQ04759 706 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 DEUP1Q05D60 604 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 GFPT1Q06210 699 aaPredicted RBP12.31□□□□□ -0.44
SNCA-202ENST00000345009 NME3Q13232 169 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 MAMLD1Q13495 774 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 EML3Q32P44 896 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 PREPLQ4J6C6 727 aaPredicted RBP12.31□□□□□ -0.44
SNCA-202ENST00000345009 ADGRF1Q5T601 910 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 H2AFVQ71UI9 128 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 PHLDB2Q86SQ0 1253 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 TAC4Q86UU9 113 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 RALGPS2Q86X27 583 aaPredicted RBP12.31□□□□□ -0.44
SNCA-202ENST00000345009 DENND1CQ8IV53 801 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 ADGRG2Q8IZP9 1017 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 ATP6V0D2Q8N8Y2 350 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 ADAM32Q8TC27 787 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 RXFP2Q8WXD0 754 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 CTNNBL1Q8WYA6 563 aaPredicted RBP12.31□□□□□ -0.44
SNCA-202ENST00000345009 PGAP3Q96FM1 320 aaPredicted RBP12.31□□□□□ -0.44
SNCA-202ENST00000345009 PIWIL1Q96J94 861 aaKnown RBP12.31□□□□□ -0.44
SNCA-202ENST00000345009 ZFYVE19Q96K21 471 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 NELL2Q99435 816 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 NPY6RQ99463 290 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 CHP1Q99653 195 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 NCAPGQ9BPX3 1015 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 IRX2Q9BZI1 471 aaPredicted RBP12.31□□□□□ -0.44
SNCA-202ENST00000345009 LINC00597Q9H2U6 94 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 MFSD1Q9H3U5 465 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 WDCPQ9H6R7 721 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 ECT2Q9H8V3 914 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 LCMT1Q9UIC8 334 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 WNT6Q9Y6F9 365 aa12.31□□□□□ -0.44
SNCA-202ENST00000345009 SYNJ2BP-COX16A0A087WUM0 186 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 TYW5A2RUC4 315 aaKnown RBP12.3□□□□□ -0.44
SNCA-202ENST00000345009 IRAK2O43187 625 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 MSI1O43347 362 aaKnown RBP12.3□□□□□ -0.44
SNCA-202ENST00000345009 RNF40O75150 1001 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 GPD1P21695 349 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 RFC1P35251 1148 aaPredicted RBP12.3□□□□□ -0.44
SNCA-202ENST00000345009 PTPN9P43378 593 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 SULT1E1P49888 294 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 ZNF143P52747 638 aaPredicted RBP12.3□□□□□ -0.44
SNCA-202ENST00000345009 GAD2Q05329 585 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 PPP2R5DQ14738 602 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 MLF2Q15773 248 aaPredicted RBP12.3□□□□□ -0.44
SNCA-202ENST00000345009 ASTE1Q2TB18 679 aaPredicted RBP12.3□□□□□ -0.44
SNCA-202ENST00000345009 ARL13BQ3SXY8 428 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 BRMS1LQ5PSV4 323 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 PLEKHA7Q6IQ23 1121 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 ZNF852Q6ZMS4 543 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 TRIM67Q6ZTA4 783 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 CCDC117Q8IWD4 279 aaPredicted RBP12.3□□□□□ -0.44
SNCA-202ENST00000345009 BBS7Q8IWZ6 715 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 TXLNBQ8N3L3 684 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 NT5C3BQ969T7 300 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 BTN2A3PQ96KV6 586 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 MCEEQ96PE7 176 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 BAG1Q99933 345 aaPredicted RBP12.3□□□□□ -0.44
SNCA-202ENST00000345009 CNPY3Q9BT09 278 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 ARHGEF3Q9NR81 526 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 GTSE1Q9NYZ3 720 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 COX16Q9P0S2 106 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 MYO1AQ9UBC5 1043 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 AGO1Q9UL18 857 aaKnown RBP12.3□□□□□ -0.44
SNCA-202ENST00000345009 PIAS3Q9Y6X2 628 aa12.3□□□□□ -0.44
SNCA-202ENST00000345009 C2CD4BA6NLJ0 364 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 ARNTLO00327 626 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 RNF8O76064 485 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 IGLV3-25P01717 112 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 IGLV3-27P01718 113 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 KLKB1P03952 638 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 RDXP35241 583 aaKnown RBP12.29□□□□□ -0.44
SNCA-202ENST00000345009 FLT3P36888 993 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 GALCP54803 685 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 ATP11AP98196 1134 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 TNK2Q07912 1038 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 DHCR24Q15392 516 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 ANO4Q32M45 955 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 ZC3H12AQ5D1E8 599 aaKnown RBP12.29□□□□□ -0.44
SNCA-202ENST00000345009 TRIM68Q6AZZ1 485 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 Q6ZNB5 142 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 STRADAQ7RTN6 431 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 SIX5Q8N196 739 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 CPXM2Q8N436 756 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 EMC1Q8N766 993 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 TTC13Q8NBP0 860 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 CCDC26Q8TAB7 109 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 OLIG1Q8TAK6 271 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms