RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 HMGB4Q8WW32 186 aa15.05■□□□□ -0
HMGN3-202ENST00000344726 PIWIL1Q96J94 861 aaKnown RBP15.05■□□□□ -0
HMGN3-202ENST00000344726 RTKNQ9BST9 563 aa15.05■□□□□ -0
HMGN3-202ENST00000344726 BCLAF3A2AJT9 711 aaKnown RBP15.04■□□□□ -0
HMGN3-202ENST00000344726 GABRG2P18507 467 aa15.04■□□□□ -0
HMGN3-202ENST00000344726 HARS2P49590 506 aaKnown RBP15.04■□□□□ -0
HMGN3-202ENST00000344726 PDCLQ13371 301 aa15.04■□□□□ -0
HMGN3-202ENST00000344726 GEN1Q17RS7 908 aa15.04■□□□□ -0
HMGN3-202ENST00000344726 PREPLQ4J6C6 727 aaPredicted RBP15.04■□□□□ -0
HMGN3-202ENST00000344726 USP39Q53GS9 565 aaKnown RBP15.04■□□□□ -0
HMGN3-202ENST00000344726 CDKAL1Q5VV42 579 aa15.04■□□□□ -0
HMGN3-202ENST00000344726 TMEM110Q86TL2 294 aa15.04■□□□□ -0
HMGN3-202ENST00000344726 SLC47A2Q86VL8 602 aa15.04■□□□□ -0
HMGN3-202ENST00000344726 PASD1Q8IV76 773 aa15.04■□□□□ -0
HMGN3-202ENST00000344726 KCNV2Q8TDN2 545 aa15.04■□□□□ -0
HMGN3-202ENST00000344726 DQX1Q8TE96 717 aaKnown RBP15.04■□□□□ -0
HMGN3-202ENST00000344726 MS4A3Q96HJ5 214 aa15.04■□□□□ -0
HMGN3-202ENST00000344726 DCBLD2Q96PD2 775 aa15.04■□□□□ -0
HMGN3-202ENST00000344726 GABRG3Q99928 467 aa15.04■□□□□ -0
HMGN3-202ENST00000344726 POLMQ9NP87 494 aaPredicted RBP15.04■□□□□ -0
HMGN3-202ENST00000344726 CD93Q9NPY3 652 aa15.04■□□□□ -0
HMGN3-202ENST00000344726 TAB2Q9NYJ8 693 aa15.04■□□□□ -0
HMGN3-202ENST00000344726 STOML2Q9UJZ1 356 aa15.04■□□□□ -0
HMGN3-202ENST00000344726 PCDHGC3Q9UN70 934 aa15.04■□□□□ -0
HMGN3-202ENST00000344726 NAALADL1Q9UQQ1 740 aa15.04■□□□□ -0
HMGN3-202ENST00000344726 SLC27A6Q9Y2P4 619 aa15.04■□□□□ -0
HMGN3-202ENST00000344726 PCDHGA5Q9Y5G8 931 aa15.04■□□□□ -0
HMGN3-202ENST00000344726 FHOD1Q9Y613 1164 aa15.04■□□□□ -0
HMGN3-202ENST00000344726 RAD54BQ9Y620 910 aa15.04■□□□□ -0
HMGN3-202ENST00000344726 MUC22E2RYF6 1773 aaPredicted RBP15.03■□□□□ -0
HMGN3-202ENST00000344726 WASH3PC4AMC7 463 aa15.03■□□□□ -0
HMGN3-202ENST00000344726 TSPAN3O60637 253 aa15.03■□□□□ -0
HMGN3-202ENST00000344726 RHOBTB1O94844 696 aa15.03■□□□□ -0
HMGN3-202ENST00000344726 NCAM1P13591 858 aa15.03■□□□□ -0
HMGN3-202ENST00000344726 HOXB2P14652 356 aa15.03■□□□□ -0
HMGN3-202ENST00000344726 EEF1GP26641 437 aaKnown RBP15.03■□□□□ -0
HMGN3-202ENST00000344726 NTSR1P30989 418 aa15.03■□□□□ -0
HMGN3-202ENST00000344726 ACADSBP45954 432 aa15.03■□□□□ -0
HMGN3-202ENST00000344726 SGSHP51688 502 aa15.03■□□□□ -0
HMGN3-202ENST00000344726 CREB5Q02930 508 aa15.03■□□□□ -0
HMGN3-202ENST00000344726 ELF2Q15723 593 aa15.03■□□□□ -0
HMGN3-202ENST00000344726 KLHDC7AQ5VTJ3 777 aa15.03■□□□□ -0
HMGN3-202ENST00000344726 SYPL2Q5VXT5 272 aa15.03■□□□□ -0
HMGN3-202ENST00000344726 FAM71AQ8IYT1 594 aa15.03■□□□□ -0
HMGN3-202ENST00000344726 ADAM32Q8TC27 787 aa15.03■□□□□ -0
HMGN3-202ENST00000344726 FAM149B1Q96BN6 582 aa15.03■□□□□ -0
HMGN3-202ENST00000344726 CPXM1Q96SM3 734 aa15.03■□□□□ -0
HMGN3-202ENST00000344726 NAA15Q9BXJ9 866 aaKnown RBP15.03■□□□□ -0
HMGN3-202ENST00000344726 SLC6A17Q9H1V8 727 aa15.03■□□□□ -0
HMGN3-202ENST00000344726 CACNA2D2Q9NY47 1150 aa15.03■□□□□ -0
HMGN3-202ENST00000344726 GOLGA6L7A0A1B0GV03 622 aa15.02■□□□□ -0
HMGN3-202ENST00000344726 PATE3B3GLJ2 98 aa15.02■□□□□ -0
HMGN3-202ENST00000344726 GOLGA6L22H0YM25 854 aa15.02■□□□□ -0
HMGN3-202ENST00000344726 PES1O00541 588 aaKnown RBP15.02■□□□□ -0
HMGN3-202ENST00000344726 ALDH1A2O94788 518 aa15.02■□□□□ -0
HMGN3-202ENST00000344726 LATS1O95835 1130 aa15.02■□□□□ -0
HMGN3-202ENST00000344726 SDHBP21912 280 aa15.02■□□□□ -0
HMGN3-202ENST00000344726 HOXD9P28356 352 aaPredicted RBP15.02■□□□□ -0
HMGN3-202ENST00000344726 SLC6A4P31645 630 aa15.02■□□□□ -0
HMGN3-202ENST00000344726 PTGER3P43115 390 aa15.02■□□□□ -0
HMGN3-202ENST00000344726 TBX4P57082 545 aa15.02■□□□□ -0
HMGN3-202ENST00000344726 PITX1P78337 314 aaPredicted RBP15.02■□□□□ -0
HMGN3-202ENST00000344726 DRAP1Q14919 205 aaPredicted RBP15.02■□□□□ -0
HMGN3-202ENST00000344726 KRT31Q15323 416 aa15.02■□□□□ -0
HMGN3-202ENST00000344726 TAF5Q15542 800 aa15.02■□□□□ -0
HMGN3-202ENST00000344726 AASDHQ4L235 1098 aaPredicted RBP15.02■□□□□ -0
HMGN3-202ENST00000344726 FAM133BQ5BKY9 247 aaKnown RBP15.02■□□□□ -0
HMGN3-202ENST00000344726 ADGRF1Q5T601 910 aa15.02■□□□□ -0
HMGN3-202ENST00000344726 TMEM215Q68D42 235 aa15.02■□□□□ -0
HMGN3-202ENST00000344726 NADSYN1Q6IA69 706 aa15.02■□□□□ -0
HMGN3-202ENST00000344726 NUDT18Q6ZVK8 323 aa15.02■□□□□ -0
HMGN3-202ENST00000344726 TRMT11Q7Z4G4 463 aaKnown RBP15.02■□□□□ -0
HMGN3-202ENST00000344726 TAC4Q86UU9 113 aa15.02■□□□□ -0
HMGN3-202ENST00000344726 CHPFQ8IZ52 775 aa15.02■□□□□ -0
HMGN3-202ENST00000344726 C1orf131Q8NDD1 294 aaKnown RBP15.02■□□□□ -0
HMGN3-202ENST00000344726 IPO4Q8TEX9 1081 aaKnown RBP15.02■□□□□ -0
HMGN3-202ENST00000344726 DDI1Q8WTU0 396 aa15.02■□□□□ -0
HMGN3-202ENST00000344726 GOLGA1Q92805 767 aa15.02■□□□□ -0
HMGN3-202ENST00000344726 FCRL2Q96LA5 508 aaPredicted RBP15.02■□□□□ -0
HMGN3-202ENST00000344726 LSM14BQ9BX40 385 aaKnown RBP15.02■□□□□ -0
HMGN3-202ENST00000344726 PLCB1Q9NQ66 1216 aa15.02■□□□□ -0
HMGN3-202ENST00000344726 VPS45Q9NRW7 570 aa15.02■□□□□ -0
HMGN3-202ENST00000344726 FANCLQ9NW38 375 aa15.02■□□□□ -0
HMGN3-202ENST00000344726 CALCOCO1Q9P1Z2 691 aa15.02■□□□□ -0
HMGN3-202ENST00000344726 BCCIPQ9P287 314 aaKnown RBP eCLIP15.02■□□□□ -0
HMGN3-202ENST00000344726 CNOT1A5YKK6 2376 aaKnown RBP15.02□□□□□ -0.01
HMGN3-202ENST00000344726 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.01□□□□□ -0.01
HMGN3-202ENST00000344726 TM4SF5O14894 197 aa15.01□□□□□ -0.01
HMGN3-202ENST00000344726 SART1O43290 800 aaKnown RBP15.01□□□□□ -0.01
HMGN3-202ENST00000344726 CAVIN2O95810 425 aa15.01□□□□□ -0.01
HMGN3-202ENST00000344726 CYBBP04839 570 aa15.01□□□□□ -0.01
HMGN3-202ENST00000344726 UCHL3P15374 230 aa15.01□□□□□ -0.01
HMGN3-202ENST00000344726 NDUFV2P19404 249 aa15.01□□□□□ -0.01
HMGN3-202ENST00000344726 KLK7P49862 253 aa15.01□□□□□ -0.01
HMGN3-202ENST00000344726 PTK2Q05397 1052 aa15.01□□□□□ -0.01
HMGN3-202ENST00000344726 RING1Q06587 406 aa15.01□□□□□ -0.01
HMGN3-202ENST00000344726 RAPGEF1Q13905 1077 aa15.01□□□□□ -0.01
HMGN3-202ENST00000344726 MPPE1Q53F39 396 aa15.01□□□□□ -0.01
HMGN3-202ENST00000344726 RFWD3Q6PCD5 774 aa15.01□□□□□ -0.01
HMGN3-202ENST00000344726 BEND5Q7L4P6 421 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms