RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 NBNO60934 754 aa18.52■□□□□ 0.55
SMC4-201ENST00000344722 ZSCAN5DPP0CG00 497 aa18.52■□□□□ 0.55
SMC4-201ENST00000344722 CSHL1Q14406 222 aa18.52■□□□□ 0.55
SMC4-201ENST00000344722 FAM45BPQ6NSW5 357 aa18.52■□□□□ 0.55
SMC4-201ENST00000344722 CDC42EP5Q6NZY7 148 aa18.52■□□□□ 0.55
SMC4-201ENST00000344722 MTMR9Q96QG7 549 aa18.52■□□□□ 0.55
SMC4-201ENST00000344722 ACSS3Q9H6R3 686 aa18.52■□□□□ 0.55
SMC4-201ENST00000344722 FBXO6Q9NRD1 293 aaPredicted RBP18.52■□□□□ 0.55
SMC4-201ENST00000344722 SNAP91O60641 907 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 APBA3O96018 575 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 TAF5Q15542 800 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 AARS2Q5JTZ9 985 aaKnown RBP18.51■□□□□ 0.55
SMC4-201ENST00000344722 IRF2BP2Q7Z5L9 587 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 OR7A2PQ8NGA2 310 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 LPAR1Q92633 364 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 RNF145Q96MT1 663 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 TBCBQ99426 244 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 POLR1BQ9H9Y6 1135 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 AP4E1Q9UPM8 1137 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 SPDYE5A6NIY4 337 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 RAD51BO15315 384 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 CD4P01730 458 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 BAATQ14032 418 aaPredicted RBP18.51■□□□□ 0.55
SMC4-201ENST00000344722 FRG1Q14331 258 aaKnown RBP18.51■□□□□ 0.55
SMC4-201ENST00000344722 SPDYE7PQ495Y7 208 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 ARHGAP17Q68EM7 881 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 ADCY4Q8NFM4 1077 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 NMRAL1Q9HBL8 299 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 KATNA1O75449 491 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 CYP2F1P24903 491 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 CRABP2P29373 138 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 AKT1P31749 480 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 CBX3Q13185 183 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 UGT3A1Q6NUS8 523 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 ZNF572Q7Z3I7 529 aaPredicted RBP18.51■□□□□ 0.55
SMC4-201ENST00000344722 ATG16L2Q8NAA4 619 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 EPS8L1Q8TE68 723 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 RPAP3Q9H6T3 665 aaPredicted RBP18.51■□□□□ 0.55
SMC4-201ENST00000344722 CISHQ9NSE2 258 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 DKK3Q9UBP4 350 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 RAB26Q9ULW5 256 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 TRMUO75648 421 aaKnown RBP18.51■□□□□ 0.55
SMC4-201ENST00000344722 TM7SF2O76062 418 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 GJB6O95452 261 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 TTC23LQ6PF05 361 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 EMC1Q8N766 993 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 MCRS1Q96EZ8 462 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 MMTAG2Q9BU76 263 aaKnown RBP18.51■□□□□ 0.55
SMC4-201ENST00000344722 LATS2Q9NRM7 1088 aa18.51■□□□□ 0.55
SMC4-201ENST00000344722 DCDC2CA8MYV0 355 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 TMEM114B3SHH9 223 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 ITGB3P05106 788 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 TPBGLP0DKB5 382 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 ETS1P14921 441 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 ADSSP30520 456 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 ARMCX6Q7L4S7 300 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 PQLC1Q8N2U9 271 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 RXFP2Q8WXD0 754 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 PRMT7Q9NVM4 692 aaPredicted RBP18.5■□□□□ 0.55
SMC4-201ENST00000344722 TJP2Q9UDY2 1190 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 OGTO15294 1046 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 IDH3BO43837 385 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 HSMCR30P0CW71 290 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 TMC7Q7Z402 723 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 CDH24Q86UP0 819 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 TRIM74Q86UV6 250 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 TRIM73Q86UV7 250 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 ZDHHC13Q8IUH4 622 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 SYTL1Q8IYJ3 562 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 MIER2Q8N344 545 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 SFRP1Q8N474 314 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 SNX31Q8N9S9 440 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 MBOAT7Q96N66 472 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 DGCR6LQ9BY27 220 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 MTMR12Q9C0I1 747 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 FANCEQ9HB96 536 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 PSMD13Q9UNM6 376 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 FAM25AB3EWG3 89 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 FAM25CB3EWG5 89 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 FAM25GB3EWG6 89 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 SGO1Q5FBB7 561 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 PDZK1Q5T2W1 519 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 PKN3Q6P5Z2 889 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 IRF2BP1Q8IU81 584 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 WDR49Q8IV35 697 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 GSTCDQ8NEC7 633 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 C19orf60Q96EN9 201 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 SLITRK1Q96PX8 696 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 PTTG2Q9NZH5 202 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 ANAPC2Q9UJX6 822 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 ENTPD3O75355 529 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 FECHP22830 423 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 NCF4Q15080 339 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 LRRC38Q5VT99 294 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 SLFN11Q7Z7L1 901 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 TBC1D16Q8TBP0 767 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 ZNF606Q8WXB4 792 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 COX4I2Q96KJ9 171 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 EBF2Q9HAK2 575 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 XPNPEP3Q9NQH7 507 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms