RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 ACTL9Q8TC94 416 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 POF1BQ8WVV4 589 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 MYLIPQ8WY64 445 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 ARNTL2Q8WYA1 636 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 C17orf80Q9BSJ5 609 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 MAGEB5Q9BZ81 275 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 LZTS1Q9Y250 596 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 HEY1Q9Y5J3 304 aa17.98■□□□□ 0.47
CLDN4-201ENST00000340958 APOC4-APOC2K7ER74 178 aa17.97■□□□□ 0.47
CLDN4-201ENST00000340958 MCF2LO15068 1137 aa17.97■□□□□ 0.47
CLDN4-201ENST00000340958 APOC2P02655 101 aa17.97■□□□□ 0.47
CLDN4-201ENST00000340958 GOT1P17174 413 aa17.97■□□□□ 0.47
CLDN4-201ENST00000340958 PLD1Q13393 1074 aa17.97■□□□□ 0.47
CLDN4-201ENST00000340958 TADA2BQ86TJ2 420 aa17.97■□□□□ 0.47
CLDN4-201ENST00000340958 MIB1Q86YT6 1006 aa17.97■□□□□ 0.47
CLDN4-201ENST00000340958 CSPG4P5Q96PW8 444 aa17.97■□□□□ 0.47
CLDN4-201ENST00000340958 GDF3Q9NR23 364 aa17.97■□□□□ 0.47
CLDN4-201ENST00000340958 TLR9Q9NR96 1032 aa17.97■□□□□ 0.47
CLDN4-201ENST00000340958 TMEM51Q9NW97 253 aa17.97■□□□□ 0.47
CLDN4-201ENST00000340958 CWC15Q9P013 229 aaKnown RBP17.97■□□□□ 0.47
CLDN4-201ENST00000340958 DNPEPQ9ULA0 475 aa17.97■□□□□ 0.47
CLDN4-201ENST00000340958 MYO16Q9Y6X6 1858 aa17.97■□□□□ 0.47
CLDN4-201ENST00000340958 PRUNE2Q8WUY3 3088 aa17.96■□□□□ 0.47
CLDN4-201ENST00000340958 TGM5O43548 720 aa17.96■□□□□ 0.47
CLDN4-201ENST00000340958 LILRB3O75022 631 aa17.96■□□□□ 0.47
CLDN4-201ENST00000340958 TGM2P21980 687 aa17.96■□□□□ 0.47
CLDN4-201ENST00000340958 IL4RP24394 825 aa17.96■□□□□ 0.47
CLDN4-201ENST00000340958 PTGIRP43119 386 aa17.96■□□□□ 0.47
CLDN4-201ENST00000340958 ERVFC1P60507 584 aa17.96■□□□□ 0.47
CLDN4-201ENST00000340958 BRMS1LQ5PSV4 323 aa17.96■□□□□ 0.47
CLDN4-201ENST00000340958 SYDE1Q6ZW31 735 aaPredicted RBP17.96■□□□□ 0.47
CLDN4-201ENST00000340958 ITIH5Q86UX2 942 aa17.96■□□□□ 0.47
CLDN4-201ENST00000340958 GSPT2Q8IYD1 628 aaKnown RBP17.96■□□□□ 0.47
CLDN4-201ENST00000340958 TCEAL8Q8IYN2 117 aa17.96■□□□□ 0.47
CLDN4-201ENST00000340958 PCDH19Q8TAB3 1148 aa17.96■□□□□ 0.47
CLDN4-201ENST00000340958 CASKIN2Q8WXE0 1202 aa17.96■□□□□ 0.47
CLDN4-201ENST00000340958 TGS1Q96RS0 853 aaKnown RBP17.96■□□□□ 0.47
CLDN4-201ENST00000340958 CDK5RAP1Q96SZ6 601 aaKnown RBP17.96■□□□□ 0.47
CLDN4-201ENST00000340958 ERP44Q9BS26 406 aa17.96■□□□□ 0.47
CLDN4-201ENST00000340958 TTLL2Q9BWV7 592 aa17.96■□□□□ 0.47
CLDN4-201ENST00000340958 FAM114A2Q9NRY5 505 aa17.96■□□□□ 0.47
CLDN4-201ENST00000340958 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.96■□□□□ 0.47
CLDN4-201ENST00000340958 RCOR3Q9P2K3 495 aaPredicted RBP17.96■□□□□ 0.47
CLDN4-201ENST00000340958 ASIC3Q9UHC3 531 aa17.96■□□□□ 0.47
CLDN4-201ENST00000340958 INSL5Q9Y5Q6 135 aa17.96■□□□□ 0.47
CLDN4-201ENST00000340958 ZNF487B1APH4 448 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 SGK1O00141 431 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 RFXAPO00287 272 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 TBX18O95935 607 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 MOCS2O96007 188 aaPredicted RBP17.95■□□□□ 0.46
CLDN4-201ENST00000340958 IGLV3-25P01717 112 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 SLC2A3P11169 496 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 VCPP55072 806 aaKnown RBP17.95■□□□□ 0.46
CLDN4-201ENST00000340958 TBX4P57082 545 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 TPI1P60174 286 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 EIF3EP60228 445 aaKnown RBP17.95■□□□□ 0.46
CLDN4-201ENST00000340958 ERVK-21P61565 698 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 SCAPQ12770 1279 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 CUL1Q13616 776 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 TRIP13Q15645 432 aaPredicted RBP17.95■□□□□ 0.46
CLDN4-201ENST00000340958 NPNTQ6UXI9 565 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 FAM71BQ8TC56 605 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 RSAD2Q8WXG1 361 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 KLHL5Q96PQ7 755 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 EPAS1Q99814 870 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 SIK2Q9H0K1 926 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 TRPM5Q9NZQ8 1165 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 MARCH2Q9P0N8 246 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 OR12D3Q9UGF7 316 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 SLC12A6Q9UHW9 1150 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 H7C0C1 242 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 TLR5O60602 858 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 APOEP02649 317 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 LRG1P02750 347 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 PECAM1P16284 738 aaPredicted RBP17.95■□□□□ 0.46
CLDN4-201ENST00000340958 AMPD1P23109 780 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 TNNT3P45378 269 aaPredicted RBP17.95■□□□□ 0.46
CLDN4-201ENST00000340958 ATP5OP48047 213 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 CARSP49589 748 aaKnown RBP17.95■□□□□ 0.46
CLDN4-201ENST00000340958 DRICH1Q6PGQ1 229 aaPredicted RBP17.95■□□□□ 0.46
CLDN4-201ENST00000340958 DARS2Q6PI48 645 aaKnown RBP17.95■□□□□ 0.46
CLDN4-201ENST00000340958 CCDC149Q6ZUS6 474 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 RFX8Q6ZV50 586 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 ZC3H18Q86VM9 953 aaKnown RBP17.95■□□□□ 0.46
CLDN4-201ENST00000340958 DDX42Q86XP3 938 aaKnown RBP eCLIP17.95■□□□□ 0.46
CLDN4-201ENST00000340958 PQLC3Q8N755 202 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 PLD5Q8N7P1 536 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 OVCA2Q8WZ82 227 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 SLCO2A1Q92959 643 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 FAF2Q96CS3 445 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 UXTQ9UBK9 157 aaPredicted RBP17.95■□□□□ 0.46
CLDN4-201ENST00000340958 NFU1Q9UMS0 254 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 TLR6Q9Y2C9 796 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 SNX24Q9Y343 169 aa17.95■□□□□ 0.46
CLDN4-201ENST00000340958 SLC12A8A0AV02 714 aa17.94■□□□□ 0.46
CLDN4-201ENST00000340958 IFNB1P01574 187 aa17.94■□□□□ 0.46
CLDN4-201ENST00000340958 HMBSP08397 361 aa17.94■□□□□ 0.46
CLDN4-201ENST00000340958 UBE3AQ05086 875 aa17.94■□□□□ 0.46
CLDN4-201ENST00000340958 ADGRE1Q14246 886 aa17.94■□□□□ 0.46
CLDN4-201ENST00000340958 PPP2R5DQ14738 602 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms