RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 FLOT2Q14254 428 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 PTK2BQ14289 1009 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 CHI3L2Q15782 390 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 TUBA3EQ6PEY2 450 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 PHTF2Q8N3S3 785 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 BANPQ8N9N5 519 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 BPIFB6Q8NFQ5 453 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 OR5H6Q8NGV6 325 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 SLC30A5Q8TAD4 765 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 KLHL32Q96NJ5 620 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 WWP1Q9H0M0 922 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 C8orf4Q9NR00 106 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 FETUBQ9UGM5 382 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 SQORQ9Y6N5 450 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 LAMB4A4D0S4 1761 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 A0A0X1KG70 313 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 GSG1L2A8MUP6 293 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 CENPBD1B2RD01 187 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 STX16-NPEPL1H3BU86 382 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 ASNA1O43681 348 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 SORBS3O60504 671 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 SNX2O60749 519 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 TP53P04637 393 aaPredicted RBP9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 NCF2P19878 526 aaPredicted RBP9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 EEF1DP29692 281 aaKnown RBP9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 STAT1P42224 750 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 CASP4P49662 377 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 PRKAA2P54646 552 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 SEC23AQ15436 765 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 WDR78Q5VTH9 848 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 KCTD1Q719H9 257 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 PLPP6Q8IY26 295 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 TMEM35BQ8NCS4 154 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 LARP4BQ92615 738 aaKnown RBP9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 PAFAH2Q99487 392 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 ZSCAN5AQ9BUG6 496 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 VPS11Q9H270 941 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 KCNK4Q9NYG8 393 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 PCDHGA10Q9Y5H3 936 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 COL16A1Q07092 1604 aaPredicted RBP9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 NFAT5O94916 1531 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 ZW10O43264 779 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 PRLP01236 227 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 FTLP02792 175 aaPredicted RBP9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 POLR2CP19387 275 aaPredicted RBP9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 TNFAIP3P21580 790 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 TRAPPC10P48553 1259 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 B2MP61769 119 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 DGKDQ16760 1214 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 TRIM71Q2Q1W2 868 aaKnown RBP9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 MGAT5BQ3V5L5 792 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 CARM1Q86X55 608 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 DCP2Q8IU60 420 aaKnown RBP9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 OFCC1Q8IZS5 231 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 LGI2Q8N0V4 545 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 SIX6OS1Q8N1H7 587 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 ZFP90Q8TF47 636 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 ATL1Q8WXF7 558 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 LRRC59Q96AG4 307 aaKnown RBP9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 PNMA5Q96PV4 448 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 LRRC19Q9H756 370 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 CNNM2Q9H8M5 875 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 C12orf10Q9HB07 376 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 BMP2KQ9NSY1 1161 aaPredicted RBP9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 MAU2Q9Y6X3 613 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 NID2Q14112 1375 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 AHDC1Q5TGY3 1603 aaPredicted RBP9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 I3L4J1 428 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 AIM2O14862 343 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 FAM155BO75949 473 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 CLPXO76031 633 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 SPNP16150 400 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 ZNF26P17031 533 aaPredicted RBP9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 CKMT2P17540 419 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 SERPINB1P30740 379 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 HOXC9P31274 260 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 GNL1P36915 607 aaPredicted RBP9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 SERPINB5P36952 375 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 SEPHS1P49903 392 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 JAM2P57087 298 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 MS4A2Q01362 244 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 CREB5Q02930 508 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 DRAP1Q14919 205 aaPredicted RBP9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 SF3B3Q15393 1217 aaKnown RBP9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 CAVIN4Q5BKX8 364 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 FAM26FQ5R3K3 315 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 ZNF598Q86UK7 904 aaKnown RBP9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 HERC6Q8IVU3 1022 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 ABHD11Q8NFV4 315 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 TMEM246Q9BRR3 403 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 TMEM121Q9BTD3 319 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 CPVLQ9H3G5 476 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 RNPEPQ9H4A4 650 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 BCAS3Q9H6U6 928 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 CD209Q9NNX6 404 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 PNPLA3Q9NST1 481 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 KLHL11Q9NVR0 708 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 SERPINB13Q9UIV8 391 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 PHLPP1O60346 1717 aa9.92□□□□□ -0.82
PTCHD4-201ENST00000339488 A0A1W2PQ72 361 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms