RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 LRRC8AQ8IWT6 810 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 RHOT2Q8IXI1 618 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 RIN3Q8TB24 985 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 FNIP1Q8TF40 1166 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 FAM172AQ8WUF8 416 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 CENPIQ92674 756 aaPredicted RBP12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 EDAQ92838 391 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 SHDQ96IW2 340 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 PACSIN1Q9BY11 444 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 IRX2Q9BZI1 471 aaPredicted RBP12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 ECT2Q9H8V3 914 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 SPHK2Q9NRA0 654 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 PIGVQ9NUD9 493 aa12.37□□□□□ -0.43
SPTLC1-202ENST00000337841 MAN2B1O00754 1011 aa12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 ARHGAP6O43182 974 aa12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 MOCS2O96007 188 aaPredicted RBP12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 TFE3P19532 575 aaPredicted RBP12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 TNK2Q07912 1038 aa12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 DHCR24Q15392 516 aa12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 C15orf59Q2T9L4 293 aaPredicted RBP12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 MPPE1Q53F39 396 aa12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 SCYL2Q6P3W7 929 aa12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 C1orf228Q6PIY5 440 aa12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 RHBDF2Q6PJF5 856 aa12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 KIAA1328Q86T90 577 aa12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 TMEM139Q8IV31 216 aa12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 CPXM2Q8N436 756 aa12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 SLC35G2Q8TBE7 412 aa12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 ZNF564Q8TBZ8 553 aaPredicted RBP12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 ARHGEF26Q96DR7 871 aa12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 TMA16Q96EY4 203 aaKnown RBP12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 MSANTD3Q96H12 275 aa12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 TKTL2Q9H0I9 626 aa12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 HPS4Q9NQG7 708 aa12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 GTSE1Q9NYZ3 720 aa12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 ANAPC7Q9UJX3 599 aa12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 STOML2Q9UJZ1 356 aa12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 REV3LO60673 3130 aa12.36□□□□□ -0.43
SPTLC1-202ENST00000337841 PATJQ8NI35 1801 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 TNFRSF10AO00220 468 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 ARNTLO00327 626 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 CCP110O43303 1012 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 ADRA1BP35368 520 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 NOP2P46087 812 aaKnown RBP12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 OGDHQ02218 1023 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 PRKCQQ04759 706 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 TCEAL1Q15170 157 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 ANO4Q32M45 955 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 LY6G5CQ5SRR4 150 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 SH3PXD2AQ5TCZ1 1133 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 LRRC31Q6UY01 552 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 TPGS1Q6ZTW0 290 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 BNIPLQ7Z465 357 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 RALGPS2Q86X27 583 aaPredicted RBP12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 FAM131BQ86XD5 332 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 TMEM25Q86YD3 366 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 TTC8Q8TAM2 541 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 DDI1Q8WTU0 396 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 ASIC4Q96FT7 647 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 CALR3Q96L12 384 aaKnown RBP12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 C1orf74Q96LT6 269 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 XPO6Q96QU8 1125 aaKnown RBP12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 HAPLN3Q96S86 360 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 SIK2Q9H0K1 926 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 ARHGEF38Q9NXL2 777 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 DENND4AQ7Z401 1863 aa12.35□□□□□ -0.43
SPTLC1-202ENST00000337841 TCF20Q9UGU0 1960 aaKnown RBP12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 GOLGA6L7A0A1B0GV03 622 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 TYW5A2RUC4 315 aaKnown RBP12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 PI4K2BG5E9Z4 385 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 STK25O00506 426 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 TSPAN3O60637 253 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 PAGE1O75459 146 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 CYP17A1P05093 508 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 ADH5P11766 374 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 ARHGAP25P42331 645 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 ATXN1P54253 815 aaKnown RBP12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 AIF1P55008 147 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 HDAC4P56524 1084 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 SIGLEC14Q08ET2 396 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 KIF5AQ12840 1032 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 MLF2Q15773 248 aaPredicted RBP12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 PREPLQ4J6C6 727 aaPredicted RBP12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 OTUD1Q5VV17 481 aaPredicted RBP12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 TRIM67Q6ZTA4 783 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 SLFN11Q7Z7L1 901 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 CHSY1Q86X52 802 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 CCDC117Q8IWD4 279 aaPredicted RBP12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 FAM217AQ8IXS0 508 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 RFFLQ8WZ73 363 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 PDLIM2Q96JY6 352 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 NELL2Q99435 816 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 BBS2Q9BXC9 721 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 COL25A1Q9BXS0 654 aaPredicted RBP12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 HEBP1Q9NRV9 189 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 MARK1Q9P0L2 795 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 CALCOCO1Q9P1Z2 691 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 CA14Q9ULX7 337 aa12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 MRPS17Q9Y2R5 130 aaKnown RBP12.34□□□□□ -0.43
SPTLC1-202ENST00000337841 PIAS3Q9Y6X2 628 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms