RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 ZNF526Q8TF50 670 aaPredicted RBP18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 DDI1Q8WTU0 396 aa18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 FAF2Q96CS3 445 aa18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 PRPF18Q99633 342 aaKnown RBP18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 NTPCRQ9BSD7 190 aaKnown RBP18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 TBC1D22BQ9NU19 505 aa18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 TESPA1A2RU30 521 aaPredicted RBP18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 FAM189A1O60320 539 aa18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 LRCH4O75427 683 aa18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 IDH3AP50213 366 aa18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 ROR1Q01973 937 aa18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 MAP1SQ66K74 1059 aaPredicted RBP18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 PDPK2PQ6A1A2 396 aa18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 PAOXQ6QHF9 649 aa18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 FASTKD5Q7L8L6 764 aaKnown RBP18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 ADGRF2Q8IZF7 708 aa18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 PHF12Q96QT6 1004 aa18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 KCNK16Q96T55 309 aa18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 DHX33Q9H6R0 707 aaKnown RBP18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 ANKEF1Q9NU02 776 aa18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 DNAJC28Q9NX36 388 aa18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 MYH9P35579 1960 aaKnown RBP18.67■□□□□ 0.58
CLSTN3-202ENST00000331148 HMX2A2RU54 273 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 TRDMT1O14717 391 aaKnown RBP18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 STAM2O75886 525 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 FBXO21O94952 628 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 GSRP00390 522 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 SLC1A6P48664 564 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 HDAC4P56524 1084 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 TMEM62Q0P6H9 643 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 CBX3Q13185 183 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 RARS2Q5T160 578 aaKnown RBP18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 C1QTNF12Q5T7M4 302 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 MROH9Q5TGP6 573 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 WDR78Q5VTH9 848 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 KLHL35Q6PF15 583 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 SPATA18Q8TC71 538 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 GFM2Q969S9 779 aaKnown RBP18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 THEGQ9P2T0 379 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 ZMPSTE24O75844 475 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 FGF3P11487 239 aaPredicted RBP18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 CDH2P19022 906 aaPredicted RBP18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 ACAT1P24752 427 aaKnown RBP18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 NR1H2P55055 460 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 NLRP11P59045 1033 aaKnown RBP18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 RPL10AP62906 217 aaKnown RBP18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 CBLBQ13191 982 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 LPIN1Q14693 890 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 FAM182AQ5T1J6 154 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 IYDQ6PHW0 289 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 DARS2Q6PI48 645 aaKnown RBP18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 TAS1R3Q7RTX0 852 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 RIOX2Q8IUF8 465 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 TMEM35BQ8NCS4 154 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 SLC10A4Q96EP9 437 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 IFT122Q9HBG6 1241 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 ARHGAP28Q9P2N2 729 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 CEPT1Q9Y6K0 416 aa18.66■□□□□ 0.58
CLSTN3-202ENST00000331148 LOC100653049A0A140TA62 436 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 KRT34O76011 436 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 FAM58BPP0C7Q3 252 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 COG7P83436 770 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 PLOD1Q02809 727 aaPredicted RBP18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 CREB5Q02930 508 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 PPIDQ08752 370 aaKnown RBP18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 HADHQ16836 314 aaKnown RBP18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 ZBTB8BQ8NAP8 495 aaPredicted RBP18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 FNDC8Q8TC99 324 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 PRPF31Q8WWY3 499 aaKnown RBP18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 ZNF408Q9H9D4 720 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 FBXO40Q9UH90 709 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 SH3GLB1Q9Y371 365 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 H3BSA7 217 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 MAFGO15525 162 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 PEX10O60683 326 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 APOEP02649 317 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 MYL4P12829 197 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 OSBPP22059 807 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 RFC1P35251 1148 aaPredicted RBP18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 GABRB2P47870 512 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 ACOT2P49753 483 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 ADGRE1Q14246 886 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 NPNTQ6UXI9 565 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 TRIM67Q6ZTA4 783 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 PHTF2Q8N3S3 785 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 UBR7Q8N806 425 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 GPRASP2Q96D09 838 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 HSPBAP1Q96EW2 488 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 SPATC1LQ9H0A9 340 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 RAB6BQ9NRW1 208 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 ARHGAP26Q9UNA1 814 aa18.65■□□□□ 0.58
CLSTN3-202ENST00000331148 UNCXA6NJT0 531 aa18.64■□□□□ 0.57
CLSTN3-202ENST00000331148 TICAM1Q8IUC6 712 aa18.64■□□□□ 0.57
CLSTN3-202ENST00000331148 RNF168Q8IYW5 571 aaPredicted RBP18.64■□□□□ 0.57
CLSTN3-202ENST00000331148 KCTD6Q8NC69 237 aa18.64■□□□□ 0.57
CLSTN3-202ENST00000331148 JOSD2Q8TAC2 188 aa18.64■□□□□ 0.57
CLSTN3-202ENST00000331148 LRGUKQ96M69 825 aa18.64■□□□□ 0.57
CLSTN3-202ENST00000331148 PNPOQ9NVS9 261 aa18.64■□□□□ 0.57
CLSTN3-202ENST00000331148 AK5Q9Y6K8 562 aa18.64■□□□□ 0.57
CLSTN3-202ENST00000331148 A0A0G2JMZ2 1700 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms