RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 KCNT2Q6UVM3 1135 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 SLC26A9Q7LBE3 791 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 ADGRG6Q86SQ4 1221 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 SCUBE3Q8IX30 993 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 LRRN4Q8WUT4 740 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 DEPDC1BQ8WUY9 529 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 COPS5Q92905 334 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 CPB2Q96IY4 423 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 CLPTM1LQ96KA5 538 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 OLFM3Q96PB7 478 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 EBF4Q9BQW3 602 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 FDXACB1Q9BRP7 624 aaPredicted RBP8.98□□□□□ -0.97
CLK1-201ENST00000321356 DTLQ9NZJ0 730 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 DLGAP2Q9P1A6 1054 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 NME7Q9Y5B8 376 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 USP3Q9Y6I4 520 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 POLR2AP24928 1970 aaKnown RBP8.98□□□□□ -0.97
CLK1-201ENST00000321356 A0A088AWK7 358 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 MAGEA13PA6NCF6 341 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 KIF3CO14782 793 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 PLIN3O60664 434 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 GLRA3O75311 464 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 DGKIO75912 1065 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 SLC25A27O95847 323 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 PGK2P07205 417 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 INSRRP14616 1297 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 ALOX15P16050 662 aaPredicted RBP8.98□□□□□ -0.97
CLK1-201ENST00000321356 DESP17661 470 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 ADORA2AP29274 412 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 PEX19P40855 299 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 RPL34P49207 117 aaKnown RBP8.98□□□□□ -0.97
CLK1-201ENST00000321356 ALDH18A1P54886 795 aaKnown RBP8.98□□□□□ -0.97
CLK1-201ENST00000321356 UBAP2LQ14157 1087 aaKnown RBP8.98□□□□□ -0.97
CLK1-201ENST00000321356 MDH1BQ5I0G3 518 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 C6orf163Q5TEZ5 329 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 NCBP2-AS2Q69YL0 99 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 ZCCHC23Q6ZST2 131 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 PAXIP1Q6ZW49 1069 aaPredicted RBP8.98□□□□□ -0.97
CLK1-201ENST00000321356 FBXO16Q8IX29 292 aaPredicted RBP8.98□□□□□ -0.97
CLK1-201ENST00000321356 PIWIL2Q8TC59 973 aaKnown RBP8.98□□□□□ -0.97
CLK1-201ENST00000321356 CSPG4P5Q96PW8 444 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 NR1H4Q96RI1 486 aaPredicted RBP8.98□□□□□ -0.97
CLK1-201ENST00000321356 KCTD15Q96SI1 283 aaPredicted RBP8.98□□□□□ -0.97
CLK1-201ENST00000321356 LBHD1Q9BQE6 289 aaPredicted RBP8.98□□□□□ -0.97
CLK1-201ENST00000321356 THTPAQ9BU02 230 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 B3GNT5Q9BYG0 378 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 EIF2B3Q9NR50 452 aaKnown RBP8.98□□□□□ -0.97
CLK1-201ENST00000321356 ERAP1Q9NZ08 941 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 MORF4L1Q9UBU8 362 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 SCOCQ9UIL1 159 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 SOX13Q9UN79 622 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 AP4E1Q9UPM8 1137 aa8.98□□□□□ -0.97
CLK1-201ENST00000321356 A0A0A0MRY4 1105 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 A6NJR5 290 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 HACD1B0YJ81 288 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 ITM2AO43736 263 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 TSPAN1O60635 241 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 FKBP6O75344 327 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 PRKCGP05129 697 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 C6orf222P0C671 652 aaPredicted RBP8.97□□□□□ -0.97
CLK1-201ENST00000321356 TXNP10599 105 aaKnown RBP8.97□□□□□ -0.97
CLK1-201ENST00000321356 MYL4P12829 197 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 VAV1P15498 845 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 CRABP2P29373 138 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 FDFT1P37268 417 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 SNX16P57768 344 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 AP2B1P63010 937 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 SARNPP82979 210 aaKnown RBP8.97□□□□□ -0.97
CLK1-201ENST00000321356 BTKQ06187 659 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 PDE1CQ14123 709 aaPredicted RBP8.97□□□□□ -0.97
CLK1-201ENST00000321356 PCLAFQ15004 111 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 N4BP2L1Q5TBK1 243 aaPredicted RBP8.97□□□□□ -0.97
CLK1-201ENST00000321356 ARHGAP17Q68EM7 881 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 HEATR6Q6AI08 1181 aaKnown RBP8.97□□□□□ -0.97
CLK1-201ENST00000321356 LRRC8BQ6P9F7 803 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 AAGABQ6PD74 315 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 PACS1Q6VY07 963 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 ACOT1Q86TX2 421 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 CCNJLQ8IV13 435 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 WDR75Q8IWA0 830 aaKnown RBP8.97□□□□□ -0.97
CLK1-201ENST00000321356 HACE1Q8IYU2 909 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 UNC5BQ8IZJ1 945 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 HTR3CQ8WXA8 447 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 ARNTL2Q8WYA1 636 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 SPATA13Q96N96 652 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 RILPQ96NA2 401 aa8.97□□□□□ -0.97
CLK1-201ENST00000321356 MRPL45Q9BRJ2 306 aaKnown RBP8.97□□□□□ -0.97
CLK1-201ENST00000321356 DHX35Q9H5Z1 703 aaKnown RBP8.97□□□□□ -0.97
CLK1-201ENST00000321356 SPATS2LQ9NUQ6 558 aaKnown RBP8.97□□□□□ -0.97
CLK1-201ENST00000321356 SRCAPQ6ZRS2 3230 aa8.96□□□□□ -0.97
CLK1-201ENST00000321356 MYO18AQ92614 2054 aaKnown RBP8.96□□□□□ -0.97
CLK1-201ENST00000321356 A0A0G2JLL6 359 aaPredicted RBP8.96□□□□□ -0.97
CLK1-201ENST00000321356 WDR27A2RRH5 827 aa8.96□□□□□ -0.97
CLK1-201ENST00000321356 ZNF195O14628 629 aa8.96□□□□□ -0.97
CLK1-201ENST00000321356 TPP1O14773 563 aa8.96□□□□□ -0.97
CLK1-201ENST00000321356 BUD23O43709 281 aaKnown RBP8.96□□□□□ -0.97
CLK1-201ENST00000321356 CCNT2O60583 730 aaKnown RBP8.96□□□□□ -0.97
CLK1-201ENST00000321356 LYPLA1O75608 230 aaPredicted RBP8.96□□□□□ -0.97
CLK1-201ENST00000321356 KLHL2O95198 593 aa8.96□□□□□ -0.97
CLK1-201ENST00000321356 PROCP04070 461 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms