RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 ARHGEF6Q15052 776 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 DUSP28Q4G0W2 176 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 IQSEC1Q6DN90 963 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 LRRC6Q86X45 466 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 TMEM126BQ8IUX1 230 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 RASGRP3Q8IV61 690 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 CCDC50Q8IVM0 306 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 ACTRT2Q8TDY3 377 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 KCTD13Q8WZ19 329 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 CASS4Q9NQ75 786 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 KCNK4Q9NYG8 393 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.11□□□□□ -1.11
CNOT4-201ENST00000315544 PRUNE2Q8WUY3 3088 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 F2P00734 622 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 KCNE1P15382 129 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 SP100P23497 879 aaPredicted RBP8.11□□□□□ -1.11
CNOT4-201ENST00000315544 PAX7P23759 505 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 ATICP31939 592 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 CACNA2D1P54289 1103 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 ARL4CP56559 192 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 ACVR1Q04771 509 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 MTERF2Q49AM1 385 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 SLC26A9Q7LBE3 791 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 PSTKQ8IV42 348 aaKnown RBP8.11□□□□□ -1.11
CNOT4-201ENST00000315544 PPM1KQ8N3J5 372 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 NPWQ8N729 165 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 GRK7Q8WTQ7 553 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 TMEM40Q8WWA1 233 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 LRRC39Q96DD0 335 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 EBF4Q9BQW3 602 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 ACAD9Q9H845 621 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 BATF3Q9NR55 127 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 TREX1Q9NSU2 369 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 GGT7Q9UJ14 662 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 HCRTO43612 131 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 BEST1O76090 585 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 FAM163BP0C2L3 166 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 DNAJB1P25685 340 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 IFNAR2P48551 515 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 SEZ6Q53EL9 994 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 PIGGQ5H8A4 983 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 C6orf10Q5SRN2 563 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 ALG1LQ6GMV1 187 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 MICALCLQ6ZW33 695 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 UNC5BQ8IZJ1 945 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 FBXO36Q8NEA4 188 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 CLEC4CQ8WTT0 213 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 KCTD15Q96SI1 283 aaPredicted RBP8.11□□□□□ -1.11
CNOT4-201ENST00000315544 TRABDQ9H4I3 376 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 DNAJC28Q9NX36 388 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 PCDHA11Q9Y5I1 949 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 SQORQ9Y6N5 450 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 VNN2O95498 520 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 ZNF26P17031 533 aaPredicted RBP8.1□□□□□ -1.11
CNOT4-201ENST00000315544 KRT4P19013 534 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 MTTPP55157 894 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 PITX1P78337 314 aaPredicted RBP8.1□□□□□ -1.11
CNOT4-201ENST00000315544 JADE1Q6IE81 842 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 ALYREFQ86V81 257 aaKnown RBP8.1□□□□□ -1.11
CNOT4-201ENST00000315544 CENPLQ8N0S6 344 aaPredicted RBP8.1□□□□□ -1.11
CNOT4-201ENST00000315544 PPTC7Q8NI37 304 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 FBLIM1Q8WUP2 373 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 RBM41Q96IZ5 413 aaKnown RBP8.1□□□□□ -1.11
CNOT4-201ENST00000315544 PPP1R10Q96QC0 940 aaKnown RBP8.1□□□□□ -1.11
CNOT4-201ENST00000315544 NOL6Q9H6R4 1146 aaKnown RBP8.1□□□□□ -1.11
CNOT4-201ENST00000315544 RCOR3Q9P2K3 495 aaPredicted RBP8.1□□□□□ -1.11
CNOT4-201ENST00000315544 ANAPC5Q9UJX4 755 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 MYO18AQ92614 2054 aaKnown RBP8.1□□□□□ -1.11
CNOT4-201ENST00000315544 CYB561D2O14569 222 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 PPP1R12AO14974 1030 aaPredicted RBP8.1□□□□□ -1.11
CNOT4-201ENST00000315544 TGM2P21980 687 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 PRPF38BQ5VTL8 546 aaKnown RBP8.1□□□□□ -1.11
CNOT4-201ENST00000315544 DCLRE1AQ6PJP8 1040 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 SMG8Q8ND04 991 aaKnown RBP8.1□□□□□ -1.11
CNOT4-201ENST00000315544 MAIP1Q8WWC4 291 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 TTC17Q96AE7 1141 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 TSGA13Q96PP4 275 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 C11orf70Q9BRQ4 267 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 TRIM31Q9BZY9 425 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 STN1Q9H668 368 aaKnown RBP8.1□□□□□ -1.11
CNOT4-201ENST00000315544 CYP3A43Q9HB55 503 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 CDHR5Q9HBB8 845 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 PCMTD2Q9NV79 361 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 WASF2Q9Y6W5 498 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 FANCMQ8IYD8 2048 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 LACTBL1A8MY62 500 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 IPO7O95373 1038 aaKnown RBP8.1□□□□□ -1.11
CNOT4-201ENST00000315544 LDHAP00338 332 aaKnown RBP8.1□□□□□ -1.11
CNOT4-201ENST00000315544 JUNP05412 331 aaKnown RBP8.1□□□□□ -1.11
CNOT4-201ENST00000315544 TARSP26639 723 aaKnown RBP8.1□□□□□ -1.11
CNOT4-201ENST00000315544 GMPRP36959 345 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 GRM5P41594 1212 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 PGFP49763 221 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 SUOXP51687 545 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 CYP4A22Q5TCH4 519 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 ARMC3Q5W041 872 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 SLFN12LQ6IEE8 588 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 BEND5Q7L4P6 421 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 ARHGAP12Q8IWW6 846 aa8.1□□□□□ -1.11
CNOT4-201ENST00000315544 BBOF1Q8ND07 529 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms