RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 CROCCP2Q86T23 111 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 CPT1BQ92523 772 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 PWWP2AQ96N64 755 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 RBM15Q96T37 977 aaKnown RBP eCLIP17.31■□□□□ 0.36
CLCF1-201ENST00000312438 OSBPL2Q9H1P3 480 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 NMUR1Q9HB89 426 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 ARHGEF38Q9NXL2 777 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 GOLGA6AQ9NYA3 693 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 OR12D3Q9UGF7 316 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 ADAM21Q9UKJ8 722 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 CDY1Q9Y6F8 540 aa17.31■□□□□ 0.36
CLCF1-201ENST00000312438 TANC1Q9C0D5 1861 aa17.3■□□□□ 0.36
CLCF1-201ENST00000312438 FAM72CH0Y354 149 aa17.3■□□□□ 0.36
CLCF1-201ENST00000312438 MAP3K6O95382 1288 aa17.3■□□□□ 0.36
CLCF1-201ENST00000312438 CCR1P32246 355 aa17.3■□□□□ 0.36
CLCF1-201ENST00000312438 PGFP49763 221 aa17.3■□□□□ 0.36
CLCF1-201ENST00000312438 TPI1P60174 286 aa17.3■□□□□ 0.36
CLCF1-201ENST00000312438 TTMPQ5BVD1 217 aa17.3■□□□□ 0.36
CLCF1-201ENST00000312438 FAM72AQ5TYM5 149 aa17.3■□□□□ 0.36
CLCF1-201ENST00000312438 FAM72DQ6L9T8 149 aa17.3■□□□□ 0.36
CLCF1-201ENST00000312438 FAM72BQ86X60 149 aa17.3■□□□□ 0.36
CLCF1-201ENST00000312438 TTC9BQ8N6N2 239 aa17.3■□□□□ 0.36
CLCF1-201ENST00000312438 NAT8LQ8N9F0 302 aa17.3■□□□□ 0.36
CLCF1-201ENST00000312438 TFB1MQ8WVM0 346 aaKnown RBP17.3■□□□□ 0.36
CLCF1-201ENST00000312438 PRCCQ92733 491 aaPredicted RBP17.3■□□□□ 0.36
CLCF1-201ENST00000312438 ZNF558Q96NG5 402 aa17.3■□□□□ 0.36
CLCF1-201ENST00000312438 OLFM3Q96PB7 478 aa17.3■□□□□ 0.36
CLCF1-201ENST00000312438 HAPLN3Q96S86 360 aa17.3■□□□□ 0.36
CLCF1-201ENST00000312438 SEPT5Q99719 369 aaPredicted RBP17.3■□□□□ 0.36
CLCF1-201ENST00000312438 EPAS1Q99814 870 aa17.3■□□□□ 0.36
CLCF1-201ENST00000312438 SCN5AQ14524 2016 aa17.29■□□□□ 0.36
CLCF1-201ENST00000312438 DCLK1O15075 740 aa17.29■□□□□ 0.36
CLCF1-201ENST00000312438 VNN2O95498 520 aa17.29■□□□□ 0.36
CLCF1-201ENST00000312438 ERCC2P18074 760 aa17.29■□□□□ 0.36
CLCF1-201ENST00000312438 USP46P62068 366 aa17.29■□□□□ 0.36
CLCF1-201ENST00000312438 DEFB103AP81534 67 aa17.29■□□□□ 0.36
CLCF1-201ENST00000312438 DUSP4Q13115 394 aa17.29■□□□□ 0.36
CLCF1-201ENST00000312438 PSMD5Q16401 504 aa17.29■□□□□ 0.36
CLCF1-201ENST00000312438 CASP10Q92851 521 aa17.29■□□□□ 0.36
CLCF1-201ENST00000312438 ATP6V1G3Q96LB4 118 aa17.29■□□□□ 0.36
CLCF1-201ENST00000312438 CEP295NLQ96MC4 621 aa17.29■□□□□ 0.36
CLCF1-201ENST00000312438 SERPINB11Q96P15 392 aa17.29■□□□□ 0.36
CLCF1-201ENST00000312438 QKIQ96PU8 341 aaKnown RBP eCLIP17.29■□□□□ 0.36
CLCF1-201ENST00000312438 TMEM109Q9BVC6 243 aa17.29■□□□□ 0.36
CLCF1-201ENST00000312438 DNAJC17Q9NVM6 304 aaKnown RBP17.29■□□□□ 0.36
CLCF1-201ENST00000312438 SFMBT1Q9UHJ3 866 aa17.29■□□□□ 0.36
CLCF1-201ENST00000312438 RAD54BQ9Y620 910 aa17.29■□□□□ 0.36
CLCF1-201ENST00000312438 HMGB1P1B2RPK0 211 aaPredicted RBP17.28■□□□□ 0.36
CLCF1-201ENST00000312438 BAIAP3O94812 1187 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 SOD2P04179 222 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 SHBGP04278 402 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 MAGEA4P43358 317 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 TUFMP49411 452 aaKnown RBP17.28■□□□□ 0.36
CLCF1-201ENST00000312438 PSEN1P49768 467 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 GYS2P54840 703 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 WDR5P61964 334 aaKnown RBP17.28■□□□□ 0.36
CLCF1-201ENST00000312438 BASP1P80723 227 aaKnown RBP17.28■□□□□ 0.36
CLCF1-201ENST00000312438 BTG3Q14201 252 aaPredicted RBP17.28■□□□□ 0.36
CLCF1-201ENST00000312438 PPP2R5DQ14738 602 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 PDK1Q15118 436 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 KYNUQ16719 465 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 FAM117BQ6P1L5 589 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 CENPUQ71F23 418 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 CMTR2Q8IYT2 770 aaKnown RBP17.28■□□□□ 0.36
CLCF1-201ENST00000312438 FAM76AQ8TAV0 307 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 FBXO32Q969P5 355 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 FERMT1Q9BQL6 677 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 VN1R3Q9BXE9 311 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 PHACTR1Q9C0D0 580 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 CRISPLD1Q9H336 500 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 RC3H2Q9HBD1 1191 aaKnown RBP17.28■□□□□ 0.36
CLCF1-201ENST00000312438 OSER1Q9NX31 292 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 CLIC5Q9NZA1 410 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 C5orf60A6NFR6 353 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 ALOX15BO15296 676 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 GCATO75600 419 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 ZNF189O75820 626 aaPredicted RBP17.28■□□□□ 0.36
CLCF1-201ENST00000312438 SOAT2O75908 522 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 LAG3P18627 525 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 OR1D2P34982 312 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 NRLP54845 237 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 KRT71Q3SY84 523 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 HEATR6Q6AI08 1181 aaKnown RBP17.28■□□□□ 0.36
CLCF1-201ENST00000312438 MSANTD2Q6P1R3 559 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 SLC39A11Q8N1S5 342 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 STKLD1Q8NE28 680 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 GPR152Q8TDT2 470 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 TMEM169Q96HH4 297 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 ROPN1BQ9BZX4 212 aaPredicted RBP17.28■□□□□ 0.36
CLCF1-201ENST00000312438 ROPN1Q9HAT0 212 aaPredicted RBP17.28■□□□□ 0.36
CLCF1-201ENST00000312438 TLR8Q9NR97 1041 aaKnown RBP17.28■□□□□ 0.36
CLCF1-201ENST00000312438 GMIPQ9P107 970 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 MFHAS1Q9Y4C4 1052 aa17.28■□□□□ 0.36
CLCF1-201ENST00000312438 WDR27A2RRH5 827 aa17.27■□□□□ 0.36
CLCF1-201ENST00000312438 NCAM2O15394 837 aa17.27■□□□□ 0.36
CLCF1-201ENST00000312438 MFSD11O43934 449 aa17.27■□□□□ 0.36
CLCF1-201ENST00000312438 ACRP10323 421 aa17.27■□□□□ 0.36
CLCF1-201ENST00000312438 ARL4CP56559 192 aa17.27■□□□□ 0.36
CLCF1-201ENST00000312438 AGBL2Q5U5Z8 902 aa17.27■□□□□ 0.36
CLCF1-201ENST00000312438 KCTD16Q68DU8 428 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms