RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 PYROXD1Q8WU10 500 aa21.98■■□□□ 1.11
ATG4D-201ENST00000309469 GPR62Q9BZJ7 368 aa21.98■■□□□ 1.11
ATG4D-201ENST00000309469 KLC2Q9H0B6 622 aa21.98■■□□□ 1.11
ATG4D-201ENST00000309469 VPS37BQ9H9H4 285 aa21.98■■□□□ 1.11
ATG4D-201ENST00000309469 ABCC13Q9NSE7 274 aa21.98■■□□□ 1.11
ATG4D-201ENST00000309469 COL4A4P53420 1690 aaPredicted RBP21.98■■□□□ 1.11
ATG4D-201ENST00000309469 E7EVH7 732 aa21.98■■□□□ 1.11
ATG4D-201ENST00000309469 DCLK1O15075 740 aa21.98■■□□□ 1.11
ATG4D-201ENST00000309469 CXCL10P02778 98 aa21.98■■□□□ 1.11
ATG4D-201ENST00000309469 LSP1P33241 339 aa21.98■■□□□ 1.11
ATG4D-201ENST00000309469 MMP13P45452 471 aa21.98■■□□□ 1.11
ATG4D-201ENST00000309469 HEATR6Q6AI08 1181 aaKnown RBP21.98■■□□□ 1.11
ATG4D-201ENST00000309469 VSTM1Q6UX27 236 aa21.98■■□□□ 1.11
ATG4D-201ENST00000309469 PPP1R21Q6ZMI0 780 aa21.98■■□□□ 1.11
ATG4D-201ENST00000309469 TKTL2Q9H0I9 626 aa21.98■■□□□ 1.11
ATG4D-201ENST00000309469 MARCH5Q9NX47 278 aa21.98■■□□□ 1.11
ATG4D-201ENST00000309469 NLRC5Q86WI3 1866 aa21.97■■□□□ 1.11
ATG4D-201ENST00000309469 ATP5DP30049 168 aa21.97■■□□□ 1.11
ATG4D-201ENST00000309469 FAAP100Q0VG06 881 aa21.97■■□□□ 1.11
ATG4D-201ENST00000309469 BBS9Q3SYG4 887 aa21.97■■□□□ 1.11
ATG4D-201ENST00000309469 BTBD8Q5XKL5 378 aa21.97■■□□□ 1.11
ATG4D-201ENST00000309469 HTR3CQ8WXA8 447 aa21.97■■□□□ 1.11
ATG4D-201ENST00000309469 MRPL9Q9BYD2 267 aaKnown RBP21.97■■□□□ 1.11
ATG4D-201ENST00000309469 ETNK1Q9HBU6 452 aa21.97■■□□□ 1.11
ATG4D-201ENST00000309469 HCSTQ9UBK5 93 aa21.97■■□□□ 1.11
ATG4D-201ENST00000309469 CTNNAL1Q9UBT7 734 aa21.97■■□□□ 1.11
ATG4D-201ENST00000309469 LGALS13Q9UHV8 139 aa21.97■■□□□ 1.11
ATG4D-201ENST00000309469 PCDHB5Q9Y5E4 795 aa21.97■■□□□ 1.11
ATG4D-201ENST00000309469 OR6C75A6NL08 312 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 CDH16O75309 829 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 IGLV3-25P01717 112 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 ERCC2P18074 760 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 FGFR3P22607 806 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 MAGEA6P43360 314 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 GPX6P59796 221 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 TPI1P60174 286 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 PPARDQ03181 441 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 PDK1Q15118 436 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 ZNF280DQ6N043 979 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 TAOK1Q7L7X3 1001 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 SCD5Q86SK9 330 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 EXOC3L1Q86VI1 746 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 C8orf48Q96LL4 319 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 LGMNQ99538 433 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 TMEM175Q9BSA9 504 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 PPP1R12CQ9BZL4 782 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 EXOC1LA0A1B0GW35 172 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 TBKBP1A7MCY6 615 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 CLUHO75153 1309 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 PARNO95453 639 aaKnown RBP21.96■■□□□ 1.11
ATG4D-201ENST00000309469 VAV1P15498 845 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 ZNF135P52742 658 aaPredicted RBP21.96■■□□□ 1.11
ATG4D-201ENST00000309469 CBLBQ13191 982 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 EIF4EBP2Q13542 120 aaPredicted RBP21.96■■□□□ 1.11
ATG4D-201ENST00000309469 PRKD1Q15139 912 aaPredicted RBP21.96■■□□□ 1.11
ATG4D-201ENST00000309469 CCDC38Q502W7 563 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 SYCP2LQ5T4T6 812 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 FAXCQ5TGI0 409 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 CAPN12Q6ZSI9 719 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 ATP11CQ8NB49 1132 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 FBXO36Q8NEA4 188 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 ARHGEF2Q92974 986 aaKnown RBP21.96■■□□□ 1.11
ATG4D-201ENST00000309469 RNF34Q969K3 372 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 B3GALT6Q96L58 329 aa21.96■■□□□ 1.11
ATG4D-201ENST00000309469 WDR83Q9BRX9 315 aaKnown RBP21.96■■□□□ 1.11
ATG4D-201ENST00000309469 FRMD8Q9BZ67 464 aaPredicted RBP21.96■■□□□ 1.11
ATG4D-201ENST00000309469 TRIM66O15016 1216 aa21.95■■□□□ 1.1
ATG4D-201ENST00000309469 METTL18O95568 372 aa21.95■■□□□ 1.1
ATG4D-201ENST00000309469 GALTP07902 379 aa21.95■■□□□ 1.1
ATG4D-201ENST00000309469 MAGEA11P43364 429 aa21.95■■□□□ 1.1
ATG4D-201ENST00000309469 PGFP49763 221 aa21.95■■□□□ 1.1
ATG4D-201ENST00000309469 TLE2Q04725 743 aa21.95■■□□□ 1.1
ATG4D-201ENST00000309469 DDR2Q16832 855 aa21.95■■□□□ 1.1
ATG4D-201ENST00000309469 FUT10Q6P4F1 479 aa21.95■■□□□ 1.1
ATG4D-201ENST00000309469 PDZD4Q76G19 769 aaPredicted RBP21.95■■□□□ 1.1
ATG4D-201ENST00000309469 VPS52Q8N1B4 723 aa21.95■■□□□ 1.1
ATG4D-201ENST00000309469 NUP93Q8N1F7 819 aa21.95■■□□□ 1.1
ATG4D-201ENST00000309469 MDM1Q8TC05 714 aa21.95■■□□□ 1.1
ATG4D-201ENST00000309469 PGLYRP2Q96PD5 576 aa21.95■■□□□ 1.1
ATG4D-201ENST00000309469 SELENOSQ9BQE4 189 aa21.95■■□□□ 1.1
ATG4D-201ENST00000309469 EURLQ9NYK6 297 aa21.95■■□□□ 1.1
ATG4D-201ENST00000309469 OR12D3Q9UGF7 316 aa21.95■■□□□ 1.1
ATG4D-201ENST00000309469 PTPRDP23468 1912 aa21.94■■□□□ 1.1
ATG4D-201ENST00000309469 TSHRP16473 764 aa21.94■■□□□ 1.1
ATG4D-201ENST00000309469 CYP2C18P33260 490 aa21.94■■□□□ 1.1
ATG4D-201ENST00000309469 PHBP35232 272 aa21.94■■□□□ 1.1
ATG4D-201ENST00000309469 MNX1P50219 401 aaPredicted RBP21.94■■□□□ 1.1
ATG4D-201ENST00000309469 MTM1Q13496 603 aa21.94■■□□□ 1.1
ATG4D-201ENST00000309469 SDHAF4Q5VUM1 108 aa21.94■■□□□ 1.1
ATG4D-201ENST00000309469 ARHGEF18Q6ZSZ5 1173 aa21.94■■□□□ 1.1
ATG4D-201ENST00000309469 PALM2Q8IXS6 379 aa21.94■■□□□ 1.1
ATG4D-201ENST00000309469 CYP4X1Q8N118 509 aa21.94■■□□□ 1.1
ATG4D-201ENST00000309469 RIBC1Q8N443 379 aaPredicted RBP21.94■■□□□ 1.1
ATG4D-201ENST00000309469 NETO2Q8NC67 525 aa21.94■■□□□ 1.1
ATG4D-201ENST00000309469 TOX2Q96NM4 488 aa21.94■■□□□ 1.1
ATG4D-201ENST00000309469 EPAS1Q99814 870 aa21.94■■□□□ 1.1
ATG4D-201ENST00000309469 SCML2Q9UQR0 700 aa21.94■■□□□ 1.1
ATG4D-201ENST00000309469 SNX10Q9Y5X0 201 aa21.94■■□□□ 1.1
ATG4D-201ENST00000309469 NR2E3Q9Y5X4 410 aa21.94■■□□□ 1.1
ATG4D-201ENST00000309469 PPP1R12AO14974 1030 aaPredicted RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms