RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 SLC12A1Q13621 1099 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 FLOT2Q14254 428 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 PRPSAP1Q14558 356 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 RPS6KA2Q15349 733 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 RARS2Q5T160 578 aaKnown RBP13.05□□□□□ -0.32
RETREG3-201ENST00000309428 EMC10Q5UCC4 262 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 ULK2Q8IYT8 1036 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 RYBPQ8N488 228 aaPredicted RBP13.05□□□□□ -0.32
RETREG3-201ENST00000309428 DIS3LQ8TF46 1054 aaKnown RBP13.05□□□□□ -0.32
RETREG3-201ENST00000309428 ZNF333Q96JL9 665 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 ZFP42Q96MM3 310 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 LGMNQ99538 433 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 NT5C1AQ9BXI3 368 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 SEMA6AQ9H2E6 1030 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 CDHR5Q9HBB8 845 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 ASNSD1Q9NWL6 643 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 CHCHD3Q9NX63 227 aaKnown RBP13.05□□□□□ -0.32
RETREG3-201ENST00000309428 CCL15-CCL14A0A0B4J2E2 113 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 ACKR2O00590 384 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 FESP07332 822 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 SLC12A2P55011 1212 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 USP46P62068 366 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 IL1RL1Q01638 556 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 CCL15Q16663 113 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 PLEKHA7Q6IQ23 1121 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 PMF1Q6P1K2 205 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 IGDCC3Q8IVU1 814 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 GALNT15Q8N3T1 639 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 TTC13Q8NBP0 860 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 RDM1Q8NG50 284 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 FAM81AQ8TBF8 368 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 RBPJLQ9UBG7 517 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 NDC80O14777 642 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 HOXC6P09630 235 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 GPD1P21695 349 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 TPP2P29144 1249 aaPredicted RBP13.05□□□□□ -0.32
RETREG3-201ENST00000309428 ITGA9Q13797 1035 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 CELF3Q5SZQ8 465 aaKnown RBP13.05□□□□□ -0.32
RETREG3-201ENST00000309428 KATNAL2Q8IYT4 538 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 PTPRN2Q92932 1015 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 FAM167AQ96KS9 214 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 MARK4Q96L34 752 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 ECSITQ9BQ95 431 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 EBF3Q9H4W6 596 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 LRRC4Q9HBW1 653 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 ETNK2Q9NVF9 386 aa13.05□□□□□ -0.32
RETREG3-201ENST00000309428 PMLP29590 882 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 TRMT5Q32P41 509 aaKnown RBP13.04□□□□□ -0.32
RETREG3-201ENST00000309428 RALGPS1Q5JS13 557 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 VWA5B1Q5TIE3 1220 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 C16orf87Q6PH81 154 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 PPP2R3CQ969Q6 453 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 KLHL4Q9C0H6 718 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 ATXN3LQ9H3M9 355 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 AVENQ9NQS1 362 aaPredicted RBP13.04□□□□□ -0.32
RETREG3-201ENST00000309428 TSR3Q9UJK0 312 aaKnown RBP13.04□□□□□ -0.32
RETREG3-201ENST00000309428 TLK1Q9UKI8 766 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 COL24A1Q17RW2 1714 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 RTN3O95197 1032 aaPredicted RBP13.04□□□□□ -0.32
RETREG3-201ENST00000309428 LMO2P25791 158 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 CDKN2BP42772 138 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 TBL3Q12788 808 aaKnown RBP13.04□□□□□ -0.32
RETREG3-201ENST00000309428 ACBD5Q5T8D3 534 aaPredicted RBP13.04□□□□□ -0.32
RETREG3-201ENST00000309428 RBM44Q6ZP01 1051 aaKnown RBP13.04□□□□□ -0.32
RETREG3-201ENST00000309428 SATL1Q86VE3 508 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 PNPLA1Q8N8W4 532 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 SLC2A14Q8TDB8 520 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 CELF6Q96J87 481 aaKnown RBP13.04□□□□□ -0.32
RETREG3-201ENST00000309428 COPS7BQ9H9Q2 264 aaPredicted RBP13.04□□□□□ -0.32
RETREG3-201ENST00000309428 SAR1AQ9NR31 198 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 PCDH10Q9P2E7 1040 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 EPS15L1Q9UBC2 864 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 SLC24A2Q9UI40 661 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 SNX10Q9Y5X0 201 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 MYOCOSA0A1B0GUC4 107 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 CYP2C9P11712 490 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 IVDP26440 423 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 SKIV2L2P42285 1042 aaKnown RBP13.04□□□□□ -0.32
RETREG3-201ENST00000309428 ASPAP45381 313 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 ZNF280AP59817 542 aaPredicted RBP13.04□□□□□ -0.32
RETREG3-201ENST00000309428 PID1Q7Z2X4 250 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 ZNF677Q86XU0 584 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 ANKRD13AQ8IZ07 590 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 KCTD17Q8N5Z5 321 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 C10orf82Q8WW14 230 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 CPT1BQ92523 772 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 LPPQ93052 612 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 THAP11Q96EK4 314 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 SERPINI1Q99574 410 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 SIX4Q9UIU6 781 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 STRIP2Q9ULQ0 834 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 SOX13Q9UN79 622 aa13.04□□□□□ -0.32
RETREG3-201ENST00000309428 HBP1O60381 514 aa13.03□□□□□ -0.32
RETREG3-201ENST00000309428 OR6B1O95007 311 aa13.03□□□□□ -0.32
RETREG3-201ENST00000309428 CYLC2Q14093 348 aaPredicted RBP13.03□□□□□ -0.32
RETREG3-201ENST00000309428 SLC10A6Q3KNW5 377 aa13.03□□□□□ -0.32
RETREG3-201ENST00000309428 MARK2Q7KZI7 788 aaKnown RBP13.03□□□□□ -0.32
RETREG3-201ENST00000309428 OR6Y1Q8NGX8 325 aa13.03□□□□□ -0.32
RETREG3-201ENST00000309428 SEC14L1Q92503 715 aa13.03□□□□□ -0.32
RETREG3-201ENST00000309428 SLC7A6OSQ96CW6 309 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms