RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 C10orf76Q5T2E6 689 aa23.2■■□□□ 1.3
HOXD4-201ENST00000306324 RAD9BQ6WBX8 426 aa23.2■■□□□ 1.3
HOXD4-201ENST00000306324 TPGS1Q6ZTW0 290 aa23.2■■□□□ 1.3
HOXD4-201ENST00000306324 ATP6V0D2Q8N8Y2 350 aa23.2■■□□□ 1.3
HOXD4-201ENST00000306324 FAM172AQ8WUF8 416 aa23.2■■□□□ 1.3
HOXD4-201ENST00000306324 CNPY3Q9BT09 278 aa23.2■■□□□ 1.3
HOXD4-201ENST00000306324 WDCPQ9H6R7 721 aa23.2■■□□□ 1.3
HOXD4-201ENST00000306324 SLC12A6Q9UHW9 1150 aa23.2■■□□□ 1.3
HOXD4-201ENST00000306324 PAXBP1Q9Y5B6 917 aa23.2■■□□□ 1.3
HOXD4-201ENST00000306324 PIAS3Q9Y6X2 628 aa23.2■■□□□ 1.3
HOXD4-201ENST00000306324 EIF3CLB5ME19 914 aaKnown RBP23.19■■□□□ 1.3
HOXD4-201ENST00000306324 ACSL4O60488 711 aa23.19■■□□□ 1.3
HOXD4-201ENST00000306324 LCA5LO95447 670 aa23.19■■□□□ 1.3
HOXD4-201ENST00000306324 TMEM253P0C7T8 217 aa23.19■■□□□ 1.3
HOXD4-201ENST00000306324 PSMA2P25787 234 aa23.19■■□□□ 1.3
HOXD4-201ENST00000306324 CHKAP35790 457 aa23.19■■□□□ 1.3
HOXD4-201ENST00000306324 MAGEA1P43355 309 aa23.19■■□□□ 1.3
HOXD4-201ENST00000306324 SOX9P48436 509 aa23.19■■□□□ 1.3
HOXD4-201ENST00000306324 CXCR3P49682 368 aa23.19■■□□□ 1.3
HOXD4-201ENST00000306324 SIGLEC14Q08ET2 396 aa23.19■■□□□ 1.3
HOXD4-201ENST00000306324 PPP2R5DQ14738 602 aa23.19■■□□□ 1.3
HOXD4-201ENST00000306324 RAB6CQ53S08 254 aa23.19■■□□□ 1.3
HOXD4-201ENST00000306324 LY6G5CQ5SRR4 150 aa23.19■■□□□ 1.3
HOXD4-201ENST00000306324 RHBDF2Q6PJF5 856 aa23.19■■□□□ 1.3
HOXD4-201ENST00000306324 STRADAQ7RTN6 431 aa23.19■■□□□ 1.3
HOXD4-201ENST00000306324 BNIPLQ7Z465 357 aa23.19■■□□□ 1.3
HOXD4-201ENST00000306324 SIX5Q8N196 739 aa23.19■■□□□ 1.3
HOXD4-201ENST00000306324 BTN2A3PQ96KV6 586 aa23.19■■□□□ 1.3
HOXD4-201ENST00000306324 EIF3CQ99613 913 aaKnown RBP23.19■■□□□ 1.3
HOXD4-201ENST00000306324 RAB6CQ9H0N0 254 aa23.19■■□□□ 1.3
HOXD4-201ENST00000306324 ARHGEF3Q9NR81 526 aa23.19■■□□□ 1.3
HOXD4-201ENST00000306324 SPHK2Q9NRA0 654 aa23.19■■□□□ 1.3
HOXD4-201ENST00000306324 CTTNBP2NLQ9P2B4 639 aa23.19■■□□□ 1.3
HOXD4-201ENST00000306324 XPO7Q9UIA9 1087 aaKnown RBP23.19■■□□□ 1.3
HOXD4-201ENST00000306324 CUL9Q8IWT3 2517 aa23.19■■□□□ 1.3
HOXD4-201ENST00000306324 PI4K2BG5E9Z4 385 aa23.18■■□□□ 1.3
HOXD4-201ENST00000306324 ENDOD1O94919 500 aa23.18■■□□□ 1.3
HOXD4-201ENST00000306324 LATS1O95835 1130 aa23.18■■□□□ 1.3
HOXD4-201ENST00000306324 ADH1CP00326 375 aa23.18■■□□□ 1.3
HOXD4-201ENST00000306324 MLF2Q15773 248 aaPredicted RBP23.18■■□□□ 1.3
HOXD4-201ENST00000306324 ANO4Q32M45 955 aa23.18■■□□□ 1.3
HOXD4-201ENST00000306324 ADGRF1Q5T601 910 aa23.18■■□□□ 1.3
HOXD4-201ENST00000306324 FAM131BQ86XD5 332 aa23.18■■□□□ 1.3
HOXD4-201ENST00000306324 TMEM25Q86YD3 366 aa23.18■■□□□ 1.3
HOXD4-201ENST00000306324 CENPIQ92674 756 aaPredicted RBP23.18■■□□□ 1.3
HOXD4-201ENST00000306324 BHMTQ93088 406 aa23.18■■□□□ 1.3
HOXD4-201ENST00000306324 AZIN2Q96A70 460 aa23.18■■□□□ 1.3
HOXD4-201ENST00000306324 TKTL2Q9H0I9 626 aa23.18■■□□□ 1.3
HOXD4-201ENST00000306324 LUC7LQ9NQ29 371 aaKnown RBP23.18■■□□□ 1.3
HOXD4-201ENST00000306324 ANAPC7Q9UJX3 599 aa23.18■■□□□ 1.3
HOXD4-201ENST00000306324 GOLGA6L7A0A1B0GV03 622 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 KCNU1A8MYU2 1149 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 TRDMT1O14717 391 aaKnown RBP23.17■■□□□ 1.3
HOXD4-201ENST00000306324 ADH5P11766 374 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 BRMS1LQ5PSV4 323 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 TPRG1Q6ZUI0 275 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 CPXM2Q8N436 756 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 ZNF564Q8TBZ8 553 aaPredicted RBP23.17■■□□□ 1.3
HOXD4-201ENST00000306324 FNIP1Q8TF40 1166 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 TMEM51Q9NW97 253 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 STOML2Q9UJZ1 356 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 PCDHA13Q9Y5I0 950 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 KRBA1A5PL33 1030 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 GJA4P35212 333 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 HDAC4P56524 1084 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 ZNF252P-AS1Q0IIN9 211 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 NADSYN1Q6IA69 706 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 RFWD3Q6PCD5 774 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 TRIM67Q6ZTA4 783 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 LRRC8AQ8IWT6 810 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 FAM217AQ8IXS0 508 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 BTBD6Q96KE9 485 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 DDX50Q9BQ39 737 aaKnown RBP23.17■■□□□ 1.3
HOXD4-201ENST00000306324 BBS2Q9BXC9 721 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 C8orf33Q9H7E9 229 aaPredicted RBP23.17■■□□□ 1.3
HOXD4-201ENST00000306324 ARHGEF38Q9NXL2 777 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 UVRAGQ9P2Y5 699 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 INTUQ9ULD6 942 aa23.17■■□□□ 1.3
HOXD4-201ENST00000306324 NEDD8-MDP1E9PL57 170 aa23.16■■□□□ 1.3
HOXD4-201ENST00000306324 SPECC1L-ADORA2AF8WAN1 911 aa23.16■■□□□ 1.3
HOXD4-201ENST00000306324 TSPAN3O60637 253 aa23.16■■□□□ 1.3
HOXD4-201ENST00000306324 SLC6A4P31645 630 aa23.16■■□□□ 1.3
HOXD4-201ENST00000306324 CTHP32929 405 aa23.16■■□□□ 1.3
HOXD4-201ENST00000306324 GAD2Q05329 585 aa23.16■■□□□ 1.3
HOXD4-201ENST00000306324 FAM133BQ5BKY9 247 aaKnown RBP23.16■■□□□ 1.3
HOXD4-201ENST00000306324 RAP1GAP2Q684P5 730 aa23.16■■□□□ 1.3
HOXD4-201ENST00000306324 SCYL2Q6P3W7 929 aa23.16■■□□□ 1.3
HOXD4-201ENST00000306324 TMPRSS4Q9NRS4 437 aa23.16■■□□□ 1.3
HOXD4-201ENST00000306324 KIAA1549LQ6ZVL6 1849 aa23.15■■□□□ 1.3
HOXD4-201ENST00000306324 PAGE1O75459 146 aa23.15■■□□□ 1.3
HOXD4-201ENST00000306324 RNF8O76064 485 aa23.15■■□□□ 1.3
HOXD4-201ENST00000306324 CYBBP04839 570 aa23.15■■□□□ 1.3
HOXD4-201ENST00000306324 CD72P21854 359 aa23.15■■□□□ 1.3
HOXD4-201ENST00000306324 AMPD2Q01433 879 aa23.15■■□□□ 1.3
HOXD4-201ENST00000306324 PRKCQQ04759 706 aa23.15■■□□□ 1.3
HOXD4-201ENST00000306324 RALGPS2Q86X27 583 aaPredicted RBP23.15■■□□□ 1.3
HOXD4-201ENST00000306324 CHSY1Q86X52 802 aa23.15■■□□□ 1.3
HOXD4-201ENST00000306324 ACRBPQ8NEB7 543 aa23.15■■□□□ 1.3
HOXD4-201ENST00000306324 CCDC112Q8NEF3 446 aa23.15■■□□□ 1.3
HOXD4-201ENST00000306324 SLC35G2Q8TBE7 412 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms