RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 RNASEH1O60930 286 aaKnown RBP13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 USP17L7P0C7H9 530 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 CDC25CP30307 473 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 TUBP50607 506 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 CRADDP78560 199 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ZBTB49Q6ZSB9 765 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 HDAC7Q8WUI4 952 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ADGRE3Q9BY15 652 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 UBXN6Q9BZV1 441 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 C6orf62Q9GZU0 229 aaPredicted RBP13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 PAPOLBQ9NRJ5 636 aaKnown RBP13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 CALB2P22676 271 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 YWHAQP27348 245 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 GRK3P35626 688 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 HSPA13P48723 471 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 IRX1P78414 480 aaPredicted RBP13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 EPHX4Q8IUS5 362 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 TBCDQ9BTW9 1192 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 STARD7Q9NQZ5 370 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 NDOR1Q9UHB4 597 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 CDC42BPAQ5VT25 1732 aa13.9□□□□□ -0.18
CHRFAM7A-201ENST00000299847 PIPSLA2A3N6 862 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ZSCAN5DPP0CG00 497 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TMEM26Q6ZUK4 368 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CNPY3Q9BT09 278 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 RHBGQ9H310 441 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 STN1Q9H668 368 aaKnown RBP13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PAIP2BQ9ULR5 123 aaKnown RBP13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DUSP12Q9UNI6 340 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ATP6V1G2O95670 118 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 EGFRP00533 1210 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 GHRP10912 638 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 VCLP18206 1134 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CCR1P32246 355 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PEX5P50542 639 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TPGS1Q6ZTW0 290 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SV2AQ7L0J3 742 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TCP10LQ8TDR4 215 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SPRTNQ9H040 489 aaPredicted RBP13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 RIBC2Q9H4K1 309 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ANKZF1Q9H8Y5 726 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 BATF3Q9NR55 127 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 LNPEPQ9UIQ6 1025 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 INSRRP14616 1297 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ACADSP16219 412 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 COX10Q12887 443 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 FBXO47Q5MNV8 452 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 FAM171A1Q5VUB5 890 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 C16orf46Q6P387 395 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 GLT6D1Q7Z4J2 308 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DEFB132Q7Z7B7 95 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SAPCD2Q86UD0 394 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SYTL1Q8IYJ3 562 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ACTL9Q8TC94 416 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ACTRT1Q8TDG2 376 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 GTF3C2Q8WUA4 911 aaPredicted RBP13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SPACA7Q96KW9 195 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 C17orf75Q9HAS0 396 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TLR8Q9NR97 1041 aaKnown RBP13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DMGDHQ9UI17 866 aaKnown RBP13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 MADDQ8WXG6 1647 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 LACTBL1A8MY62 500 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 INPP4BO15327 924 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 HS6ST1O60243 411 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SEC22BO75396 215 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 RARGP13631 454 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 IFI35P80217 286 aaPredicted RBP13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 GRIK3Q13003 919 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TRIM71Q2Q1W2 868 aaKnown RBP13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TMC7Q7Z402 723 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ZNF438Q7Z4V0 828 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 LGI2Q8N0V4 545 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 GDPD5Q8WTR4 605 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 FAR2Q96K12 515 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DPY30Q9C005 99 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 RGS18Q9NS28 235 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 NUDT14O95848 222 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 NOS3P29474 1203 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SLC39A12Q504Y0 691 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 FGD3Q5JSP0 725 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 MCOLN2Q8IZK6 566 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DDX20Q9UHI6 824 aaKnown RBP13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PPIEQ9UNP9 301 aaKnown RBP13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PLA2G4CQ9UP65 541 aa13.89□□□□□ -0.19
CHRFAM7A-201ENST00000299847 KCNK1O00180 336 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TRIM32Q13049 653 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PLD1Q13393 1074 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CCDC126Q96EE4 140 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CAMKK2Q96RR4 588 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SYT15Q9BQS2 421 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DCUN1D5Q9BTE7 237 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 KCNQ5Q9NR82 932 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ERCC6L2Q5T890 1561 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DCDC2CA8MYV0 355 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 LHX1P48742 406 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TBX4P57082 545 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 NCF4Q15080 339 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PKN2Q16513 984 aaKnown RBP13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 UTS2BQ765I0 119 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms