RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 KCNT2Q6UVM3 1135 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 CHSY1Q86X52 802 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 FAM131BQ86XD5 332 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 MCUQ8NE86 351 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 TMEM176AQ96HP8 235 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 BCAP29Q9UHQ4 241 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 ZNF711Q9Y462 761 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 FARP1Q9Y4F1 1045 aaPredicted RBP13.8□□□□□ -0.2
SCAF4-201ENST00000286835 CNTNAP2Q9UHC6 1331 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 MAFGO15525 162 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 TBC1D12O60347 775 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 PYGLP06737 847 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 CYP2F1P24903 491 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 GSTA3Q16772 222 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 NR1H4Q96RI1 486 aaPredicted RBP13.79□□□□□ -0.2
SCAF4-201ENST00000286835 EURLQ9NYK6 297 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 TSPAN16Q9UKR8 245 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 DYNC1LI2O43237 492 aaPredicted RBP13.79□□□□□ -0.2
SCAF4-201ENST00000286835 HNRNPRO43390 633 aaKnown RBP13.79□□□□□ -0.2
SCAF4-201ENST00000286835 MAGEC1O60732 1142 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 GLRA3O75311 464 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 CYP2C8P10632 490 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 CPA3P15088 417 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 AVPR1AP37288 418 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 SLC12A2P55011 1212 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 ACAP1Q15027 740 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 ADAM32Q8TC27 787 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 RNF157Q96PX1 679 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 CDRT15Q96T59 188 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 EPAS1Q99814 870 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 TASP1Q9H6P5 420 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 SUDS3Q9H7L9 328 aaPredicted RBP13.79□□□□□ -0.2
SCAF4-201ENST00000286835 KCNK13Q9HB14 408 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 SSU72Q9NP77 194 aaKnown RBP13.79□□□□□ -0.2
SCAF4-201ENST00000286835 DMAP1Q9NPF5 467 aaPredicted RBP13.79□□□□□ -0.2
SCAF4-201ENST00000286835 ZNF358Q9NW07 568 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 BTBD7Q9P203 1132 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 MRPL42Q9Y6G3 142 aaKnown RBP13.79□□□□□ -0.2
SCAF4-201ENST00000286835 OR6B1O95007 311 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 VCLP18206 1134 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 POU5F1BQ06416 359 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 DLG1Q12959 904 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 CTC1Q2NKJ3 1217 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 KIF12Q96FN5 646 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 CAAP1Q9H8G2 361 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 EPS15L1Q9UBC2 864 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 HMGXB4Q9UGU5 601 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 SLC39A10Q9ULF5 831 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 C10orf71Q711Q0 1435 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 RNASEH1O60930 286 aaKnown RBP13.79□□□□□ -0.2
SCAF4-201ENST00000286835 MT-CO1P00395 513 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 MYL3P08590 195 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 NDST1P52848 882 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 LAMTOR4Q0VGL1 99 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 BOLA3Q53S33 107 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 CATSPER4Q7RTX7 472 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 SNX32Q86XE0 403 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 SEPT1Q8WYJ6 367 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 CPB2Q96IY4 423 aa13.79□□□□□ -0.2
SCAF4-201ENST00000286835 KCNK1O00180 336 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 CHADO15335 359 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 NFICP08651 508 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 GBE1Q04446 702 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 FOLH1Q04609 750 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 TBCCQ15814 346 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 NRF1Q16656 503 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 EEF1DP3Q658K8 133 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 OR52E8Q6IFG1 317 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 RBM44Q6ZP01 1051 aaKnown RBP13.78□□□□□ -0.2
SCAF4-201ENST00000286835 ACAD11Q709F0 780 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 KIAA0319LQ8IZA0 1049 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 GPRC5AQ8NFJ5 357 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 FRMD8P1Q9BZ68 369 aaPredicted RBP13.78□□□□□ -0.2
SCAF4-201ENST00000286835 HAPLN2Q9GZV7 340 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 SEMA6AQ9H2E6 1030 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 UBP1Q9NZI7 540 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 SIN3BO75182 1162 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 SRGAP2BP0DMP2 458 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 CDK7P50613 346 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 SH3BGRP55822 239 aaPredicted RBP13.78□□□□□ -0.2
SCAF4-201ENST00000286835 NOMO1Q15155 1222 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 SLC5A9Q2M3M2 681 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 SFT2D3Q587I9 215 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 FAM183BPQ6ZVS7 135 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 EGFL6Q8IUX8 553 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 CATSPER2Q96P56 530 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 MRPL1Q9BYD6 325 aaKnown RBP13.78□□□□□ -0.2
SCAF4-201ENST00000286835 NUF2Q9BZD4 464 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 RRAGCQ9HB90 399 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 KPNA7A9QM74 516 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 SERPINE1P05121 402 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 KCNA2P16389 499 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 FGFR3P22607 806 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 LY6KQ17RY6 165 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 XYLT1Q86Y38 959 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 WDTC1Q8N5D0 677 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 SNRNP25Q9BV90 132 aaKnown RBP13.78□□□□□ -0.2
SCAF4-201ENST00000286835 SPATA16Q9BXB7 569 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 B3GNT5Q9BYG0 378 aa13.78□□□□□ -0.2
SCAF4-201ENST00000286835 WDR55Q9H6Y2 383 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms