RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 TEX264Q9Y6I9 313 aa9.92□□□□□ -0.82
TRIM55-201ENST00000276573 TNFRSF10BO14763 440 aa9.91□□□□□ -0.82
TRIM55-201ENST00000276573 DCLK1O15075 740 aa9.91□□□□□ -0.82
TRIM55-201ENST00000276573 MFSD11O43934 449 aa9.91□□□□□ -0.82
TRIM55-201ENST00000276573 TADA2AO75478 443 aa9.91□□□□□ -0.82
TRIM55-201ENST00000276573 AMHP03971 560 aa9.91□□□□□ -0.82
TRIM55-201ENST00000276573 GRIK1P39086 918 aa9.91□□□□□ -0.82
TRIM55-201ENST00000276573 ELK3P41970 407 aa9.91□□□□□ -0.82
TRIM55-201ENST00000276573 NR1H3Q13133 447 aa9.91□□□□□ -0.82
TRIM55-201ENST00000276573 SYCP2LQ5T4T6 812 aa9.91□□□□□ -0.82
TRIM55-201ENST00000276573 FAXCQ5TGI0 409 aa9.91□□□□□ -0.82
TRIM55-201ENST00000276573 HEATR6Q6AI08 1181 aaKnown RBP9.91□□□□□ -0.82
TRIM55-201ENST00000276573 CAND1Q86VP6 1230 aaKnown RBP9.91□□□□□ -0.82
TRIM55-201ENST00000276573 DCP1BQ8IZD4 617 aaKnown RBP9.91□□□□□ -0.82
TRIM55-201ENST00000276573 MCUQ8NE86 351 aa9.91□□□□□ -0.82
TRIM55-201ENST00000276573 SCAMP5Q8TAC9 235 aa9.91□□□□□ -0.82
TRIM55-201ENST00000276573 ZNF473Q8WTR7 871 aaKnown RBP9.91□□□□□ -0.82
TRIM55-201ENST00000276573 HTR3CQ8WXA8 447 aa9.91□□□□□ -0.82
TRIM55-201ENST00000276573 UNC93B1Q9H1C4 597 aa9.91□□□□□ -0.82
TRIM55-201ENST00000276573 FETUBQ9UGM5 382 aa9.91□□□□□ -0.82
TRIM55-201ENST00000276573 PRG3Q9Y2Y8 225 aaPredicted RBP9.91□□□□□ -0.82
TRIM55-201ENST00000276573 TRIM17Q9Y577 477 aa9.91□□□□□ -0.82
TRIM55-201ENST00000276573 PCDHB7Q9Y5E2 793 aa9.91□□□□□ -0.82
TRIM55-201ENST00000276573 ACTL7BQ9Y614 415 aa9.91□□□□□ -0.82
TRIM55-201ENST00000276573 SF3B1O75533 1304 aaKnown RBP eCLIP9.91□□□□□ -0.82
TRIM55-201ENST00000276573 DNM1LO00429 736 aa9.9□□□□□ -0.82
TRIM55-201ENST00000276573 AVILO75366 819 aa9.9□□□□□ -0.82
TRIM55-201ENST00000276573 OR4Q2P0C623 313 aa9.9□□□□□ -0.82
TRIM55-201ENST00000276573 BRAFP15056 766 aa9.9□□□□□ -0.82
TRIM55-201ENST00000276573 VAV1P15498 845 aa9.9□□□□□ -0.82
TRIM55-201ENST00000276573 ATP2A2P16615 1042 aaKnown RBP9.9□□□□□ -0.82
TRIM55-201ENST00000276573 ERCC2P18074 760 aa9.9□□□□□ -0.82
TRIM55-201ENST00000276573 GLUD2P49448 558 aa9.9□□□□□ -0.82
TRIM55-201ENST00000276573 GEMIN4P57678 1058 aaKnown RBP9.9□□□□□ -0.82
TRIM55-201ENST00000276573 PDK1Q15118 436 aa9.9□□□□□ -0.82
TRIM55-201ENST00000276573 PRKD1Q15139 912 aaPredicted RBP9.9□□□□□ -0.82
TRIM55-201ENST00000276573 SLC39A12Q504Y0 691 aa9.9□□□□□ -0.82
TRIM55-201ENST00000276573 ANKRD20A2Q5SQ80 823 aa9.9□□□□□ -0.82
TRIM55-201ENST00000276573 ANKRD20A1Q5TYW2 823 aa9.9□□□□□ -0.82
TRIM55-201ENST00000276573 ANKRD20A3Q5VUR7 823 aa9.9□□□□□ -0.82
TRIM55-201ENST00000276573 FAM43BQ6ZT52 329 aaPredicted RBP9.9□□□□□ -0.82
TRIM55-201ENST00000276573 FBF1Q8TES7 1133 aa9.9□□□□□ -0.82
TRIM55-201ENST00000276573 CASD1Q96PB1 797 aa9.9□□□□□ -0.82
TRIM55-201ENST00000276573 LGMNQ99538 433 aa9.9□□□□□ -0.82
TRIM55-201ENST00000276573 TRIM62Q9BVG3 475 aa9.9□□□□□ -0.82
TRIM55-201ENST00000276573 KCNK9Q9NPC2 374 aa9.9□□□□□ -0.82
TRIM55-201ENST00000276573 ABCC13Q9NSE7 274 aa9.9□□□□□ -0.82
TRIM55-201ENST00000276573 A0A0A0MRY4 1105 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 TMEM120BA0PK00 339 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 EBAG9O00559 213 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 SYN3O14994 580 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 IGLV3-25P01717 112 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 ALDH2P05091 517 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 APRTP07741 180 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 TPSB2P20231 275 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 ZNF135P52742 658 aaPredicted RBP9.9□□□□□ -0.83
TRIM55-201ENST00000276573 YWHAGP61981 247 aaKnown RBP eCLIP9.9□□□□□ -0.83
TRIM55-201ENST00000276573 MTM1Q13496 603 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 EIF4EBP2Q13542 120 aaPredicted RBP9.9□□□□□ -0.83
TRIM55-201ENST00000276573 MPP2Q14168 576 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 MRPL58Q14197 206 aaKnown RBP9.9□□□□□ -0.83
TRIM55-201ENST00000276573 TMED2Q15363 201 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 TPSAB1Q15661 275 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 PKN2Q16513 984 aaKnown RBP9.9□□□□□ -0.83
TRIM55-201ENST00000276573 NFE2Q16621 373 aaPredicted RBP9.9□□□□□ -0.83
TRIM55-201ENST00000276573 ARHGEF18Q6ZSZ5 1173 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 PDZD4Q76G19 769 aaPredicted RBP9.9□□□□□ -0.83
TRIM55-201ENST00000276573 TAC4Q86UU9 113 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 TRABD2AQ86V40 505 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 SRRM1Q8IYB3 904 aaKnown RBP9.9□□□□□ -0.83
TRIM55-201ENST00000276573 VPS52Q8N1B4 723 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 AGGF1Q8N302 714 aaeCLIP9.9□□□□□ -0.83
TRIM55-201ENST00000276573 NETO2Q8NC67 525 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 DQX1Q8TE96 717 aaKnown RBP9.9□□□□□ -0.83
TRIM55-201ENST00000276573 SEPT8Q92599 483 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 P2RY11Q96G91 374 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 SPATA13Q96N96 652 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 ZMYND15Q9H091 742 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 TKTL2Q9H0I9 626 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 OSBPL2Q9H1P3 480 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 PRDM12Q9H4Q4 367 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 CCDC134Q9H6E4 229 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 ACSS3Q9H6R3 686 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 SAGE1Q9NXZ1 904 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 OR12D3Q9UGF7 316 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 CHMP2BQ9UQN3 213 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 NR2E3Q9Y5X4 410 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 RAD54BQ9Y620 910 aa9.9□□□□□ -0.83
TRIM55-201ENST00000276573 RASA4BC9J798 803 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 PITPNM1O00562 1244 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 PPP1R12AO14974 1030 aaPredicted RBP9.89□□□□□ -0.83
TRIM55-201ENST00000276573 RASA4O43374 803 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 DRD4P21917 467 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 FDFT1P37268 417 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 SLC5A3P53794 718 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 TPI1P60174 286 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 HTRA3P83110 453 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 AP1B1Q10567 949 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 SEMA5AQ13591 1074 aa9.89□□□□□ -0.83
TRIM55-201ENST00000276573 TCTN1Q2MV58 587 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms