RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 CHRNB1P11230 501 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 EIF2AK2P19525 551 aaKnown RBP16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 ARSEP51690 589 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 PRELPP51888 382 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 MAPK10P53779 464 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 ADAM17P78536 824 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 TEX44Q53QW1 395 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 SH2D5Q6ZV89 423 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 FAM160B2Q86V87 743 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 SNX29P2Q8IUI4 249 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 COG8Q96MW5 612 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 SH2D3AQ9BRG2 576 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 WDR11Q9BZH6 1224 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 DNPEPQ9ULA0 475 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 PPME1Q9Y570 386 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 H3BNH8 94 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 I3L4J1 428 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 HOXA7P31268 230 aaPredicted RBP16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 SLC1A1P43005 524 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 FAAP100Q0VG06 881 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 KAZNQ674X7 775 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 RFPL4BQ6ZWI9 263 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 TRMT1LQ7Z2T5 733 aaKnown RBP16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 C11orf74Q86VG3 221 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 GABPB2Q8TAK5 448 aaPredicted RBP16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 CLEC4DQ8WXI8 215 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 APOL6Q9BWW8 343 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 ANAPC7Q9UJX3 599 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 CDH7Q9ULB5 785 aa16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 RBBP6Q7Z6E9 1792 aaKnown RBP16.19■□□□□ 0.18
CTDSP1-201ENST00000273062 PSMD11O00231 422 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 SLC16A3O15427 465 aaKnown RBP16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 SLC26A4O43511 780 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 CHEK2O96017 543 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 IL1BP01584 269 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 CYP1A2P05177 515 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 ICAM1P05362 532 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 ENO2P09104 434 aaPredicted RBP16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 PTPN2P17706 415 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 EIF3EP60228 445 aaKnown RBP16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 OTUD4Q01804 1114 aaKnown RBP16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 FER1L6Q2WGJ9 1857 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 TRIM16LQ309B1 348 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 ZNF394Q53GI3 561 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 FNBP1LQ5T0N5 605 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 C1orf186Q6ZWK4 172 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 GPR141Q7Z602 305 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 RSPH3Q86UC2 560 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 SLC47A2Q86VL8 602 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 CCDC33Q8N5R6 958 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 MYCT1Q8N699 235 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 C7orf26Q96N11 449 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 HIPK3Q9H422 1215 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 PARVBQ9HBI1 364 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 GPSM3Q9Y4H4 160 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 GJA3Q9Y6H8 435 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 FAM155BO75949 473 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 MICALL2Q8IY33 904 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 RDH13Q8NBN7 331 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 EPS8L1Q8TE68 723 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 ZNF778Q96MU6 729 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 SENP7Q9BQF6 1050 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 GCOM2Q9BZD3 368 aaPredicted RBP16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 SCINQ9Y6U3 715 aa16.18■□□□□ 0.18
CTDSP1-201ENST00000273062 NAT2P11245 290 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 P4HA1P13674 534 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 JAK1P23458 1154 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 GMPSP49915 693 aaPredicted RBP16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 MLLT10P55197 1068 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 ZBTB17Q13105 803 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 NBPF12Q5TAG4 269 aaPredicted RBP16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 ANKRD22Q5VYY1 191 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 ZNF280DQ6N043 979 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 UTS2BQ765I0 119 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 IGFN1Q86VF2 1251 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 ELMO3Q96BJ8 720 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 FAR2Q96K12 515 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 EGLN2Q96KS0 407 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 NLRP4Q96MN2 994 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 LXNQ9BS40 222 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 SNX25Q9H3E2 840 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 GNPTGQ9UJJ9 305 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 CFAP99D6REC4 459 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 CSDE1O75534 798 aaKnown RBP16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 LYPLA1O75608 230 aaPredicted RBP16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 TOP3BO95985 862 aaKnown RBP16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 CD58P19256 250 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 MYL7Q01449 175 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 SELENBP1Q13228 472 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 GPR107Q5VW38 600 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 ANKRD26P1Q6NSI1 321 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 TMEM26Q6ZUK4 368 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 PHTF2Q8N3S3 785 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 FIBCD1Q8N539 461 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 CPSF7Q8N684 471 aaKnown RBP16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 RNF148Q8N7C7 305 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 LMO3Q8TAP4 145 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 E2F7Q96AV8 911 aa16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 ALKBH8Q96BT7 664 aaKnown RBP16.17■□□□□ 0.18
CTDSP1-201ENST00000273062 INO80BQ9C086 356 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms