RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 RHOAP61586 193 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 CCNG2Q16589 344 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 CEP85LQ5SZL2 805 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 KDELC2Q7Z4H8 507 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 SCAMP5Q8TAC9 235 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 ZBTB9Q96C00 473 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 DDX23Q9BUQ8 820 aaKnown RBP8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 PARD6BQ9BYG5 372 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 RHOBTB2Q9BYZ6 727 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 ZYG11BQ9C0D3 744 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 PNPLA8Q9NP80 782 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 CLUHO75153 1309 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 SIPA1L1O43166 1804 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 TRIM43BA6NCK2 446 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 M0QZQ0 153 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 SCAMP3O14828 347 aaKnown RBP8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 PER2O15055 1255 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 TTI1O43156 1089 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 HCRTO43612 131 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 RNASEH1O60930 286 aaKnown RBP8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 LUC7L3O95232 432 aaKnown RBP8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 ITIH2P19823 946 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 FDFT1P37268 417 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 RENBPP51606 427 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 GEMP55040 296 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 PRAMEP78395 509 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 ZBTB6Q15916 424 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 RTP2Q5QGT7 225 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 MARC1Q5VT66 337 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 EMBQ6PCB8 327 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 RNF19BQ6ZMZ0 732 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 C16orf59Q7L2K0 433 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 TMEM110Q86TL2 294 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 ZNF598Q86UK7 904 aaKnown RBP8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 TDRD5Q8NAT2 981 aaKnown RBP8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 KCNN1Q92952 543 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 TRIM43Q96BQ3 446 aaPredicted RBP8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 FAM161BQ96MY7 647 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 RBM12Q9NTZ6 932 aaKnown RBP8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 PCDHA11Q9Y5I1 949 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 YJEFN3A6XGL0 299 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 E7ENQ6 273 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 MDM4O15151 490 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 SYNCRIPO60506 623 aaKnown RBP8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 CXCL10P02778 98 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 PYGMP11217 842 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 SP100P23497 879 aaPredicted RBP8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 SESN2P58004 480 aaPredicted RBP8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 MLLT1Q03111 559 aaPredicted RBP8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 C1orf53Q5VUE5 145 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 NAPEPLDQ6IQ20 393 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 JAMLQ86YT9 394 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 ARL14EPQ8N8R7 260 aaPredicted RBP8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 FCRL2Q96LA5 508 aaPredicted RBP8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 C2orf49Q9BVC5 232 aaPredicted RBP8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 TLR10Q9BXR5 811 aa8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 TPX2Q9ULW0 747 aaKnown RBP8.54□□□□□ -1.04
GTF3C3-201ENST00000263956 CCDC151A5D8V7 595 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 RCCD1A6NED2 376 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 MSI1O43347 362 aaKnown RBP8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 LCA5LO95447 670 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 ARHGEF7Q14155 803 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 STARD3Q14849 445 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 PCSK7Q16549 785 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 TMEM240Q5SV17 173 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 ZNF771Q7L3S4 317 aaPredicted RBP8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 IPMKQ8NFU5 416 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 SLC35F5Q8WV83 523 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 ING5Q8WYH8 240 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 ATG4AQ8WYN0 398 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 SMOQ99835 787 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 BBS2Q9BXC9 721 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 RBM22Q9NW64 420 aaKnown RBP eCLIP8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 MAFFQ9ULX9 164 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 TBC1D3BA6NDS4 549 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 ABLIM1O14639 778 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 GIPC1O14908 333 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 TEX28O15482 410 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 ATP9BO43861 1147 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 TBL1XO60907 577 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 ADH1CP00326 375 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 POLR2EP19388 210 aaKnown RBP8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 PDIA2Q13087 525 aaKnown RBP8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 TRIP4Q15650 581 aaPredicted RBP8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 CHRDL2Q6WN34 429 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 OR6P1Q8NGX9 317 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 SKA2Q8WVK7 121 aaPredicted RBP8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 TEKT4Q8WW24 435 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 LRRC1Q9BTT6 524 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 ZMYND15Q9H091 742 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 BRD9Q9H8M2 597 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 CPQQ9Y646 472 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 CES2O00748 559 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 PAGE1O75459 146 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 ALDH3A1P30838 453 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 CORO1AP31146 461 aaKnown RBP8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 RAB33AQ14088 237 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 HIF1AQ16665 826 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 HHATQ5VTY9 493 aa8.53□□□□□ -1.04
GTF3C3-201ENST00000263956 LINC00523Q86TU6 105 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms