RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 PPP3CCP48454 512 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 ARSEP51690 589 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 EPHA5P54756 1037 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 ZXDBP98169 803 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 ADAM15Q13444 863 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 CBX2Q14781 532 aaPredicted RBP10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 TRIP4Q15650 581 aaPredicted RBP10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 KCTD19Q17RG1 926 aaPredicted RBP10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 PABPC1LQ4VXU2 614 aaKnown RBP10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 PRSS36Q5K4E3 855 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 PRPF38BQ5VTL8 546 aaKnown RBP10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 KAZNQ674X7 775 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 SYCE2Q6PIF2 218 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 SPOCD1Q6ZMY3 1216 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 PDZD4Q76G19 769 aaPredicted RBP10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 RTL10Q7L3V2 364 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 POLNQ7Z5Q5 900 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 RCOR2Q8IZ40 523 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 ZDHHC14Q8IZN3 488 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 ST13P5Q8NFI4 369 aaPredicted RBP10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 CMASQ8NFW8 434 aaPredicted RBP10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 EXD1Q8NHP7 514 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 ITFG1Q8TB96 612 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 MRPS31Q92665 395 aaKnown RBP10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 PPP2R3CQ969Q6 453 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 SLC39A13Q96H72 371 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 ZSWIM3Q96MP5 696 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 SERPINB11Q96P15 392 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 CALN1Q9BXU9 219 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 KRTAP3-3Q9BYR6 98 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 KRTAP3-2Q9BYR7 98 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 SIK2Q9H0K1 926 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 CARD9Q9H257 536 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 PCDH18Q9HCL0 1135 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 ARHGEF38Q9NXL2 777 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 DDX56Q9NY93 547 aaKnown RBP10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 CLEC1BQ9P126 229 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 DPP7Q9UHL4 492 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 TLR6Q9Y2C9 796 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 NR2E1Q9Y466 385 aa10.1□□□□□ -0.79
SNRNP40-201ENST00000263694 GOLGA6L7A0A1B0GV03 622 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 KCNU1A8MYU2 1149 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 CREB3O43889 395 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 PAGE1O75459 146 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 FGGP02679 453 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 CEBPBP17676 345 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 IL4RP24394 825 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 CDC25CP30307 473 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 CCR1P32246 355 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 CDKN2BP42772 138 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 DPYSL3Q14195 570 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 KRT81Q14533 505 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 GPR158Q5T848 1215 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 SEL1L2Q5TEA6 688 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 ANKRD54Q6NXT1 300 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 C14orf80Q86SX3 495 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 RASGEF1CQ8N431 466 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 ZNF276Q8N554 614 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 TEKT4Q8WW24 435 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 ZFRQ96KR1 1074 aaKnown RBP10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 GCNAQ96QF7 691 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 FAM118BQ9BPY3 351 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 CARD6Q9BX69 1037 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 KLF16Q9BXK1 252 aaPredicted RBP10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 AP1M1Q9BXS5 423 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 SFXN1Q9H9B4 322 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 CLDND1Q9NY35 253 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 MFHAS1Q9Y4C4 1052 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 CPQQ9Y646 472 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 hCG_1818297A0A087WSY0 165 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 TBX10O75333 385 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 STC2O76061 302 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 IGLV3-27P01718 113 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 KLKB1P03952 638 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 SRGAP2BP0DMP2 458 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 GOT1P17174 413 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 AMPD1P23109 780 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 TUBP50607 506 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 DYNLT1P63172 113 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 PPP2R5DQ14738 602 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 CCDC85BQ15834 202 aaPredicted RBP10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 CLUL1Q15846 466 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 DPYSL2Q16555 572 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 LONRF2Q1L5Z9 754 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 ARL13BQ3SXY8 428 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 ODF2Q5BJF6 829 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 EFHC2Q5JST6 749 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 PIK3R6Q5UE93 754 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 ELMSAN1Q6PJG2 1045 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 TMEM184AQ6ZMB5 413 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 TADA2BQ86TJ2 420 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 DENND1CQ8IV53 801 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 NETO2Q8NC67 525 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 ADAMTS19Q8TE59 1207 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 NTAN1Q96AB6 310 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 CDK5RAP1Q96SZ6 601 aaKnown RBP10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 NCAPGQ9BPX3 1015 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 OSBPL8Q9BZF1 889 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 SLITRK6Q9H5Y7 841 aa10.09□□□□□ -0.79
SNRNP40-201ENST00000263694 L2HGDHQ9H9P8 463 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms